PDB Chemical Component NMG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for NMG
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CG |
CD |
1.555 |
1.507 |
| CG |
O1 |
1.215 |
1.341 |
| CG |
O2 |
1.366 |
1.208 |
| CD |
NE |
1.433 |
1.463 |
| CD |
HD1 |
1.115 |
1.090 |
| CD |
HD2 |
1.116 |
1.089 |
| NE |
CZ |
1.329 |
1.374 |
| NE |
HNE |
1.020 |
0.971 |
| CZ |
NH1 |
1.311 |
1.374 |
| CZ |
NH2 |
1.345 |
1.304 |
| NH1 |
HH11 |
1.021 |
0.970 |
| NH1 |
HH12 |
1.019 |
0.969 |
| NH2 |
HH2 |
1.019 |
0.970 |
| O1 |
HO1 |
0.950 |
0.967 |
Bond Angles for NMG
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CD |
CG |
O1 |
117.1 |
120.1 |
| CD |
CG |
O2 |
111.7 |
119.9 |
| CG |
CD |
NE |
111.9 |
109.5 |
| CG |
CD |
HD1 |
111.3 |
109.4 |
| CG |
CD |
HD2 |
111.3 |
109.4 |
| O1 |
CG |
O2 |
131.3 |
120.0 |
| CG |
O1 |
HO1 |
117.0 |
120.0 |
| NE |
CD |
HD1 |
111.3 |
109.5 |
| NE |
CD |
HD2 |
111.3 |
109.5 |
| CD |
NE |
CZ |
125.0 |
120.1 |
| CD |
NE |
HNE |
106.7 |
120.0 |
| HD1 |
CD |
HD2 |
99.0 |
109.4 |
| CZ |
NE |
HNE |
106.7 |
120.0 |
| NE |
CZ |
NH1 |
119.0 |
120.1 |
| NE |
CZ |
NH2 |
120.2 |
119.9 |
| NH1 |
CZ |
NH2 |
120.8 |
120.0 |
| CZ |
NH1 |
HH11 |
108.8 |
120.0 |
| CZ |
NH1 |
HH12 |
119.0 |
120.0 |
| CZ |
NH2 |
HH2 |
118.7 |
120.0 |
| HH11 |
NH1 |
HH12 |
108.8 |
120.0 |
Torsion Angles for NMG
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O1 |
CG |
CD |
O2 |
179.5 |
180.0 |
| CD |
CG |
O1 |
HO1 |
180.0 |
180.0 |
| NE |
CD |
CG |
HD1 |
125.3 |
120.0 |
| NE |
CD |
CG |
HD2 |
234.7 |
239.9 |
| CG |
CD |
NE |
CZ |
294.4 |
180.0 |
| CG |
CD |
NE |
HNE |
169.1 |
-0.0 |
| HD1 |
CD |
CG |
HD2 |
109.5 |
119.9 |
| CD |
CG |
O1 |
O2 |
180.6 |
180.0 |
| O1 |
CG |
CD |
NE |
155.8 |
180.0 |
| O1 |
CG |
CD |
HD1 |
30.5 |
60.0 |
| O1 |
CG |
CD |
HD2 |
281.1 |
300.1 |
| CD |
CG |
O2 |
O1 |
179.4 |
180.0 |
| O2 |
CG |
CD |
NE |
336.3 |
-0.0 |
| O2 |
CG |
CD |
HD1 |
211.0 |
240.0 |
| O2 |
CG |
CD |
HD2 |
101.6 |
120.1 |
| O2 |
CG |
O1 |
HO1 |
359.4 |
360.0 |
| NE |
CD |
CG |
O1 |
155.8 |
180.0 |
| NE |
CD |
CG |
O2 |
336.3 |
-0.0 |
| CG |
CD |
NE |
HD1 |
234.7 |
240.0 |
| CG |
CD |
NE |
HD2 |
125.3 |
120.0 |
| HD1 |
CD |
NE |
HD2 |
250.5 |
240.0 |
| CZ |
NE |
CD |
HNE |
125.3 |
180.0 |
| CD |
NE |
CZ |
NH1 |
178.5 |
180.0 |
| CD |
NE |
CZ |
NH2 |
359.4 |
-0.0 |
| HD1 |
CD |
CG |
O1 |
30.5 |
60.0 |
| HD1 |
CD |
CG |
O2 |
211.0 |
240.0 |
| CG |
CD |
HD1 |
NE |
125.6 |
120.0 |
| CG |
CD |
HD1 |
HD2 |
242.8 |
240.1 |
| NE |
CD |
HD1 |
HD2 |
117.2 |
120.0 |
| HD1 |
CD |
NE |
CZ |
59.6 |
300.0 |
| HD1 |
CD |
NE |
HNE |
294.4 |
120.0 |
| HD2 |
CD |
CG |
O1 |
281.1 |
300.1 |
| HD2 |
CD |
CG |
O2 |
101.6 |
120.1 |
| CG |
CD |
HD2 |
NE |
234.4 |
239.9 |
| CG |
CD |
HD2 |
HD1 |
117.2 |
119.9 |
| NE |
CD |
HD2 |
HD1 |
242.8 |
240.0 |
| HD2 |
CD |
NE |
CZ |
169.1 |
60.0 |
| HD2 |
CD |
NE |
HNE |
43.9 |
240.0 |
| CZ |
NE |
CD |
HD1 |
59.6 |
300.0 |
| CZ |
NE |
CD |
HD2 |
169.1 |
60.0 |
| CD |
NE |
CZ |
HNE |
234.8 |
180.0 |
| NH1 |
CZ |
NE |
NH2 |
179.1 |
180.0 |
| NE |
CZ |
NH1 |
HH11 |
54.7 |
180.0 |
| NE |
CZ |
NH1 |
HH12 |
180.0 |
359.8 |
| NE |
CZ |
NH2 |
HH2 |
10.2 |
-0.0 |
| HNE |
NE |
CD |
HD1 |
294.4 |
120.0 |
| HNE |
NE |
CD |
HD2 |
43.9 |
240.0 |
| CD |
NE |
HNE |
CZ |
135.7 |
180.0 |
| HNE |
NE |
CZ |
NH1 |
303.8 |
-0.0 |
| HNE |
NE |
CZ |
NH2 |
124.6 |
180.0 |
| NH1 |
CZ |
NE |
HNE |
303.8 |
-0.0 |
| NE |
CZ |
NH1 |
NH2 |
180.9 |
180.0 |
| NH1 |
CZ |
NH2 |
HH2 |
191.1 |
180.0 |
| HH11 |
NH1 |
CZ |
HH12 |
234.8 |
180.2 |
| NH2 |
CZ |
NE |
HNE |
124.6 |
180.0 |
| NE |
CZ |
NH2 |
NH1 |
179.1 |
180.0 |
| NH2 |
CZ |
NH1 |
HH11 |
233.9 |
-0.0 |
| NH2 |
CZ |
NH1 |
HH12 |
359.1 |
179.8 |
| HH11 |
NH1 |
CZ |
NH2 |
233.9 |
-0.0 |
| CZ |
NH1 |
HH11 |
HH12 |
131.0 |
179.8 |
| HH12 |
NH1 |
CZ |
NH2 |
359.1 |
179.8 |
| CZ |
NH1 |
HH12 |
HH11 |
234.7 |
180.2 |
| HO1 |
O1 |
CG |
O2 |
359.4 |
360.0 |