PDB Chemical Component NOM

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NOM

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.384	1.388
C1	C6	1.387	1.378
C1	HC1	1.103	1.080
C2	C3	1.391	1.388
C2	HC2	1.103	1.080
C3	C4	1.402	1.407
C3	C10	1.430	1.522
C4	C5	1.394	1.397
C4	C7	1.437	1.471
C5	C6	1.392	1.395
C5	O2	1.377	1.356
C6	HC6	1.103	1.081
C10	C9	1.433	1.472
C10	O4	1.229	1.215
C9	C8	1.408	1.369
C9	C13	1.395	1.488
C8	C7	1.444	1.481
C8	C11	1.381	1.506
C7	O3	1.219	1.216
O2	HO2	0.950	0.967
C13	C14	1.548	1.560
C13	O6	1.701	1.441
C13	HC13	1.115	1.089
C14	O1	1.390	1.409
C14	C15	1.513	1.535
C14	HC14	1.115	1.090
O1	C11	1.418	1.429
C11	C12	1.507	1.531
C11	HC11	1.115	1.090
C12	H121	1.115	1.090
C12	H122	1.115	1.090
C12	H123	1.115	1.090
C15	C16	1.553	1.530
C15	H151	1.115	1.090
C15	H152	1.115	1.091
C16	O5	1.240	1.208
C16	O6	1.239	1.358

Bond Angles for NOM

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	119.8	120.5
C2	C1	HC1	120.0	119.8
C1	C2	C3	119.1	119.9
C1	C2	HC2	120.2	120.0
C6	C1	HC1	120.2	119.7
C1	C6	C5	120.5	120.4
C1	C6	HC6	119.6	119.8
C3	C2	HC2	120.7	120.1
C2	C3	C4	122.6	120.0
C2	C3	C10	120.1	119.7
C4	C3	C10	117.3	120.3
C3	C4	C5	116.8	119.6
C3	C4	C7	121.7	119.5
C3	C10	C9	121.3	117.1
C3	C10	O4	122.2	120.0
C5	C4	C7	121.5	120.9
C4	C5	C6	121.2	119.6
C4	C5	O2	119.5	120.2
C4	C7	C8	121.2	120.6
C4	C7	O3	122.9	119.7
C6	C5	O2	119.3	120.2
C5	C6	HC6	119.9	119.8
C5	O2	HO2	119.5	106.8
C9	C10	O4	116.5	122.9
C10	C9	C8	122.0	123.0
C10	C9	C13	117.1	121.3
C8	C9	C13	120.9	115.7
C9	C8	C7	116.5	119.5
C9	C8	C11	119.7	123.2
C9	C13	C14	114.3	106.7
C9	C13	O6	143.9	119.9
C9	C13	HC13	60.1	109.3
C7	C8	C11	123.8	117.3
C8	C7	O3	115.9	119.7
C8	C11	O1	123.4	114.3
C8	C11	C12	123.5	108.5
C8	C11	HC11	69.1	108.5
C14	C13	O6	100.5	103.0
C14	C13	HC13	156.7	108.0
C13	C14	O1	117.3	105.6
C13	C14	C15	108.0	98.8
C13	C14	HC14	108.1	111.5
O6	C13	HC13	91.2	109.3
C13	O6	C16	106.7	109.7
O1	C14	C15	116.9	117.7
O1	C14	HC14	96.9	111.2
C14	O1	C11	114.8	105.5
C15	C14	HC14	108.7	111.2
C14	C15	C16	102.3	101.3
C14	C15	H151	114.9	111.1
C14	C15	H152	114.9	111.0
O1	C11	C12	110.9	108.5
O1	C11	HC11	108.9	108.6
C12	C11	HC11	108.5	108.4
C11	C12	H121	107.2	109.4
C11	C12	H122	123.5	109.5
