PDB Chemical Component NLG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for NLG
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CA |
C |
1.341 |
1.507 |
| CA |
CB |
1.509 |
1.529 |
| CA |
N2 |
1.534 |
1.463 |
| CA |
HA |
1.115 |
1.090 |
| C |
OXT |
1.396 |
1.341 |
| C |
O |
1.285 |
1.209 |
| OXT |
HXT |
0.951 |
0.967 |
| CB |
CG |
1.590 |
1.529 |
| CB |
HBC1 |
1.115 |
1.089 |
| CB |
HBC2 |
1.115 |
1.090 |
| CG |
CD |
1.523 |
1.507 |
| CG |
HGC1 |
1.115 |
1.090 |
| CG |
HGC2 |
1.115 |
1.090 |
| CD |
OE1 |
1.243 |
1.208 |
| CD |
OE2 |
1.265 |
1.342 |
| OE2 |
HE2 |
0.950 |
0.967 |
| C7 |
C8 |
1.315 |
1.506 |
| C7 |
O7 |
1.262 |
1.213 |
| C7 |
N2 |
1.116 |
1.348 |
| C8 |
H8C1 |
1.103 |
1.089 |
| C8 |
H8C2 |
1.103 |
1.090 |
| C8 |
H8C3 |
1.114 |
1.090 |
| N2 |
H2 |
1.020 |
0.970 |
Bond Angles for NLG
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C |
CA |
CB |
108.4 |
109.5 |
| C |
CA |
N2 |
107.9 |
109.4 |
| C |
CA |
HA |
108.2 |
109.5 |
| CA |
C |
OXT |
129.9 |
120.0 |
| CA |
C |
O |
127.0 |
120.0 |
| CB |
CA |
N2 |
115.7 |
109.5 |
| CB |
CA |
HA |
108.2 |
109.5 |
| CA |
CB |
CG |
112.1 |
109.5 |
| CA |
CB |
HBC1 |
111.3 |
109.5 |
| CA |
CB |
HBC2 |
111.2 |
109.5 |
| N2 |
CA |
HA |
108.2 |
109.4 |
| CA |
N2 |
C7 |
139.5 |
120.1 |
| CA |
N2 |
H2 |
110.3 |
120.0 |
| OXT |
C |
O |
102.5 |
120.0 |
| C |
OXT |
HXT |
129.9 |
120.0 |
| CG |
CB |
HBC1 |
111.2 |
109.5 |
| CG |
CB |
HBC2 |
111.2 |
109.5 |
| CB |
CG |
CD |
108.9 |
109.5 |
| CB |
CG |
HGC1 |
112.5 |
109.5 |
| CB |
CG |
HGC2 |
112.4 |
109.5 |
| HBC1 |
CB |
HBC2 |
99.1 |
109.4 |
| CD |
CG |
HGC1 |
112.4 |
109.4 |
| CD |
CG |
HGC2 |
112.4 |
109.5 |
| CG |
CD |
OE1 |
131.7 |
120.0 |
| CG |
CD |
OE2 |
105.4 |
120.0 |
| HGC1 |
CG |
HGC2 |
98.0 |
109.4 |
| OE1 |
CD |
OE2 |
122.7 |
119.9 |
| CD |
OE2 |
HE2 |
105.4 |
120.1 |
| C8 |
C7 |
O7 |
119.9 |
120.0 |
| C8 |
C7 |
N2 |
126.8 |
120.1 |
| C7 |
C8 |
H8C1 |
126.8 |
109.5 |
| C7 |
C8 |
H8C2 |
119.9 |
109.4 |
