PDB Chemical Component NMN

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NMN

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O3P	P	1.498	1.480
P	O1P	1.476	1.610
P	O2P	1.489	1.610
P	O5R	1.558	1.609
O1P	H1PO	0.950	0.968
O2P	H2PO	0.950	0.967
O5R	C5R	1.420	1.429
C5R	C4R	1.513	1.530
C5R	H5R1	1.115	1.089
C5R	H5R2	1.115	1.090
C4R	O4R	1.463	1.444
C4R	C3R	1.543	1.544
C4R	H4RC	1.116	1.091
O4R	C1R	1.402	1.444
C3R	O3R	1.441	1.429
C3R	C2R	1.517	1.548
C3R	H3RC	1.115	1.090
O3R	H3RO	0.949	0.967
C2R	O2R	1.436	1.429
C2R	C1R	1.499	1.545
C2R	H2RC	1.114	1.089
O2R	H2RO	0.950	0.967
C1R	N1	1.452	1.466
C1R	H1RC	1.115	1.090
N1	C2	1.393	1.316
N1	C6	1.426	1.319
C2	C3	1.475	1.395
C2	HC2	1.104	1.081
C3	C7	1.476	1.478
C3	C4	1.510	1.401
C7	O7	1.254	1.215
C7	N7	1.342	1.347
N7	HN71	1.020	0.970
N7	HN72	1.020	0.970
C4	C5	1.500	1.383
C4	HC4	1.103	1.080
C5	C6	1.322	1.382
C5	HC5	1.103	1.080
C6	HC6	1.103	1.080

Bond Angles for NMN

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O3P	P	O1P	105.9	109.5
O3P	P	O2P	108.9	109.5
O3P	P	O5R	96.1	109.5
O1P	P	O2P	115.8	109.5
O1P	P	O5R	110.2	109.5
P	O1P	H1PO	105.9	106.8
O2P	P	O5R	117.5	109.5
P	O2P	H2PO	108.9	106.8
P	O5R	C5R	121.8	106.8
O5R	C5R	C4R	103.5	109.5
O5R	C5R	H5R1	114.5	109.5
O5R	C5R	H5R2	114.5	109.4
C4R	C5R	H5R1	114.4	109.5
C4R	C5R	H5R2	114.5	109.4
C5R	C4R	O4R	106.7	110.4
C5R	C4R	C3R	115.7	110.5
C5R	C4R	H4RC	105.9	110.3
H5R1	C5R	H5R2	96.0	109.5
O4R	C4R	C3R	105.0	104.8
O4R	C4R	H4RC	116.4	110.4
C4R	O4R	C1R	107.7	105.3
C3R	C4R	H4RC	107.5	110.3
C4R	C3R	O3R	110.8	110.6
C4R	C3R	C2R	102.2	104.1
C4R	C3R	H3RC	114.0	110.5
O4R	C1R	C2R	103.4	104.9
O4R	C1R	N1	111.9	110.4
O4R	C1R	H1RC	112.5	110.4
O3R	C3R	C2R	111.5	110.6
O3R	C3R	H3RC	105.1	110.5
C3R	O3R	H3RO	110.8	106.8
C2R	C3R	H3RC	113.4	110.5
C3R	C2R	O2R	110.5	110.5
C3R	C2R	C1R	100.5	104.0
C3R	C2R	H2RC	115.8	110.5
O2R	C2R	C1R	113.0	110.8
O2R	C2R	H2RC	104.0	110.4
C2R	O2R	H2RO	110.5	106.8
C1R	C2R	H2RC	113.4	110.5
C2R	C1R	N1	111.5	110.3
C2R	C1R	H1RC	113.0	110.4
N1	C1R	H1RC	104.8	110.4
C1R	N1	C2	119.3	119.0
C1R	N1	C6	121.5	119.1
C2	N1	C6	119.2	121.9
N1	C2	C3	121.5	120.6
N1	C2	HC2	116.3	119.8
N1	C6	C5	121.5	121.1
N1	C6	HC6	123.1	119.4
C3	C2	HC2	122.2	119.6
C2	C3	C7	116.2	120.6
C2	C3	C4	118.6	118.8
