PDB Chemical Component NOS
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for NOS
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
C2 |
1.368 |
1.357 |
N1 |
C6 |
1.382 |
1.352 |
C2 |
N3 |
1.328 |
1.303 |
O6 |
C6 |
1.230 |
1.219 |
C6 |
C5 |
1.408 |
1.417 |
N3 |
C4 |
1.365 |
1.341 |
O2' |
C2' |
1.451 |
1.429 |
C5 |
C4 |
1.378 |
1.398 |
C5 |
N7 |
1.375 |
1.354 |
C4 |
N9 |
1.377 |
1.367 |
N7 |
C8 |
1.359 |
1.302 |
N9 |
C8 |
1.359 |
1.363 |
N9 |
C1' |
1.545 |
1.465 |
C1' |
C2' |
1.558 |
1.550 |
C1' |
O4' |
1.440 |
1.444 |
C2' |
C3' |
1.568 |
1.551 |
O4' |
C4' |
1.449 |
1.438 |
C3' |
O3' |
1.473 |
1.429 |
C3' |
C4' |
1.513 |
1.541 |
C4' |
C5' |
1.516 |
1.530 |
C5' |
O5' |
1.446 |
1.429 |
C2 |
H1 |
1.080 |
1.080 |
N1 |
H2 |
1.000 |
0.970 |
C8 |
H3 |
1.080 |
1.080 |
C5' |
H4 |
1.100 |
1.090 |
C5' |
H5 |
1.101 |
1.090 |
O5' |
H6 |
0.950 |
0.967 |
C4' |
H7 |
1.101 |
1.089 |
C1' |
H8 |
1.100 |
1.090 |
C2' |
H9 |
1.100 |
1.090 |
O2' |
H10 |
0.950 |
0.967 |
C3' |
H11 |
1.100 |
1.090 |
O3' |
H12 |
0.950 |
0.967 |
Bond Angles for NOS
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N1 |
C2 |
H1 |
118.2 |
118.9 |
N1 |
C6 |
C5 |
112.1 |
118.2 |
C6 |
N1 |
H2 |
117.3 |
119.8 |
O6 |
C6 |
C5 |
128.2 |
120.9 |
C6 |
C5 |
N7 |
129.4 |
134.3 |
O2' |
C2' |
C3' |
109.8 |
110.9 |
O2' |
C2' |
H9 |
110.7 |
110.8 |
C5 |
N7 |
C8 |
106.8 |
109.3 |
C4 |
N9 |
C8 |
112.4 |
107.5 |
C4 |
N9 |
C1' |
126.8 |
126.3 |
N9 |
C8 |
N7 |
106.8 |
109.8 |
N7 |
C8 |
H3 |
126.6 |
125.1 |
C8 |
N9 |
C1' |
120.6 |
126.2 |
N9 |
C8 |
H3 |
126.6 |
125.2 |
N9 |
C1' |
C2' |
118.9 |
110.6 |
N9 |
C1' |
O4' |
110.0 |
110.6 |
N9 |
C1' |
H8 |
107.1 |
110.5 |
C1' |
C2' |
C3' |
107.5 |
102.2 |
C2' |
C1' |
H8 |
107.0 |
110.6 |
C1' |
C2' |
H9 |
109.2 |
110.9 |
C2' |
C3' |
O3' |
112.4 |
110.5 |
C3' |
C2' |
H9 |
109.1 |
111.0 |
C2' |
C3' |
H11 |
108.9 |
110.5 |
O4' |
C4' |
H7 |
109.3 |
109.9 |
O3' |
C3' |
H11 |
110.2 |
110.5 |
C3' |
O3' |
H12 |
109.5 |
114.0 |
C3' |
C4' |
H7 |
108.5 |
109.9 |
C4' |
C5' |
H4 |
110.1 |
109.5 |
C4' |
C5' |
H5 |
110.1 |
109.5 |