C11	C12	H123	107.2	109.4
H121	C12	H122	107.3	109.5
H121	C12	H123	102.5	109.5
H122	C12	H123	107.2	109.5
C16	C15	H151	115.0	111.1
C16	C15	H152	115.0	111.1
C15	C16	O5	117.8	125.4
C15	C16	O6	118.2	109.1
H151	C15	H152	95.5	110.9
O5	C16	O6	124.0	125.5

Torsion Angles for NOM

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C6	C1	C2	HC1	180.0	180.0
C2	C1	C6	C5	2.2	0.1
C2	C1	C6	HC6	182.1	180.2
C3	C2	C1	HC2	180.0	180.0
C1	C2	C3	C4	0.5	359.8
C1	C2	C3	C10	180.5	179.1
C2	C1	C6	HC1	180.0	180.0
C6	C1	C2	C3	358.5	0.0
C6	C1	C2	HC2	178.4	180.0
C4	C5	C6	C1	358.3	0.0
C1	C6	C5	O2	177.4	180.0
C5	C6	C1	HC6	180.0	179.9
C2	C1	HC1	C6	180.0	180.0
HC1	C1	C2	C3	178.5	180.0
HC1	C1	C2	HC2	358.4	360.0
HC1	C1	C6	C5	182.2	180.1
HC1	C1	C6	HC6	2.2	0.2
C3	C2	C1	C6	358.5	0.0
C3	C2	C1	HC1	178.5	180.0
C1	C2	C3	HC2	180.0	180.0
C4	C3	C2	C10	180.0	180.8
C2	C3	C4	C5	360.0	0.3
C2	C3	C4	C7	179.7	180.2
C2	C3	C10	C9	180.0	179.3
C2	C3	C10	O4	0.1	0.0
HC2	C2	C1	C6	178.4	180.0
HC2	C2	C1	HC1	358.4	360.0
C1	C2	HC2	C3	180.0	180.0
HC2	C2	C3	C4	180.5	179.8
HC2	C2	C3	C10	0.5	359.1
C4	C3	C2	HC2	180.5	179.8
C2	C3	C4	C10	180.0	179.2
C4	C3	C10	C9	0.0	358.6
C4	C3	C10	O4	180.1	179.2
C5	C4	C3	C7	180.3	180.1
C3	C4	C5	C6	0.6	359.8
C3	C4	C5	O2	181.5	179.8
C3	C4	C7	C8	0.4	0.1
C3	C4	C7	O3	179.8	180.0
C10	C3	C2	HC2	0.5	359.1
C2	C3	C10	C4	180.0	180.8
C10	C3	C4	C5	180.0	181.1
C10	C3	C4	C7	359.7	1.0
C9	C10	C3	O4	179.9	179.3
C3	C10	C9	C8	0.2	0.8
C3	C10	C9	C13	179.7	180.1
C1	C6	C5	C4	358.3	0.0
C5	C4	C3	C10	180.0	181.1
C3	C4	C5	C7	179.7	179.9
C5	C4	C7	C8	180.1	180.0
C5	C4	C7	O3	359.5	360.0
C6	C5	C4	O2	179.2	179.9
C4	C5	C6	HC6	178.3	180.0
C4	C5	O2	HO2	180.0	90.0
C7	C4	C3	C10	359.7	1.0
C3	C4	C7	C5	180.3	180.1
C7	C4	C5	C6	180.9	179.9
C7	C4	C5	O2	1.8	359.9
C9	C8	C7	C4	359.9	359.3
C4	C7	C8	C11	179.6	178.8
C8	C7	C4	O3	180.5	180.0
C5	C6	C1	HC1	182.2	180.1
C1	C6	C5	HC6	180.0	180.1
C6	C5	C4	C7	180.9	179.9
C4	C5	C6	O2	180.8	180.1
C6	C5	O2	HO2	0.8	270.0
O2	C5	C4	C7	1.8	359.9
C4	C5	O2	C6	179.2	179.9
O2	C5	C6	HC6	357.4	359.9
HC6	C6	C1	HC1	2.2	0.2
C1	C6	HC6	C5	180.0	179.9
HC6	C6	C5	O2	357.4	359.9
C3	C10	C9	O4	180.1	180.7
C8	C9	C10	C13	180.5	180.7
C10	C9	C8	C7	359.8	0.2
C10	C9	C8	C11	180.1	180.7
C10	C9	C13	C14	163.9	150.6
