PDB Chemical Component NIU

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NIU

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CA CA2 1.426 1.399
CA CA6 1.384 1.383
CA CG1 1.547 1.508
CA2 OA2 1.182 1.219
CA2 OA3 1.356 1.344
OA3 CA4 1.403 1.345
CA4 CA5 1.411 1.334
CA4 CD1 1.538 1.515
CA5 CA6 1.412 1.414
CA5 CD5 1.514 1.514
CA6 OA6 1.381 1.353
OA6 HO6 0.950 0.967
CB1 CB2 1.422 1.383
CB1 CB6 1.426 1.382
CB1 CG1 1.540 1.506
CB2 CB3 1.409 1.382
CB2 HB2 1.103 1.080
CB3 CB4 1.409 1.382
CB3 HB3 1.103 1.080
CB4 CB5 1.399 1.383
CB4 HB4 1.103 1.080
CB5 CB6 1.405 1.382
CB5 HB5 1.104 1.080
CB6 HB6 1.103 1.079
CG1 CG2 1.536 1.530
CG1 HG1 1.115 1.090
CG2 CG3 1.528 1.530
CG2 HG21 1.115 1.090
CG2 HG22 1.114 1.091
CG3 HG31 1.115 1.090
CG3 HG32 1.115 1.090
CG3 HG33 1.116 1.090
CD1 CD2 1.529 1.529
CD1 HD11 1.114 1.090
CD1 HD12 1.115 1.090
CD2 CD3 1.538 1.517
CD2 HD21 1.115 1.090
CD2 HD22 1.115 1.090
CD3 CD4 1.545 1.517
CD3 HD31 1.116 1.090
CD3 HD32 1.114 1.090
CD4 CD5 1.542 1.530
CD4 HD41 1.115 1.090
CD4 HD42 1.114 1.090
CD5 HD51 1.115 1.089
CD5 HD52 1.114 1.090

Bond Angles for NIU

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CA2 CA CA6 119.3 118.9
CA2 CA CG1 122.2 120.6
CA CA2 OA2 120.6 120.0
CA CA2 OA3 123.3 120.2
CA6 CA CG1 118.4 120.6
CA CA6 CA5 120.1 118.3
CA CA6 OA6 117.3 120.9
CA CG1 CB1 114.5 109.5
CA CG1 CG2 115.8 109.4
CA CG1 HG1 103.1 109.4
OA2 CA2 OA3 116.0 119.8
CA2 OA3 CA4 115.6 121.2
OA3 CA4 CA5 124.7 121.1
OA3 CA4 CD1 113.3 119.0
CA5 CA4 CD1 122.0 120.0
CA4 CA5 CA6 116.9 120.3
CA4 CA5 CD5 121.3 120.4
CA4 CD1 CD2 118.6 108.6
CA4 CD1 HD11 108.9 109.7
CA4 CD1 HD12 108.9 109.6
CA6 CA5 CD5 121.8 119.3
CA5 CA6 OA6 122.6 120.8
CA5 CD5 CD4 113.2 108.6
CA5 CD5 HD51 110.8 109.6
CA5 CD5 HD52 110.8 109.6
CA6 OA6 HO6 117.2 106.8
CB2 CB1 CB6 119.5 120.0
CB2 CB1 CG1 119.6 120.0
CB1 CB2 CB3 119.5 120.0
CB1 CB2 HB2 120.7 120.0
CB6 CB1 CG1 120.9 120.0
CB1 CB6 CB5 119.7 120.0
CB1 CB6 HB6 120.9 120.0
CB1 CG1 CG2 115.7 109.5
CB1 CG1 HG1 103.3 109.5
CB3 CB2 HB2 119.8 120.0