O5' |
C5' |
H4 |
110.1 |
109.4 |
O5' |
C5' |
H5 |
110.1 |
109.5 |
C5' |
O5' |
H6 |
109.5 |
114.0 |
H4 |
C5' |
H5 |
109.5 |
109.5 |
Torsion Angles for NOS
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
N1 |
C2 |
H1 |
180.1 |
180.1 |
O6 |
C6 |
N1 |
C5 |
177.4 |
180.0 |
N1 |
C6 |
C5 |
N7 |
180.0 |
180.0 |
N1 |
C6 |
O6 |
C5 |
183.0 |
180.0 |
O6 |
C6 |
N1 |
H2 |
357.0 |
0.0 |
O6 |
C6 |
C5 |
N7 |
2.8 |
0.1 |
C5 |
C6 |
N1 |
H2 |
179.5 |
180.1 |
C6 |
C5 |
N7 |
C8 |
180.7 |
180.0 |
N3 |
C4 |
N9 |
C8 |
180.0 |
179.9 |
N3 |
C4 |
N9 |
C1' |
5.4 |
359.7 |
C1' |
C2' |
O2' |
C3' |
241.6 |
247.3 |
O2' |
C2' |
C1' |
H8 |
1.4 |
36.6 |
C1' |
C2' |
O2' |
H9 |
121.1 |
123.5 |
O2' |
C2' |
C3' |
O3' |
349.3 |
339.6 |
C3' |
C2' |
O2' |
H9 |
239.5 |
236.3 |
O2' |
C2' |
C3' |
H11 |
111.7 |
102.2 |
C5 |
C4 |
N9 |
C8 |
0.9 |
0.0 |
C5 |
C4 |
N9 |
C1' |
186.4 |
179.7 |
N9 |
C8 |
N7 |
C5 |
0.4 |
360.0 |
C5 |
N7 |
C8 |
H3 |
180.4 |
180.3 |
C4 |
N9 |
C8 |
N7 |
359.2 |
0.0 |
C8 |
N9 |
C4 |
C1' |
174.6 |
180.3 |
C4 |
N9 |
C8 |
H3 |
179.1 |
179.6 |
C4 |
N9 |
C1' |
C2' |
12.2 |
85.3 |
C4 |
N9 |
C1' |
O4' |
133.1 |
199.4 |
C4 |
N9 |
C1' |
H8 |
250.8 |
322.5 |
N7 |
C8 |
N9 |
C1' |
174.1 |
180.3 |
N9 |
C8 |
N7 |
H3 |
180.0 |
179.6 |
C5 |
N7 |
C8 |
N9 |
0.4 |
360.0 |
C4 |
N9 |
C8 |
C1' |
185.0 |
179.7 |
N7 |
C8 |
N9 |
H3 |
180.0 |
180.4 |
C8 |
N9 |
C1' |
C2' |
198.0 |
265.0 |
C8 |
N9 |
C1' |
O4' |
318.9 |
19.0 |
C8 |
N9 |
C1' |
H8 |
76.7 |
142.1 |
C4 |
N9 |
C1' |
C8 |
174.2 |
180.3 |
C1' |
N9 |
C8 |
N7 |
174.1 |
180.3 |
C1' |
N9 |
C8 |
H3 |
354.1 |
359.9 |
N9 |
C1' |
C2' |
C3' |
120.2 |
155.6 |
C2' |
C1' |
N9 |
H8 |
121.3 |
122.8 |
N9 |
C1' |
C2' |
H9 |
2.0 |
37.3 |
O2' |
C2' |
C1' |
C3' |
119.8 |
118.2 |
O2' |
C2' |
C1' |
H9 |
238.0 |
236.5 |
N9 |
C1' |
C2' |
O4' |
123.5 |
118.5 |
N9 |
C1' |
C2' |
H8 |
238.6 |
237.2 |
C1' |
C2' |
C3' |
O3' |
109.5 |
97.8 |
C3' |
C2' |
C1' |
H9 |
118.2 |
118.3 |
C1' |
C2' |
C3' |
H11 |
231.9 |
220.4 |
N9 |
C1' |
O4' |
C2' |
231.0 |
241.5 |
N9 |
C1' |
O4' |
H8 |
116.9 |
122.9 |
C1' |
O4' |
C4' |
H7 |