C7	C3	C4	124.9	120.6
C3	C7	O7	117.2	120.0
C3	C7	N7	122.6	120.0
C3	C4	C5	112.5	118.3
C3	C4	HC4	124.0	120.8
O7	C7	N7	120.3	120.0
C7	N7	HN71	120.3	120.0
C7	N7	HN72	122.6	120.0
HN71	N7	HN72	117.2	120.0
C5	C4	HC4	123.5	120.9
C4	C5	C6	125.7	119.3
C4	C5	HC5	124.2	120.3
C6	C5	HC5	110.1	120.4
C5	C6	HC6	115.4	119.5

Torsion Angles for NMN

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O1P	P	O3P	O2P	234.8	120.0
O1P	P	O3P	O5R	113.0	240.0
O3P	P	O1P	H1PO	180.0	300.0
O2P	P	O3P	O5R	238.2	120.0
O3P	P	O2P	H2PO	180.0	180.0
O3P	P	O5R	C5R	245.5	55.0
O3P	P	O1P	O2P	120.8	240.0
O3P	P	O1P	O5R	257.1	120.0
O2P	P	O1P	O5R	136.3	240.0
O1P	P	O2P	H2PO	299.1	60.0
O1P	P	O5R	C5R	136.1	175.0
O3P	P	O2P	O1P	240.9	120.0
O3P	P	O2P	O5R	107.8	240.0
O1P	P	O2P	O5R	226.9	120.0
O2P	P	O1P	H1PO	59.2	60.0
O2P	P	O5R	C5R	0.6	295.0
O3P	P	O5R	O1P	109.4	240.0
O3P	P	O5R	O2P	244.9	120.0
O1P	P	O5R	O2P	135.5	240.0
O5R	P	O1P	H1PO	282.9	180.0
O5R	P	O2P	H2PO	72.2	300.0
P	O5R	C5R	C4R	179.1	180.0
P	O5R	C5R	H5R1	304.3	60.0
P	O5R	C5R	H5R2	53.8	300.0
H1PO	O1P	P	O2P	59.2	60.0
H1PO	O1P	P	O5R	282.9	180.0
H2PO	O2P	P	O5R	72.2	300.0
C4R	C5R	O5R	H5R1	234.8	120.1
C4R	C5R	O5R	H5R2	125.3	240.1
O5R	C5R	C4R	O4R	197.0	66.4
O5R	C5R	C4R	C3R	313.4	181.9
O5R	C5R	C4R	H4RC	72.4	304.1
H5R1	C5R	O5R	H5R2	250.5	120.0
O5R	C5R	C4R	H5R1	125.3	239.9
O5R	C5R	C4R	H5R2	234.7	119.9
H5R1	C5R	C4R	H5R2	109.4	240.0
O4R	C4R	C5R	C3R	243.6	244.5
O4R	C4R	C5R	H4RC	124.6	122.3
C5R	C4R	O4R	C1R	136.8	159.5
C3R	C4R	C5R	H4RC	241.0	237.8
C5R	C4R	C3R	O3R	139.2	98.3
C5R	C4R	C3R	C2R	258.2	217.0
C5R	C4R	C3R	H3RC	20.9	335.7
O5R	C5R	H5R1	C4R	240.7	120.1
O5R	C5R	H5R1	H5R2	120.4	240.0
C4R	C5R	H5R1	H5R2	239.7	120.0
H5R1	C5R	C4R	O4R	71.7	186.5
H5R1	C5R	C4R	C3R	188.1	302.0
H5R1	C5R	C4R	H4RC	307.1	64.2
O5R	C5R	H5R2	C4R	119.3	240.0
O5R	C5R	H5R2	H5R1	239.6	120.0
C4R	C5R	H5R2	H5R1	120.3	240.0
H5R2	C5R	C4R	O4R	322.3	306.5
H5R2	C5R	C4R	C3R	78.7	62.0
H5R2	C5R	C4R	H4RC	197.7	184.2
O4R	C4R	C5R	H5R1	71.7	186.5
O4R	C4R	C5R	H5R2	322.3	306.5
C5R	C4R	O4R	C3R	123.3	119.0
C5R	C4R	O4R	H4RC	242.1	237.8
C3R	C4R	O4R	H4RC	118.8	118.8
O4R	C4R	C3R	O3R	256.5	217.3
O4R	C4R	C3R	C2R	15.5	336.0
O4R	C4R	C3R	H3RC	138.2	94.6
C4R	O4R	C1R	C2R	322.3	319.5
C4R	O4R	C1R	N1	202.2	200.7
C4R	O4R	C1R	H1RC	84.6	78.4
