PDB Chemical Component NJV

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NJV

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N6	N7	1.373	1.286
N6	C21	1.311	1.307
N7	C20	1.316	1.315
C17	C18	1.373	1.386
C17	C16	1.375	1.393
C21	N5	1.361	1.354
C18	C19	1.375	1.385
C20	C16	1.449	1.479
C20	N5	1.373	1.369
C16	NH1	1.336	1.329
N5	C22	1.453	1.465
C19	CZ	1.375	1.392
NH1	CZ	1.336	1.322
CZ	NE	1.401	1.393
C22	C23	1.509	1.529
C22	C24	1.503	1.530
NE	CD	1.375	1.348
O1	CD	1.224	1.215
CD	CG	1.465	1.476
F1	C1	1.341	1.351
CG	C1	1.373	1.398
CG	CB	1.373	1.396
C1	C6	1.368	1.383
CB	CA	1.371	1.384
C6	C	1.371	1.381
C8	N2	1.316	1.305
C8	N	1.363	1.359
CA	C	1.365	1.390
CA	N	1.381	1.404
C	C7	1.484	1.507
N2	C9	1.374	1.341
N	C10	1.365	1.370
C9	C10	1.371	1.347
C9	C11	1.486	1.507
C13	C11	1.497	1.530
C13	C12	1.498	1.530
C11	C12	1.499	1.530
C6	H1	1.080	1.080
C11	H2	1.100	1.091
C12	H3	1.100	1.090
C12	H4	1.100	1.091
CB	H5	1.080	1.081
NE	H6	1.000	0.971
C10	H7	1.080	1.081
C13	H8	1.100	1.090
C13	H9	1.100	1.090
C17	H10	1.080	1.080
C18	H11	1.080	1.080
C19	H12	1.080	1.079
C21	H13	1.080	1.079
C22	H14	1.100	1.090
C23	H15	1.100	1.090
C23	H16	1.100	1.090
C23	H17	1.100	1.090
C24	H18	1.100	1.090
C24	H19	1.100	1.090
C24	H20	1.100	1.090
C7	H21	1.100	1.090
C7	H22	1.100	1.090
C7	H23	1.100	1.090
C8	H24	1.080	1.079

Bond Angles for NJV

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N6	C21	H13	125.3	126.2
C17	C18	C19	118.8	118.6
C18	C17	H10	120.5	120.4
C17	C18	H11	120.6	120.6
C20	N5	C21	106.8	105.9
C21	N5	C22	120.3	127.0
N5	C21	H13	125.3	126.3
C19	C18	H11	120.6	120.7
C18	C19	H12	120.6	120.3
C20	N5	C22	132.9	127.1
C16	NH1	CZ	117.5	121.5
N5	C22	H14	105.4	109.4
CZ	NE	H6	116.3	119.9
C23	C22	C24	112.9	109.5
C23	C22	H14	104.8	109.5
C22	C23	H15	109.5	109.5
C22	C23	H16	109.5	109.5
C22	C23	H17	109.5	109.5
C24	C22	H14	104.9	109.5
C22	C24	H18	109.5	109.5
C22	C24	H19	109.5	109.5
C22	C24	H20	109.5	109.5
CG	CB	H5	120.3	120.1
C1	C6	C	119.4	120.2
C1	C6	H1	120.3	119.9
C6	C	CA	119.5	120.3
C6	C	C7	116.6	119.9
C	C6	H1	120.3	119.9
C8	N2	C9	105.4	109.4
N2	C8	H24	124.7	125.8
CA	C	C7	120.1	119.9
CA	N	C10	123.3	126.5
C	C7	H21	109.5	109.5
C	C7	H22	109.5	109.5
C	C7	H23	109.5	109.5
N	C10	H7	127.9	126.6
C9	C10	H7	127.9	126.5
C9	C11	H2	115.7	115.5
C13	C11	H2	115.5	117.5
C13	C12	H3	120.0	117.6
C13	C12	H4	120.0	117.5
C12	C11	H2	115.5	117.5
C11	C12	H3	120.0	117.5
C11	C12	H4	120.0	117.5
H3	C12	H4	109.4	115.5
H8	C13	H9	109.5	115.6
H15	C23	H16	109.5	109.5
H15	C23	H17	109.5	109.5
H16	C23	H17	109.5	109.5
H18	C24	H19	109.5	109.5
H18	C24	H20	109.5	109.4
H19	C24	H20	109.4	109.5
H21	C7	H22	109.4	109.4
H21	C7	H23	109.5	109.5
H22	C7	H23	109.5	109.5