213.4 |
267.0 |
O2' |
C2' |
C3' |
H9 |
121.5 |
123.6 |
C3' |
C2' |
C1' |
H8 |
241.6 |
278.4 |
C1' |
C2' |
C3' |
H9 |
241.7 |
241.8 |
O3' |
C3' |
C2' |
H11 |
237.6 |
237.4 |
C2' |
C3' |
O3' |
H12 |
180.0 |
180.1 |
C2' |
C3' |
C4' |
H7 |
142.8 |
117.5 |
N9 |
C1' |
O4' |
C4' |
250.0 |
201.4 |
C3' |
C4' |
O4' |
H7 |
118.1 |
119.5 |
O4' |
C4' |
C5' |
H4 |
176.0 |
306.7 |
O4' |
C4' |
C5' |
H5 |
296.8 |
186.7 |
O3' |
C3' |
C2' |
H9 |
227.8 |
216.0 |
C2' |
C3' |
O3' |
H11 |
121.7 |
122.6 |
O3' |
C3' |
C4' |
H7 |
21.7 |
358.9 |
O4' |
C4' |
C3' |
H7 |
241.3 |
240.5 |
C3' |
C4' |
C5' |
H4 |
296.5 |
64.7 |
C3' |
C4' |
C5' |
H5 |
57.3 |
304.7 |
O5' |
C5' |
C4' |
H4 |
240.4 |
120.0 |
O5' |
C5' |
C4' |
H5 |
119.6 |
240.0 |
C4' |
C5' |
O5' |
H6 |
180.0 |
179.9 |
H4 |
C5' |
C4' |
H5 |
239.2 |
120.0 |
C4' |
C5' |
O5' |
H4 |
119.6 |
240.0 |
C4' |
C5' |
O5' |
H5 |
240.4 |
120.0 |
H4 |
C5' |
O5' |
H5 |
120.8 |
240.0 |
H2 |
N1 |
C2 |
H1 |
0.0 |
0.0 |
H2 |
N1 |
C6 |
C5 |
179.5 |
180.1 |
N9 |
C8 |
H3 |
N7 |
180.0 |
180.4 |
H3 |
C8 |
N9 |
C1' |
354.1 |
359.9 |
C4' |
C5' |
H4 |
H5 |
121.1 |
240.0 |
O5' |
C5' |
H4 |
H5 |
238.9 |
120.0 |
H4 |
C5' |
O5' |
H6 |
60.4 |
299.9 |
C4' |
C5' |
H5 |
H4 |
238.9 |
120.0 |
O5' |
C5' |
H5 |
H4 |
121.1 |
240.0 |
H5 |
C5' |
O5' |
H6 |
299.6 |
59.9 |
H6 |
O5' |
C5' |
H4 |
60.4 |
299.9 |
H6 |
O5' |
C5' |
H5 |
299.6 |
59.9 |
H7 |
C4' |
C5' |
H4 |
58.1 |
185.7 |
H7 |
C4' |
C5' |
H5 |
178.9 |
65.7 |
N9 |
C1' |
H8 |
C2' |
128.6 |
122.9 |
N9 |
C1' |
H8 |
O4' |
241.3 |
237.0 |
H8 |
C1' |
C2' |
C3' |
241.6 |
278.4 |
H8 |
C1' |
C2' |
H9 |
123.4 |
160.1 |
O2' |
C2' |
H9 |
C3' |
239.1 |
236.4 |
C1' |
C2' |
H9 |
C3' |
117.2 |
112.8 |
H9 |
C2' |
C1' |
H8 |
123.4 |
160.1 |
H9 |
C2' |
C3' |
O3' |
227.8 |
216.0 |
H9 |
C2' |
C3' |
H11 |
350.2 |
338.6 |
H10 |
O2' |
C2' |
C3' |
298.4 |
292.7 |
H10 |
O2' |
C2' |
H9 |
58.9 |
56.4 |
C2' |
C3' |
H11 |
O3' |
236.2 |
237.4 |
H11 |
C3' |
C2' |
H9 |
350.2 |
338.6 |
H11 |
C3' |
O3' |
H12 |
58.3 |
57.4 |
H11 |
C3' |
C4' |
H7 |
258.0 |
236.2 |
H12 |
O3' |
C3' |
H11 |
58.3 |
57.4 |