C3R	C4R	C5R	H5R1	188.1	302.0
C3R	C4R	C5R	H5R2	78.7	62.0
C5R	C4R	C3R	O4R	242.7	241.0
C5R	C4R	C3R	H4RC	118.1	122.2
O4R	C4R	C3R	H4RC	235.4	241.2
C3R	C4R	O4R	C1R	13.5	40.5
O3R	C3R	C4R	C2R	241.1	241.3
O3R	C3R	C4R	H3RC	118.3	122.6
C4R	C3R	O3R	H3RO	180.0	180.0
C2R	C3R	C4R	H3RC	237.2	241.4
C4R	C3R	C2R	O2R	203.9	241.2
C4R	C3R	C2R	C1R	323.5	0.1
C4R	C3R	C2R	H2RC	86.1	118.6
H4RC	C4R	C5R	H5R1	307.1	64.2
H4RC	C4R	C5R	H5R2	197.7	184.2
C5R	C4R	H4RC	O4R	118.3	122.3
C5R	C4R	H4RC	C3R	235.8	237.7
O4R	C4R	H4RC	C3R	117.4	115.4
H4RC	C4R	O4R	C1R	254.7	281.8
H4RC	C4R	C3R	O3R	21.1	336.1
H4RC	C4R	C3R	C2R	140.0	94.8
H4RC	C4R	C3R	H3RC	262.8	213.4
C1R	O4R	C4R	C3R	13.5	40.5
C1R	O4R	C4R	H4RC	254.7	281.8
C3R	C2R	C1R	O4R	46.3	23.9
O2R	C2R	C1R	O4R	164.1	142.6
O4R	C1R	C2R	H2RC	282.1	265.3
C2R	C1R	O4R	N1	120.1	118.8
C2R	C1R	O4R	H1RC	237.7	241.1
N1	C1R	O4R	H1RC	117.6	122.3
O4R	C1R	N1	C2	208.0	217.3
O4R	C1R	N1	C6	28.0	37.0
O3R	C3R	C4R	H4RC	21.1	336.1
C4R	C3R	O3R	C2R	113.1	114.7
C4R	C3R	O3R	H3RC	236.4	237.3
C2R	C3R	O3R	H3RC	123.3	122.6
O3R	C3R	C2R	O2R	322.3	359.9
O3R	C3R	C2R	C1R	81.9	118.8
O3R	C3R	C2R	H2RC	204.5	237.4
C2R	C3R	C4R	H4RC	140.0	94.8
C4R	C3R	C2R	O3R	241.6	241.3
C4R	C3R	C2R	H3RC	123.2	118.6
O4R	C1R	C2R	C3R	46.3	23.9
O3R	C3R	C2R	H3RC	241.6	237.4
C2R	C3R	O3R	H3RO	66.9	65.3
O2R	C2R	C3R	C1R	240.4	241.1
O2R	C2R	C3R	H2RC	117.8	122.5
C3R	C2R	O2R	H2RO	180.0	298.5
C1R	C2R	C3R	H2RC	237.4	241.4
C3R	C2R	C1R	N1	166.7	142.8
C3R	C2R	C1R	H1RC	284.4	265.0
H3RC	C3R	C4R	H4RC	262.8	213.4
C4R	C3R	H3RC	O3R	121.5	122.7
C4R	C3R	H3RC	C2R	243.6	245.4
O3R	C3R	H3RC	C2R	122.1	122.7
H3RC	C3R	O3R	H3RO	303.6	302.7
H3RC	C3R	C2R	O2R	80.7	122.5
H3RC	C3R	C2R	C1R	200.3	241.4
H3RC	C3R	C2R	H2RC	322.9	360.0
H3RO	O3R	C3R	C2R	66.9	65.3
H3RO	O3R	C3R	H3RC	303.6	302.7
O4R	C1R	C2R	O2R	164.1	142.6
O2R	C2R	C3R	H3RC	80.7	122.5
C3R	C2R	O2R	C1R	111.7	114.7
C3R	C2R	O2R	H2RC	235.2	237.4
C1R	C2R	O2R	H2RC	123.4	122.8
O2R	C2R	C1R	N1	284.4	261.4
O2R	C2R	C1R	H1RC	42.1	23.7
O4R	C1R	C2R	N1	239.6	241.2
O4R	C1R	C2R	H1RC	122.0	118.9
C1R	C2R	C3R	H3RC	200.3	241.4
C3R	C2R	C1R	O2R	242.3	241.3
C3R	C2R	C1R	H2RC	124.2	118.6
O2R	C2R	C1R	H2RC	242.0	237.3
C1R	C2R	O2R	H2RO	68.3	183.9
N1	C1R	C2R	H1RC	242.3	237.8
C2R	C1R	N1	C2	92.7	101.8
C2R	C1R	N1	C6	272.7	281.5