| C7 |
C8 |
H8C3 |
106.1 |
109.5 |
| O7 |
C7 |
N2 |
111.8 |
119.9 |
| C7 |
N2 |
H2 |
110.2 |
119.9 |
| H8C1 |
C8 |
H8C2 |
111.7 |
109.5 |
| H8C1 |
C8 |
H8C3 |
106.1 |
109.5 |
| H8C2 |
C8 |
H8C3 |
38.4 |
109.5 |
Torsion Angles for NLG
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CB |
CA |
C |
N2 |
126.0 |
120.0 |
| CB |
CA |
C |
HA |
242.9 |
240.0 |
| C |
CA |
CB |
CG |
61.3 |
180.0 |
| C |
CA |
CB |
HBC1 |
296.1 |
300.0 |
| C |
CA |
CB |
HBC2 |
186.6 |
60.0 |
| N2 |
CA |
C |
HA |
116.8 |
119.9 |
| C |
CA |
N2 |
C7 |
280.7 |
270.0 |
| C |
CA |
N2 |
H2 |
100.7 |
90.0 |
| OXT |
C |
CA |
O |
189.9 |
180.1 |
| CA |
C |
OXT |
HXT |
180.0 |
180.0 |
| C |
CA |
CB |
N2 |
238.6 |
240.0 |
| C |
CA |
CB |
HA |
117.1 |
120.0 |
| CB |
CA |
C |
OXT |
94.1 |
90.0 |
| CB |
CA |
C |
O |
264.2 |
270.0 |
| N2 |
CA |
CB |
HA |
238.5 |
240.0 |
| CB |
CA |
N2 |
C7 |
159.0 |
150.0 |
| CB |
CA |
N2 |
H2 |
339.0 |
330.0 |
| CG |
CB |
CA |
HBC1 |
125.2 |
240.0 |
| CG |
CB |
CA |
HBC2 |
234.8 |
120.1 |
| CA |
CB |
CG |
CD |
70.5 |
180.0 |
| CA |
CB |
CG |
HGC1 |
305.2 |
300.0 |
| CA |
CB |
CG |
HGC2 |
195.8 |
59.9 |
| HBC1 |
CB |
CA |
HBC2 |
109.5 |
240.1 |
| C |
CA |
N2 |
CB |
121.7 |
120.0 |
| C |
CA |
N2 |
HA |
243.1 |
240.1 |
| N2 |
CA |
C |
OXT |
328.0 |
330.0 |
| N2 |
CA |
C |
O |
138.1 |
149.9 |
| CB |
CA |
N2 |
HA |
121.5 |
120.0 |
| N2 |
CA |
CB |
CG |
182.7 |
300.0 |
| N2 |
CA |
CB |
HBC1 |
57.5 |
60.0 |
| N2 |
CA |
CB |
HBC2 |
308.0 |
180.0 |
| C8 |
C7 |
N2 |
CA |
171.3 |
180.0 |
| O7 |
C7 |
N2 |
CA |
5.7 |
0.0 |
| C7 |
N2 |
CA |
H2 |
180.0 |
180.0 |
| C |
CA |
HA |
CB |
242.7 |
240.0 |
| C |
CA |
HA |
N2 |
116.7 |
119.9 |
| HA |
CA |
C |
OXT |
211.2 |
210.1 |
| HA |
CA |
C |
O |
21.3 |
30.0 |
| CB |
CA |
HA |
N2 |
234.0 |
240.0 |
| HA |
CA |
CB |
CG |
304.2 |
60.0 |
| HA |
CA |
CB |
HBC1 |
179.0 |
180.0 |
| HA |
CA |
CB |
HBC2 |
69.4 |
300.0 |
| HA |
CA |
N2 |
C7 |
37.5 |
29.9 |
| HA |
CA |
N2 |
H2 |
217.5 |
210.0 |
| OXT |
C |
CA |