CB2 CB3 CB4 120.7 120.0
CB2 CB3 HB3 119.6 120.1
CB4 CB3 HB3 119.6 120.0
CB3 CB4 CB5 119.7 120.0
CB3 CB4 HB4 120.5 120.0
CB5 CB4 HB4 119.8 120.0
CB4 CB5 CB6 120.9 120.0
CB4 CB5 HB5 119.3 120.0
CB6 CB5 HB5 119.8 120.0
CB5 CB6 HB6 119.4 120.0
CG2 CG1 HG1 101.6 109.4
CG1 CG2 CG3 116.9 109.5
CG1 CG2 HG21 109.5 109.5
CG1 CG2 HG22 109.5 109.5
CG3 CG2 HG21 109.5 109.5
CG3 CG2 HG22 109.5 109.5
CG2 CG3 HG31 117.0 109.4
CG2 CG3 HG32 109.5 109.4
CG2 CG3 HG33 109.5 109.4
HG21 CG2 HG22 100.7 109.4
HG31 CG3 HG32 109.5 109.5
HG31 CG3 HG33 109.4 109.5
HG32 CG3 HG33 100.6 109.5
CD2 CD1 HD11 109.0 109.5
CD2 CD1 HD12 109.0 109.6
CD1 CD2 CD3 116.1 110.9
CD1 CD2 HD21 109.8 109.1
CD1 CD2 HD22 109.8 109.2
HD11 CD1 HD12 101.2 109.8
CD3 CD2 HD21 109.8 109.2
CD3 CD2 HD22 109.8 109.2
CD2 CD3 CD4 115.5 114.0
CD2 CD3 HD31 110.0 108.6
CD2 CD3 HD32 110.1 108.5
HD21 CD2 HD22 100.5 109.1
CD4 CD3 HD31 110.0 108.6
CD4 CD3 HD32 110.0 108.7
CD3 CD4 CD5 115.8 110.8
CD3 CD4 HD41 109.9 109.2
CD3 CD4 HD42 109.9 109.2
HD31 CD3 HD32 100.2 108.3
CD5 CD4 HD41 109.9 109.2
CD5 CD4 HD42 109.9 109.2
CD4 CD5 HD51 110.9 109.6
CD4 CD5 HD52 110.8 109.6
HD41 CD4 HD42 100.3 109.2
HD51 CD5 HD52 99.5 109.8

Torsion Angles for NIU

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CA6 CA CA2 CG1 176.7 179.7
CA2 CA CA6 CA5 359.5 0.3
CA2 CA CA6 OA6 178.5 180.3
CA2 CA CG1 CB1 57.2 73.7
CA2 CA CG1 CG2 278.6 313.7
CA2 CA CG1 HG1 168.7 193.8
OA2 CA2 CA OA3 177.9 180.6
CA CA2 OA3 CA4 359.8 0.6
CA2 CA CA6 CG1 183.2 180.3
CA6 CA CA2 OA2 178.3 180.0
CA6 CA CA2 OA3 0.4 359.5
CA6 CA CG1 CB1 240.5 254.0
CA6 CA CG1 CG2 101.9 134.0
CA6 CA CG1 HG1 352.0 14.1
CA4 CA5 CA6 CA 0.3 359.8
CA CA6 CA5 CD5 181.1 179.6
CA5 CA6 CA OA6 181.0 180.0
CA CA6 OA6 HO6 180.0 3.2
CA2 CA CG1 CA6 176.7 179.7
CG1 CA CA2 OA2 1.7 0.4
CG1 CA CA2 OA3 183.8 179.8
CG1 CA CA6 CA5 176.3 180.0
CG1 CA CA6 OA6 355.3 0.0
CB2 CB1 CG1 CA 74.6 97.8
CB6 CB1 CG1 CA 254.2 277.5
CB1 CG1 CA CG2 138.5 120.0
CB1 CG1 CA HG1 248.5 239.9
CG2 CG1 CA HG1 110.0 119.9
CA CG1 CG2 CG3 68.3 185.4