Torsion Angles for NJV

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N7	N6	C21	H13	179.5	179.9
N5	C21	N6	H13	180.0	180.0
C19	C18	C17	H11	180.0	180.0
C17	C18	C19	H12	179.3	180.0
N6	C21	N5	H13	180.0	180.0
C20	N5	C21	C22	181.1	180.1
C21	N5	C22	H14	1.1	174.5
C19	C18	C17	H10	180.6	180.0
C17	C18	C19	H11	180.0	180.0
C21	N5	C20	C22	178.6	179.9
C20	N5	C21	H13	180.8	179.9
C20	N5	C22	H14	179.6	354.4
C20	N5	C22	C21	178.5	179.9
C22	N5	C21	H13	359.6	359.8
C23	C22	N5	H14	114.6	120.0
N5	C22	C23	H15	180.0	180.0
N5	C22	C23	H16	300.0	300.1
N5	C22	C23	H17	60.0	60.0
C24	C22	N5	H14	245.9	240.0
N5	C22	C24	H18	180.0	59.9
N5	C22	C24	H19	300.0	179.9
N5	C22	C24	H20	60.0	300.0
C19	CZ	NE	H6	195.9	5.7
NH1	CZ	NE	H6	14.0	185.7
C16	NH1	CZ	NE	180.6	180.0
C21	N5	C22	C23	115.7	294.5
C20	N5	C22	C23	294.2	114.4
N5	C22	C23	H14	245.0	240.0
C24	C22	C23	H14	113.6	120.0
C23	C22	C24	H18	312.0	180.0
C23	C22	C24	H19	72.0	300.0
C23	C22	C24	H20	192.0	60.1
H15	C23	C22	H16	240.0	240.0
H15	C23	C22	H17	120.0	120.0
H16	C23	C22	H17	240.0	240.0
C21	N5	C22	C24	247.0	54.5
C20	N5	C22	C24	65.5	234.4
N5	C22	C24	H14	114.4	119.9
C23	C22	C24	H14	246.4	240.0
C24	C22	C23	H15	48.6	60.0
C24	C22	C23	H16	168.6	180.0
C24	C22	C23	H17	288.6	300.0
H18	C24	C22	H19	240.0	240.0
H18	C24	C22	H20	120.1	119.9
H19	C24	C22	H20	240.1	239.9
CD	CG	CB	H5	346.2	0.0
F1	C1	C6	H1	356.5	359.7
CG	C1	C6	H1	176.6	180.0
C1	C6	C	CA	18.2	0.0
C1	C6	C	C7	176.4	180.0
C	C6	C1	H1	180.0	180.0
CB	CA	C	C7	170.7	180.0
CB	CA	N	C10	140.6	310.1
C1	C6	C	H1	180.0	180.0
CA	C	C6	C7	201.8	180.1
C6	C	C7	H21	100.2	90.0
C6	C	C7	H22	220.2	210.0
C6	C	C7	H23	340.2	330.0
C8	N	C10	H7	178.5	180.2
C6	C	CA	C7	157.4	179.9
CA	C	C6	H1	198.2	180.1
C	CA	N	C10	279.3	130.0
CA	C	C7	H21	258.2	270.0
CA	C	C7	H22	18.2	29.9
CA	C	C7	H23	138.2	149.9
C6	C	CA	N	191.5	180.0
CA	N	C10	H7	1.7	359.8
C6	C	C7	CA	202.0	180.1
C7	C	C6	H1	356.4	360.0
H21	C7	C	H22	240.0	240.0
H21	C7	C	H23	120.0	120.0
H22	C7	C	H23	240.0	240.0
C9	N2	C8	H24	178.7	180.0
N2	C9	C10	H7	180.7	179.7
N2	C9	C11	H2	197.8	51.0
C9	C10	N	H7	180.0	180.1
N	C10	C9	H7	180.0	179.9
C10	C9	C11	H2	17.1	230.6
C13	C11	C9	H2	145.9	145.7
C12	C11	C9	H2	216.0	214.4
C9	C11	C12	H3	140.6	360.0
C9	C11	C12	H4	359.5	144.9