CB |
94.1 |
90.0 |
| OXT |
C |
CA |
N2 |
328.0 |
330.0 |
| OXT |
C |
CA |
HA |
211.2 |
210.1 |
| CA |
C |
OXT |
O |
171.9 |
179.9 |
| O |
C |
CA |
CB |
264.2 |
270.0 |
| O |
C |
CA |
N2 |
138.1 |
149.9 |
| O |
C |
CA |
HA |
21.3 |
30.0 |
| CA |
C |
O |
OXT |
187.8 |
180.1 |
| O |
C |
OXT |
HXT |
8.1 |
0.1 |
| HXT |
OXT |
C |
O |
8.1 |
0.1 |
| CG |
CB |
CA |
N2 |
182.7 |
300.0 |
| CG |
CB |
CA |
HA |
304.2 |
60.0 |
| CA |
CB |
CG |
HBC1 |
234.7 |
120.0 |
| CA |
CB |
CG |
HBC2 |
125.2 |
239.9 |
| HBC1 |
CB |
CG |
HBC2 |
250.5 |
120.0 |
| CD |
CG |
CB |
HGC1 |
125.3 |
240.1 |
| CD |
CG |
CB |
HGC2 |
234.7 |
120.1 |
| CB |
CG |
CD |
OE1 |
17.1 |
359.9 |
| CB |
CG |
CD |
OE2 |
202.0 |
180.0 |
| HGC1 |
CG |
CB |
HGC2 |
109.5 |
240.0 |
| HBC1 |
CB |
CA |
N2 |
57.5 |
60.0 |
| HBC1 |
CB |
CA |
HA |
179.0 |
180.0 |
| CA |
CB |
HBC1 |
CG |
125.7 |
240.0 |
| CA |
CB |
HBC1 |
HBC2 |
242.8 |
120.0 |
| CG |
CB |
HBC1 |
HBC2 |
117.1 |
240.0 |
| HBC1 |
CB |
CG |
CD |
195.8 |
60.1 |
| HBC1 |
CB |
CG |
HGC1 |
70.5 |
180.0 |
| HBC1 |
CB |
CG |
HGC2 |
321.0 |
300.0 |
| HBC2 |
CB |
CA |
N2 |
308.0 |
180.0 |
| HBC2 |
CB |
CA |
HA |
69.4 |
300.0 |
| CA |
CB |
HBC2 |
CG |
234.3 |
120.0 |
| CA |
CB |
HBC2 |
HBC1 |
117.2 |
240.0 |
| CG |
CB |
HBC2 |
HBC1 |
242.9 |
120.0 |
| HBC2 |
CB |
CG |
CD |
305.3 |
300.1 |
| HBC2 |
CB |
CG |
HGC1 |
180.0 |
60.0 |
| HBC2 |
CB |
CG |
HGC2 |
70.5 |
180.0 |
| CD |
CG |
CB |
HBC1 |
195.8 |
60.1 |
| CD |
CG |
CB |
HBC2 |
305.3 |
300.1 |
| CB |
CG |
CD |
HGC1 |
234.7 |
120.0 |
| CB |
CG |
CD |
HGC2 |
125.3 |
239.9 |
| HGC1 |
CG |
CD |
HGC2 |
250.5 |
119.9 |
| OE1 |
CD |
CG |
OE2 |
175.1 |
179.9 |
| CG |
CD |
OE2 |
HE2 |
180.0 |
180.0 |
| HGC1 |
CG |
CB |
HBC1 |
70.5 |
180.0 |
| HGC1 |
CG |
CB |
HBC2 |
180.0 |
60.0 |
| CB |
CG |
HGC1 |
CD |
123.3 |
240.0 |
| CB |
CG |
HGC1 |
HGC2 |
241.6 |
120.0 |
| CD |
CG |
HGC1 |
HGC2 |
118.3 |
240.0 |
| HGC1 |
CG |
CD |
OE1 |
142.4 |
240.0 |
| HGC1 |
CG |
CD |
OE2 |
327.3 |
60.1 |