CA CG1 CG2 HG21 193.5 65.4
CA CG1 CG2 HG22 303.0 305.4
OA2 CA2 CA CA6 178.3 180.0
OA2 CA2 CA CG1 1.7 0.4
CA CA2 OA2 OA3 182.0 179.4
OA2 CA2 OA3 CA4 181.8 180.0
OA3 CA2 CA CA6 0.4 359.5
OA3 CA2 CA CG1 183.8 179.8
CA CA2 OA3 OA2 178.0 180.6
CA2 OA3 CA4 CA5 0.0 359.6
CA2 OA3 CA4 CD1 179.9 179.6
CA5 CA4 OA3 CD1 180.1 179.9
OA3 CA4 CA5 CA6 360.0 0.3
OA3 CA4 CA5 CD5 179.1 180.4
OA3 CA4 CD1 CD2 232.1 251.0
OA3 CA4 CD1 HD11 357.4 10.7
OA3 CA4 CD1 HD12 106.9 131.3
CA CA6 CA5 CA4 0.3 359.8
OA3 CA4 CA5 CD1 179.9 180.1
CA5 CA4 CD1 CD2 52.0 71.1
CA5 CA4 CD1 HD11 177.3 190.7
CA5 CA4 CD1 HD12 286.8 311.3
CA6 CA5 CA4 CD5 180.8 179.8
CA4 CA5 CA6 OA6 181.3 179.8
CA4 CA5 CD5 CD4 291.4 288.4
CA4 CA5 CD5 HD51 56.7 48.1
CA4 CA5 CD5 HD52 166.2 168.7
OA3 CA4 CD1 CA5 180.1 179.9
CD1 CA4 CA5 CA6 180.1 180.2
CD1 CA4 CA5 CD5 359.2 0.4
CD2 CD1 CA4 HD11 234.8 240.3
CD2 CD1 CA4 HD12 125.3 119.7
CA4 CD1 CD2 CD3 356.9 274.2
CA4 CD1 CD2 HD21 122.1 34.5
CA4 CD1 CD2 HD22 231.7 153.7
HD11 CD1 CA4 HD12 250.5 239.4
CA5 CA6 CA CG1 176.3 180.0
CA CA6 CA5 OA6 178.9 180.0
CA6 CA5 CA4 CD1 180.1 180.2
CA4 CA5 CA6 CD5 179.2 180.2
CA6 CA5 CD5 CD4 110.5 108.5
CA6 CA5 CD5 HD51 235.8 228.3
CA6 CA5 CD5 HD52 345.3 348.9
CA5 CA6 OA6 HO6 358.9 183.2
CD5 CA5 CA4 CD1 359.2 0.4
CA4 CA5 CD5 CA6 180.9 179.8
CD5 CA5 CA6 OA6 2.2 359.6
CD3 CD4 CD5 CA5 38.9 85.7
CA5 CD5 CD4 HD41 273.7 325.4
CA5 CD5 CD4 HD42 164.2 206.0
CD4 CD5 CA5 HD51 234.7 240.3
CD4 CD5 CA5 HD52 125.2 119.7
HD51 CD5 CA5 HD52 250.5 239.4
OA6 CA6 CA CG1 355.3 0.0
CA CA6 OA6 CA5 181.0 180.0
OA6 CA6 CA5 CD5 2.2 359.6
CA CG1 CB1 CB2 74.6 97.8
CB6 CB1 CB2 CG1 180.4 180.3
CB2 CB1 CB6 CB5 1.0 359.5
CB2 CB1 CB6 HB6 181.0 180.0
CB2 CB1 CG1 CG2 213.2 217.8
CB2 CB1 CG1 HG1 323.2 337.8
CB3 CB2 CB1 HB2 180.0 179.9
CB1 CB2 CB3 CB4 1.0 0.0
CB1 CB2 CB3 HB3 181.0 179.9
CA CG1 CB1 CB6 254.2 277.5
CB2 CB1 CB6 CG1 179.6 179.7
CB6 CB1 CB2 CB3 358.9 0.3
CB6 CB1 CB2 HB2 178.9 180.3
CB6 CB1 CG1 CG2 32.8 37.5
CB6 CB1 CG1 HG1 142.8 157.5
CB4 CB5 CB6 CB1 359.3 0.5
CB1 CB6 CB5 HB5 179.2 180.2