C9	C11	C13	H2	214.0	214.9
C12	C11	C13	H2	106.0	107.5
C13	C11	C12	H3	250.5	107.6
C13	C11	C12	H4	109.5	252.5
C12	C13	C11	H2	254.0	252.5
C13	C12	C11	H2	106.0	107.5
C11	C12	C13	H3	250.5	107.5
C11	C12	C13	H4	109.5	252.5
H3	C12	C13	H4	219.0	145.0
C9	C11	C12	H2	144.1	144.9
C13	C11	C12	H2	254.0	252.5
C13	C12	C11	H3	109.5	252.4
C13	C12	C11	H4	250.5	107.5
H3	C12	C11	H4	141.1	215.1
C1	C6	H1	C	180.0	180.0
H1	C6	C	CA	198.2	180.1
H1	C6	C	C7	356.4	360.0
H2	C11	C12	H3	356.5	215.0
H2	C11	C12	H4	215.4	360.0
C13	C12	H3	H4	144.7	214.3
H3	C12	C11	H2	356.5	215.0
C11	C12	H3	H4	215.2	145.6
C13	C12	H4	H3	215.3	145.7
H4	C12	C11	H2	215.4	360.0
C11	C12	H4	H3	144.8	214.4
H8	C13	C11	H2	3.5	0.0
H8	C13	C12	H3	360.0	145.0
H8	C13	C12	H4	141.0	360.0
H9	C13	C11	H2	144.5	145.1
H9	C13	C12	H3	219.0	360.0
H9	C13	C12	H4	0.0	215.0
H10	C17	C18	C19	180.6	180.0
H10	C17	C18	H11	0.6	0.0
C17	C18	H11	C19	180.0	180.0
H11	C18	C17	H10	0.6	0.0
H11	C18	C19	H12	359.3	0.0
H12	C19	C18	H11	359.3	0.0
H13	C21	N5	C22	359.6	359.8
C23	C22	H14	C24	119.2	120.0
H14	C22	C23	H15	295.0	300.0
H14	C22	C23	H16	55.0	60.0
H14	C22	C23	H17	175.0	180.0
H14	C22	C24	H18	65.6	300.0
H14	C22	C24	H19	185.6	60.0
H14	C22	C24	H20	305.6	180.1
H15	C23	C22	C24	48.6	60.0
H15	C23	C22	H14	295.0	300.0
C22	C23	H15	H16	120.0	120.0
C22	C23	H15	H17	240.0	240.0
H16	C23	H15	H17	120.0	120.0
H16	C23	C22	C24	168.6	180.0
H16	C23	C22	H14	55.0	60.0
C22	C23	H16	H15	240.0	240.0
C22	C23	H16	H17	120.0	120.0
H15	C23	H16	H17	240.0	240.0
H17	C23	C22	C24	288.6	300.0
H17	C23	C22	H14	175.0	180.0
C22	C23	H17	H15	120.0	120.0
C22	C23	H17	H16	240.0	240.0
H15	C23	H17	H16	120.0	120.0
H18	C24	C22	H14	65.6	300.0
C22	C24	H18	H19	120.0	120.1
C22	C24	H18	H20	240.0	240.0
H19	C24	H18	H20	120.0	120.0
H19	C24	C22	H14	185.6	60.0
C22	C24	H19	H18	240.0	240.0
C22	C24	H19	H20	120.0	120.1
H18	C24	H19	H20	240.0	240.1
H20	C24	C22	H14	305.6	180.1
C22	C24	H20	H18	120.0	120.0
C22	C24	H20	H19	240.0	239.9
H18	C24	H20	H19	120.0	119.9
C	C7	H21	H22	120.0	120.0
C	C7	H21	H23	240.0	240.0
H22	C7	H21	H23	120.0	120.0
C	C7	H22	H21	240.0	240.0
C	C7	H22	H23	120.0	120.0
H21	C7	H22	H23	240.0	240.0
C	C7	H23	H21	120.1	120.0
C	C7	H23	H22	240.0	240.0
H21	C7	H23	H22	119.9	120.0
H24	C8	N2	C9	178.7	180.0