| HGC2 |
CG |
CB |
HBC1 |
321.0 |
300.0 |
| HGC2 |
CG |
CB |
HBC2 |
70.5 |
180.0 |
| CB |
CG |
HGC2 |
CD |
236.7 |
120.1 |
| CB |
CG |
HGC2 |
HGC1 |
118.4 |
240.0 |
| CD |
CG |
HGC2 |
HGC1 |
241.7 |
119.9 |
| HGC2 |
CG |
CD |
OE1 |
251.9 |
120.0 |
| HGC2 |
CG |
CD |
OE2 |
76.7 |
300.1 |
| OE1 |
CD |
CG |
HGC1 |
142.4 |
240.0 |
| OE1 |
CD |
CG |
HGC2 |
251.9 |
120.0 |
| CG |
CD |
OE1 |
OE2 |
185.6 |
180.1 |
| OE1 |
CD |
OE2 |
HE2 |
4.3 |
0.1 |
| OE2 |
CD |
CG |
HGC1 |
327.3 |
60.1 |
| OE2 |
CD |
CG |
HGC2 |
76.7 |
300.1 |
| CG |
CD |
OE2 |
OE1 |
175.7 |
179.9 |
| CA |
N2 |
C7 |
C8 |
171.3 |
180.0 |
| O7 |
C7 |
C8 |
N2 |
164.5 |
180.0 |
| C8 |
C7 |
N2 |
H2 |
351.3 |
0.0 |
| H8C1 |
C8 |
C7 |
H8C2 |
164.5 |
240.0 |
| H8C1 |
C8 |
C7 |
H8C3 |
125.3 |
120.0 |
| H8C2 |
C8 |
C7 |
H8C3 |
320.8 |
240.0 |
| CA |
N2 |
C7 |
O7 |
5.7 |
0.0 |
| C8 |
C7 |
O7 |
N2 |
193.3 |
180.0 |
| O7 |
C7 |
C8 |
H8C1 |
344.5 |
360.0 |
| O7 |
C7 |
C8 |
H8C2 |
180.0 |
120.0 |
| O7 |
C7 |
C8 |
H8C3 |
219.2 |
240.0 |
| O7 |
C7 |
N2 |
H2 |
185.8 |
180.0 |
| C7 |
N2 |
CA |
HA |
37.5 |
29.9 |
| CA |
N2 |
C7 |
H2 |
180.0 |
180.0 |
| C8 |
C7 |
N2 |
O7 |
165.6 |
180.0 |
| N2 |
C7 |
C8 |
H8C1 |
180.0 |
180.0 |
| N2 |
C7 |
C8 |
H8C2 |
15.5 |
300.0 |
| N2 |
C7 |
C8 |
H8C3 |
54.7 |
60.0 |
| H8C1 |
C8 |
C7 |
O7 |
344.5 |
360.0 |
| H8C1 |
C8 |
C7 |
N2 |
180.0 |
180.0 |
| C7 |
C8 |
H8C1 |
H8C2 |
194.4 |
120.0 |
| C7 |
C8 |
H8C1 |
H8C3 |
234.7 |
240.0 |
| H8C2 |
C8 |
H8C1 |
H8C3 |
40.3 |
120.0 |
| H8C2 |
C8 |
C7 |
O7 |
180.0 |
120.0 |
| H8C2 |
C8 |
C7 |
N2 |
15.5 |
300.0 |
| C7 |
C8 |
H8C2 |
H8C1 |
166.7 |
240.0 |
| C7 |
C8 |
H8C2 |
H8C3 |
77.9 |
120.0 |
| H8C1 |
C8 |
H8C2 |
H8C3 |
271.2 |
240.0 |
| H8C3 |
C8 |
C7 |
O7 |
219.2 |
240.0 |
| H8C3 |
C8 |
C7 |
N2 |
54.7 |
60.0 |
| C7 |
C8 |
H8C3 |
H8C1 |
137.1 |
120.0 |
| C7 |
C8 |
H8C3 |
H8C2 |
241.9 |
240.1 |
| H8C1 |
C8 |
H8C3 |
H8C2 |
104.8 |
120.0 |
| H2 |
N2 |
CA |
HA |
217.5 |
210.0 |
| CA |
N2 |
H2 |
C7 |
180.0 |
180.0 |