C10	C9	C13	O6	0.1	34.3
C10	C9	C13	HC13	318.4	267.2
C3	C10	O4	C9	179.9	179.3
O4	C10	C9	C8	180.1	180.1
O4	C10	C9	C13	359.6	359.4
C4	C7	C8	C9	359.9	359.3
C8	C9	C10	O4	180.1	180.1
C10	C9	C8	C13	179.5	179.3
C8	C9	C13	C14	343.4	329.9
C8	C9	C13	O6	179.6	213.6
C8	C9	C13	HC13	137.9	86.5
C7	C8	C9	C11	179.7	179.5
C9	C8	C7	O3	180.4	179.3
C9	C8	C11	O1	359.5	352.8
C9	C8	C11	C12	161.2	114.0
C9	C8	C11	HC11	260.1	231.5
C13	C9	C10	O4	359.6	359.4
C10	C9	C13	C8	180.5	180.7
C13	C9	C8	C7	180.3	180.9
C13	C9	C8	C11	0.6	1.4
C14	C13	C9	O6	163.8	116.3
C14	C13	C9	HC13	205.5	243.4
C9	C13	C14	O1	34.6	69.8
C9	C13	C14	C15	169.1	191.9
C9	C13	C14	HC14	286.5	308.9
O6	C13	C9	HC13	41.7	127.1
C9	C13	O6	C16	179.7	147.6
C4	C7	C8	O3	179.5	180.0
C7	C8	C9	C13	180.3	180.9
C9	C8	C7	C11	180.3	180.5
C7	C8	C11	O1	179.8	173.3
C7	C8	C11	C12	341.4	294.5
C7	C8	C11	HC11	80.4	52.0
C11	C8	C9	C13	0.6	1.4
C9	C8	C11	C7	179.7	179.5
C11	C8	C7	O3	0.1	358.9
C14	O1	C11	C8	18.3	44.8
O1	C11	C8	C12	198.4	238.8
O1	C11	C8	HC11	99.5	121.3
C12	C11	C8	HC11	261.1	242.5
C8	C11	C12	H121	54.7	297.6
C8	C11	C12	H122	180.0	57.6
C8	C11	C12	H123	305.3	177.6
C4	C7	O3	C8	180.5	180.0
O3	C7	C8	C11	0.1	358.9
C9	C13	C14	O6	189.6	232.9
C9	C13	C14	HC13	70.5	117.4
O6	C13	C14	HC13	240.9	244.5
C14	C13	O6	C16	14.7	29.4
O1	C14	C13	C15	225.4	237.9
O1	C14	C13	HC14	108.1	120.9
C13	C14	O1	C11	325.5	283.6
C15	C14	C13	HC14	242.6	243.0
C13	C14	C15	C16	19.2	37.1
C13	C14	C15	H151	253.9	155.2
C13	C14	C15	H152	144.5	279.1
C9	C13	O6	C14	165.0	118.2
C9	C13	O6	HC13	324.8	232.9
C14	C13	O6	HC13	159.8	114.7
O6	C13	C14	O1	204.9	196.9
O6	C13	C14	C15	339.5	319.0
O6	C13	C14	HC14	96.9	76.0
C15	C16	O6	C13	356.7	355.4
O5	C16	O6	C13	176.2	175.3
C9	C13	HC13	C14	277.7	244.3
C9	C13	HC13	O6	156.9	132.9
C14	C13	HC13	O6	239.2	248.7
HC13	C13	C14	O1	324.1	312.4
HC13	C13	C14	C15	98.6	74.5
HC13	C13	C14	HC14	216.0	191.5
HC13	C13	O6	C16	215.0	274.7
C8	C11	O1	C14	18.3	44.8
O1	C14	C13	O6	204.9	196.9
O1	C14	C13	HC13	324.1	312.4
C13	C14	O1	C15	130.5	109.0
C13	C14	O1	HC14	245.5	238.9
C15	C14	O1	HC14	115.0	129.9
O1	C14	C15	C16	154.0	150.0
O1	C14	C15	H151	28.7	268.1
O1	C14	C15	H152	279.3	32.0
C14	O1	C11	C12	214.7	283.6
C14	O1	C11	HC11	95.3	166.0
C15	C14	C13	O6	339.5	319.0