CB5 CB6 CB1 HB6 180.0 179.5
CA CG1 CB1 CG2 221.4 240.0
CA CG1 CB1 HG1 111.4 120.0
CB2 CB1 CG1 CB6 180.4 180.3
CG1 CB1 CB2 CB3 178.5 180.0
CG1 CB1 CB2 HB2 358.5 0.0
CG1 CB1 CB6 CB5 181.4 179.8
CG1 CB1 CB6 HB6 1.4 0.3
CG2 CG1 CB1 HG1 250.0 240.0
CB1 CG1 CG2 CG3 290.3 65.4
CB1 CG1 CG2 HG21 55.5 305.4
CB1 CG1 CG2 HG22 165.0 185.5
CB3 CB2 CB1 CB6 358.9 0.3
CB3 CB2 CB1 CG1 178.5 180.0
CB1 CB2 CB3 HB2 180.0 180.1
CB4 CB3 CB2 HB3 180.0 180.1
CB2 CB3 CB4 CB5 359.3 359.9
CB2 CB3 CB4 HB4 179.3 179.9
HB2 CB2 CB1 CB6 178.9 180.3
HB2 CB2 CB1 CG1 358.5 0.0
CB1 CB2 HB2 CB3 180.0 179.9
HB2 CB2 CB3 CB4 180.9 180.0
HB2 CB2 CB3 HB3 1.0 359.9
CB4 CB3 CB2 HB2 180.9 180.0
CB2 CB3 CB4 HB3 180.0 179.9
CB5 CB4 CB3 HB4 180.0 180.0
CB3 CB4 CB5 CB6 0.5 359.8
CB3 CB4 CB5 HB5 180.6 180.0
HB3 CB3 CB2 HB2 1.0 359.9
CB2 CB3 HB3 CB4 180.0 180.1
HB3 CB3 CB4 CB5 179.3 180.0
HB3 CB3 CB4 HB4 359.3 0.0
CB1 CB6 CB5 CB4 359.3 0.5
CB5 CB4 CB3 HB3 179.3 180.0
CB3 CB4 CB5 HB4 180.0 180.0
CB6 CB5 CB4 HB5 180.0 179.8
CB4 CB5 CB6 HB6 179.3 180.0
HB4 CB4 CB3 HB3 359.3 0.0
CB3 CB4 HB4 CB5 180.0 180.0
HB4 CB4 CB5 CB6 180.5 179.8
HB4 CB4 CB5 HB5 0.6 0.0
CB5 CB6 CB1 CG1 181.4 179.8
CB1 CB6 CB5 HB6 180.0 180.5
CB6 CB5 CB4 HB4 180.5 179.8
CB4 CB5 CB6 HB5 180.1 180.2
HB5 CB5 CB4 HB4 0.6 0.0
CB4 CB5 HB5 CB6 180.0 179.8
HB5 CB5 CB6 HB6 359.2 359.8
HB6 CB6 CB1 CG1 1.4 0.3
CB1 CB6 HB6 CB5 180.0 179.5
HB6 CB6 CB5 HB5 359.2 359.8
CA CG1 CG2 CB1 138.1 120.0
CA CG1 CG2 HG1 249.1 240.1
CB1 CG1 CG2 HG1 111.0 120.1
CG3 CG2 CG1 HG21 234.8 120.0
CG3 CG2 CG1 HG22 125.3 239.9
CG1 CG2 CG3 HG31 180.0 180.0
CG1 CG2 CG3 HG32 305.3 300.0
CG1 CG2 CG3 HG33 54.8 60.0
HG21 CG2 CG1 HG22 250.5 119.9
CA CG1 HG1 CB1 240.4 240.0
CA CG1 HG1 CG2 120.3 119.9
CB1 CG1 HG1 CG2 239.8 240.0
HG1 CG1 CG2 CG3 179.2 305.3
HG1 CG1 CG2 HG21 304.4 185.3
HG1 CG1 CG2 HG22 53.9 65.4
CG3 CG2 CG1 HG1 179.2 305.3
CG1 CG2 CG3 HG21 125.2 240.0
CG1 CG2 CG3 HG22 234.8 120.0
HG21 CG2 CG3 HG22 109.6 240.0
HG31 CG3 CG2 HG32 234.7 240.0
HG31 CG3 CG2 HG33 125.2 120.0