H2RC	C2R	C3R	H3RC	322.9	360.0
C3R	C2R	H2RC	O2R	121.4	122.6
C3R	C2R	H2RC	C1R	244.5	245.5
O2R	C2R	H2RC	C1R	123.2	122.9
H2RC	C2R	O2R	H2RO	304.8	61.1
H2RC	C2R	C1R	N1	42.5	24.2
H2RC	C2R	C1R	H1RC	160.1	146.4
H2RO	O2R	C2R	C1R	68.3	183.9
H2RO	O2R	C2R	H2RC	304.8	61.1
O4R	C1R	N1	C2R	115.3	115.5
O4R	C1R	N1	H1RC	237.8	237.7
N1	C1R	C2R	H2RC	42.5	24.2
C2R	C1R	N1	H1RC	122.5	122.2
C2	N1	C1R	C6	179.9	180.3
C1R	N1	C2	C3	189.4	180.3
C1R	N1	C2	HC2	9.5	359.7
C1R	N1	C6	C5	178.2	180.0
C1R	N1	C6	HC6	358.2	360.0
O4R	C1R	H1RC	C2R	243.3	244.5
O4R	C1R	H1RC	N1	121.8	122.3
H1RC	C1R	C2R	H2RC	160.1	146.4
C2R	C1R	H1RC	N1	238.5	237.8
H1RC	C1R	N1	C2	330.1	339.6
H1RC	C1R	N1	C6	150.2	159.3
C2	N1	C1R	H1RC	330.1	339.6
C1R	N1	C2	C6	180.1	179.7
C2	N1	C6	C5	358.3	359.7
C2	N1	C6	HC6	178.3	179.7
C3	C2	N1	HC2	180.0	180.6
N1	C2	C3	C7	173.6	179.7
N1	C2	C3	C4	347.4	359.4
C6	N1	C1R	H1RC	150.2	159.3
C1R	N1	C6	C2	179.9	180.3
C6	N1	C2	C3	9.4	0.6
C6	N1	C2	HC2	189.4	180.0
C4	C5	C6	N1	357.4	0.0
N1	C6	C5	HC5	177.4	180.0
C5	C6	N1	HC6	180.0	180.0
C3	C2	N1	C6	9.4	0.6
N1	C2	C3	HC2	180.0	179.4
C7	C3	C2	C4	186.2	180.3
C2	C3	C7	O7	181.9	359.7
C2	C3	C7	N7	2.2	179.7
C2	C3	C4	C5	7.9	0.3
C2	C3	C4	HC4	187.9	180.3
HC2	C2	N1	C6	189.4	180.0
N1	C2	HC2	C3	180.0	180.6
HC2	C2	C3	C7	353.6	0.3
HC2	C2	C3	C4	167.3	180.0
C7	C3	C2	HC2	353.6	0.3
C2	C3	C7	C4	173.3	179.7
C7	C3	C4	C5	181.1	180.0
C7	C3	C4	HC4	1.1	360.0
O7	C7	C3	N7	179.7	180.0
C3	C7	N7	HN71	359.7	180.0
C3	C7	N7	HN72	179.9	359.7
C4	C3	C2	HC2	167.3	180.0
C2	C3	C4	C7	186.8	180.3
C4	C3	C7	O7	8.5	180.0
C4	C3	C7	N7	188.9	0.0
C5	C4	C3	HC4	180.0	180.0
C3	C4	C5	C6	359.3	360.0
C3	C4	C5	HC5	179.3	180.0
O7	C7	C3	C4	8.5	180.0
C3	C7	O7	N7	180.3	180.0
O7	C7	N7	HN71	180.1	360.0
O7	C7	N7	HN72	0.3	179.7
N7	C7	C3	C4	188.9	0.0
C3	C7	N7	O7	179.6	180.0
HN71	N7	C7	HN72	179.8	180.3
C7	N7	HN71	HN72	180.2	179.7
C7	N7	HN72	HN71	179.8	180.3
N1	C6	C5	C4	357.4	0.0
C3	C4	C5	HC4	180.0	180.0
C6	C5	C4	HC5	180.0	180.0
C4	C5	C6	HC6	177.4	180.0
C3	C4	HC4	C5	180.0	180.0
HC4	C4	C5	C6	179.3	180.0
HC4	C4	C5	HC5	359.3	360.0
N1	C6	C5	HC6	180.0	180.0
C6	C5	C4	HC4	179.3	180.0
C4	C5	C6	HC5	180.0	180.0
HC5	C5	C4	HC4	359.3	360.0
C4	C5	HC5	C6	180.0	180.0
HC5	C5	C6	HC6	357.4	0.0
N1	C6	HC6	C5	180.0	180.0
HC6	C6	C5	HC5	357.4	0.0