C15	C14	C13	HC13	98.6	74.5
C13	C14	C15	O1	225.2	247.1
C13	C14	C15	HC14	117.0	117.3
O1	C14	C15	HC14	251.8	230.2
C15	C14	O1	C11	194.9	174.5
C16	C15	C14	H151	125.3	241.9
C16	C15	C14	H152	234.7	118.1
C14	C15	C16	O5	170.6	157.8
C14	C15	C16	O6	350.1	337.7
H151	C15	C14	H152	109.4	236.1
HC14	C14	C13	O6	96.9	76.0
HC14	C14	C13	HC13	216.0	191.5
C13	C14	HC14	O1	121.7	117.6
C13	C14	HC14	C15	243.1	250.8
O1	C14	HC14	C15	121.4	133.2
HC14	C14	O1	C11	80.0	44.7
HC14	C14	C15	C16	262.2	279.9
HC14	C14	C15	H151	136.9	37.9
HC14	C14	C15	H152	27.5	161.8
C8	C11	O1	C12	163.6	121.2
C8	C11	O1	HC11	283.0	238.8
C11	O1	C14	C15	194.9	174.5
C11	O1	C14	HC14	80.0	44.7
C12	C11	O1	HC11	119.4	117.6
O1	C11	C12	H121	218.3	62.3
O1	C11	C12	H122	343.6	182.3
O1	C11	C12	H123	108.9	302.3
C8	C11	C12	O1	196.4	235.3
C8	C11	C12	HC11	76.7	117.6
O1	C11	C12	HC11	240.4	242.3
H121	C12	C11	H122	234.7	240.0
H121	C12	C11	H123	109.5	120.0
H122	C12	C11	H123	234.7	240.0
C8	C11	HC11	O1	119.4	124.8
C8	C11	HC11	C12	240.3	242.4
O1	C11	HC11	C12	120.9	117.7
HC11	C11	C12	H121	338.0	180.0
HC11	C11	C12	H122	103.2	300.0
HC11	C11	C12	H123	228.5	60.0
H121	C12	C11	HC11	338.0	180.0
C11	C12	H121	H122	134.5	120.0
C11	C12	H121	H123	247.3	240.0
H122	C12	H121	H123	112.8	120.0
H122	C12	C11	HC11	103.2	300.0
C11	C12	H122	H121	234.7	240.0
C11	C12	H122	H123	125.3	120.0
H121	C12	H122	H123	250.5	240.0
H123	C12	C11	HC11	228.5	60.0
C11	C12	H123	H121	112.7	120.0
C11	C12	H123	H122	225.5	240.0
H121	C12	H123	H122	112.8	120.0
C13	O6	C16	C15	356.7	355.4
C16	C15	C14	HC14	262.2	279.9
C14	C15	C16	H151	234.7	118.0
C14	C15	C16	H152	125.3	242.0
H151	C15	C16	H152	250.5	123.9
O5	C16	C15	O6	180.5	180.1
H151	C15	C14	HC14	136.9	37.9
C14	C15	H151	C16	118.4	248.0
C14	C15	H151	H152	239.2	124.0
C16	C15	H151	H152	120.8	235.9
H151	C15	C16	O5	295.9	39.7
H151	C15	C16	O6	115.4	219.7
H152	C15	C14	HC14	27.5	161.8
C14	C15	H152	C16	241.6	111.9
C14	C15	H152	H151	120.8	236.0
C16	C15	H152	H151	239.2	124.1
H152	C15	C16	O5	45.4	275.8
H152	C15	C16	O6	224.8	95.7
C13	O6	C16	O5	176.2	175.3
O5	C16	C15	H151	295.9	39.7
O5	C16	C15	H152	45.4	275.8
C15	C16	O5	O6	179.4	179.9
C16	O6	C13	HC13	215.0	274.7
O6	C16	C15	H151	115.4	219.7
O6	C16	C15	H152	224.8	95.7
C15	C16	O6	O5	180.6	180.1