HG32 CG3 CG2 HG33 250.5 240.0
HG21 CG2 CG1 HG1 304.4 185.3
CG1 CG2 HG21 CG3 230.6 120.0
CG1 CG2 HG21 HG22 115.3 240.0
CG3 CG2 HG21 HG22 244.7 120.0
HG21 CG2 CG3 HG31 54.8 300.0
HG21 CG2 CG3 HG32 180.1 60.0
HG21 CG2 CG3 HG33 289.5 180.0
HG22 CG2 CG1 HG1 53.9 65.4
CG1 CG2 HG22 CG3 129.4 240.0
CG1 CG2 HG22 HG21 244.7 120.0
CG3 CG2 HG22 HG21 115.3 240.0
HG22 CG2 CG3 HG31 305.2 60.0
HG22 CG2 CG3 HG32 70.5 179.9
HG22 CG2 CG3 HG33 180.0 300.0
HG31 CG3 CG2 HG21 54.8 300.0
HG31 CG3 CG2 HG22 305.2 60.0
CG2 CG3 HG31 HG32 125.3 119.9
CG2 CG3 HG31 HG33 234.7 240.0
HG32 CG3 HG31 HG33 109.4 120.1
HG32 CG3 CG2 HG21 180.1 60.0
HG32 CG3 CG2 HG22 70.5 179.9
CG2 CG3 HG32 HG31 230.5 240.1
CG2 CG3 HG32 HG33 115.3 120.0
HG31 CG3 HG32 HG33 244.8 239.9
HG33 CG3 CG2 HG21 289.5 180.0
HG33 CG3 CG2 HG22 180.0 300.0
CG2 CG3 HG33 HG31 129.4 120.0
CG2 CG3 HG33 HG32 244.7 240.0
HG31 CG3 HG33 HG32 115.2 120.1
CA4 CD1 CD2 HD11 125.2 119.7
CA4 CD1 CD2 HD12 234.8 240.2
HD11 CD1 CD2 HD12 109.6 120.5
CD3 CD2 CD1 HD21 234.8 239.7
CD3 CD2 CD1 HD22 125.2 120.4
CD1 CD2 CD3 CD4 291.1 67.4
CD1 CD2 CD3 HD31 56.3 188.6
CD1 CD2 CD3 HD32 165.8 306.1
HD21 CD2 CD1 HD22 250.4 240.7
CA4 CD1 HD11 CD2 229.3 240.9
CA4 CD1 HD11 HD12 114.6 120.5
CD2 CD1 HD11 HD12 245.3 239.6
HD11 CD1 CD2 CD3 231.7 154.4
HD11 CD1 CD2 HD21 356.9 274.7
HD11 CD1 CD2 HD22 106.5 34.0
CA4 CD1 HD12 CD2 130.7 119.1
CA4 CD1 HD12 HD11 245.4 239.5
CD2 CD1 HD12 HD11 114.7 120.3
HD12 CD1 CD2 CD3 122.1 33.9
HD12 CD1 CD2 HD21 247.4 154.2
HD12 CD1 CD2 HD22 356.9 273.5
CD3 CD2 CD1 HD11 231.7 154.4
CD3 CD2 CD1 HD12 122.1 33.9
CD1 CD2 CD3 HD21 125.2 120.3
CD1 CD2 CD3 HD22 234.8 239.6
HD21 CD2 CD3 HD22 109.6 119.3
CD4 CD3 CD2 HD31 234.8 238.8
CD4 CD3 CD2 HD32 125.3 121.2
CD2 CD3 CD4 CD5 47.1 292.8
CD2 CD3 CD4 HD41 172.3 53.1
CD2 CD3 CD4 HD42 281.8 172.5
HD31 CD3 CD2 HD32 250.5 242.4
HD21 CD2 CD1 HD11 356.9 274.7
HD21 CD2 CD1 HD12 247.4 154.2
CD1 CD2 HD21 CD3 231.2 238.6
CD1 CD2 HD21 HD22 115.6 119.3
CD3 CD2 HD21 HD22 244.4 240.7
HD21 CD2 CD3 CD4 165.9 307.1
HD21 CD2 CD3 HD31 291.1 68.3
HD21 CD2 CD3 HD32 40.6 185.8
HD22 CD2 CD1 HD11 106.5 34.0
HD22 CD2 CD1 HD12 356.9 273.5
CD1 CD2 HD22 CD3 128.8 121.4
CD1 CD2 HD22 HD21 244.4 240.7
CD3 CD2 HD22 HD21 115.6 119.3
HD22 CD2 CD3 CD4 56.3 187.8
HD22 CD2 CD3 HD31 181.6 309.0
HD22 CD2 CD3 HD32 291.1 66.5
CA5 CD5 CD4 CD3 38.9 85.7
CD4 CD3 CD2 HD21 165.9 307.1
CD4 CD3 CD2 HD22 56.3 187.8
CD2 CD3 CD4 HD31 125.2 121.2
CD2 CD3 CD4 HD32 234.7 238.8
HD31 CD3 CD4 HD32 109.4 117.7
CD5 CD4 CD3 HD41 234.8 239.6
CD5 CD4 CD3 HD42 125.3 120.3
CD3 CD4 CD5 HD51 273.6 326.0
CD3 CD4 CD5 HD52 164.2 205.4
HD41 CD4 CD3 HD42 250.5 240.7
HD31 CD3 CD2 HD21 291.1 68.3
HD31 CD3 CD2 HD22 181.6 309.0
CD2 CD3 HD31 CD4 231.7 235.6
CD2 CD3 HD31 HD32 115.9 117.7
CD4 CD3 HD31 HD32 244.2 242.1
HD31 CD3 CD4 CD5 281.9 171.6
HD31 CD3 CD4 HD41 47.1 292.0
HD31 CD3 CD4 HD42 156.6 51.3
HD32 CD3 CD2 HD21 40.6 185.8
HD32 CD3 CD2 HD22 291.1 66.5
CD2 CD3 HD32 CD4 128.4 124.5
CD2 CD3 HD32 HD31 244.2 242.3
CD4 CD3 HD32 HD31 115.8 117.8
HD32 CD3 CD4 CD5 172.4 53.9
HD32 CD3 CD4 HD41 297.7 174.3
HD32 CD3 CD4 HD42 47.1 293.6
CA5 CD5 CD4 HD51 125.3 119.7
CA5 CD5 CD4 HD52 234.8 240.3
CD5 CD4 CD3 HD31 281.9 171.6
CD5 CD4 CD3 HD32 172.4 53.9
CD3 CD4 CD5 HD41 125.3 120.3
CD3 CD4 CD5 HD42 234.7 239.7
HD41 CD4 CD5 HD42 109.4 119.4
HD51 CD5 CD4 HD52 109.5 120.6
HD41 CD4 CD3 HD31 47.1 292.0
HD41 CD4 CD3 HD32 297.7 174.3
CD3 CD4 HD41 CD5 231.5 238.7
CD3 CD4 HD41 HD42 115.8 119.3
CD5 CD4 HD41 HD42 244.3 240.6
HD41 CD4 CD5 HD51 148.4 205.6
HD41 CD4 CD5 HD52 38.9 85.0
HD42 CD4 CD3 HD31 156.6 51.3
HD42 CD4 CD3 HD32 47.1 293.6
CD3 CD4 HD42 CD5 128.6 121.3
CD3 CD4 HD42 HD41 244.2 240.7
CD5 CD4 HD42 HD41 115.7 119.4
HD42 CD4 CD5 HD51 38.9 86.2
HD42 CD4 CD5 HD52 289.4 325.6
CA5 CD5 HD51 CD4 233.4 240.9
CA5 CD5 HD51 HD52 116.7 120.4
HD51 CD5 CD4 HD41 148.4 205.6
HD51 CD5 CD4 HD42 38.9 86.2
CD4 CD5 HD51 HD52 243.3 239.5
CA5 CD5 HD52 CD4 126.5 119.0
CA5 CD5 HD52 HD51 243.3 239.5
HD52 CD5 CD4 HD41 38.9 85.0
HD52 CD5 CD4 HD42 289.4 325.6
CD4 CD5 HD52 HD51 116.7 120.5