PDB Chemical Component NIL

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NIL

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O17	C16	1.207	1.216
C16	N14	1.342	1.347
C16	C18	1.476	1.478
N14	C11	1.389	1.399
C11	C9	1.417	1.388
C11	C12	1.412	1.390
C9	C8	1.398	1.387
C8	N51	1.403	1.402
C8	C6	1.391	1.389
N51	C56	1.394	1.370
N51	C52	1.338	1.359
C56	C55	1.351	1.346
C55	C58	1.510	1.507
C55	N54	1.352	1.341
N54	C52	1.311	1.305
C6	C5	1.397	1.382
C12	C5	1.424	1.381
C5	C2	1.494	1.506
C2	F4	1.348	1.400
C2	F3	1.328	1.400
C2	F1	1.349	1.398
C18	C25	1.403	1.396
C18	C19	1.371	1.396
C25	C23	1.396	1.380
C23	C22	1.386	1.382
C22	C27	1.522	1.507
C22	C21	1.394	1.390
C21	C19	1.401	1.386
C21	N31	1.401	1.398
N31	C33	1.396	1.385
C33	N40	1.327	1.325
C33	N34	1.358	1.324
N40	C38	1.347	1.324
C38	C36	1.342	1.383
C36	C35	1.350	1.398
C35	N34	1.338	1.330
C35	C41	1.486	1.483
C41	C49	1.404	1.397
C41	C42	1.409	1.394
C49	C47	1.389	1.385
C47	C45	1.394	1.384
C45	N44	1.343	1.319
N44	C42	1.339	1.317
N14	HN14	1.000	0.970
C9	H9	1.080	1.080
C56	H56	1.080	1.080
C58	H58	1.100	1.091
C58	H58A	1.101	1.090
C58	H58B	1.100	1.089
C52	H52	1.080	1.079
C6	H6	1.080	1.080
C12	H12	1.080	1.080
C25	H25	1.080	1.080
C23	H23	1.080	1.079
C27	H27	1.100	1.090
C27	H27A	1.100	1.091
C27	H27B	1.100	1.090
C19	H19	1.080	1.080
N31	HN31	1.000	0.970
C38	H38	1.081	1.080
C36	H36	1.080	1.080
C49	H49	1.080	1.080
C47	H47	1.080	1.080
C45	H45	1.080	1.079
C42	H42	1.080	1.080

Bond Angles for NIL

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O17	C16	N14	127.1	120.0
O17	C16	C18	115.4	120.0
N14	C16	C18	116.2	120.0
C16	N14	C11	126.0	120.0
C16	N14	HN14	117.0	120.0
C16	C18	C25	124.8	120.1
C16	C18	C19	117.5	120.1
N14	C11	C9	120.9	120.0
N14	C11	C12	120.6	120.0
C11	N14	HN14	117.0	119.9
C9	C11	C12	118.3	120.0
C11	C9	C8	121.3	119.8
C11	C9	H9	119.3	120.1
C11	C12	C5	120.0	120.0
C11	C12	H12	120.0	120.0
C9	C8	N51	121.7	120.0
C9	C8	C6	119.5	119.9
C8	C9	H9	119.4	120.1
N51	C8	C6	118.7	120.1
C8	N51	C56	128.9	126.5
C8	N51	C52	126.8	126.4
C8	C6	C5	121.0	120.1
C8	C6	H6	119.5	120.0
C56	N51	C52	104.2	107.1
N51	C56	C55	108.2	106.9
N51	C56	H56	125.9	126.6
N51	C52	N54	112.5	108.5
N51	C52	H52	123.8	125.8
C56	C55	C58	128.0	125.9
C56	C55	N54	107.9	108.2
C55	C56	H56	125.9	126.6
C58	C55	N54	124.1	125.9
C55	C58	H58	109.5	109.5
C55	C58	H58A	109.4	109.4
C55	C58	H58B	109.4	109.5
C55	N54	C52	107.2	109.4
N54	C52	H52	123.8	125.7
C6	C5	C12	119.5	120.1
C6	C5	C2	121.6	119.9
C5	C6	H6	119.5	119.9
C12	C5	C2	118.9	120.0
C5	C12	H12	120.0	120.0
C5	C2	F4	115.0	109.4
C5	C2	F3	111.1	109.5
C5	C2	F1	112.3	109.5
F4	C2	F3	101.9	109.5
F4	C2	F1	103.4	109.4
F3	C2	F1	112.5	109.5
C25	C18	C19	116.3	119.7
C18	C25	C23	121.4	120.0
C18	C25	H25	119.3	120.0
C18	C19	C21	122.8	119.8
C18	C19	H19	118.6	120.1
C25	C23	C22	121.2	120.2
C23	C25	H25	119.3	120.0
C25	C23	H23	119.4	119.9
C23	C22	C27	120.7	119.9
C23	C22	C21	117.6	120.2
C22	C23	H23	119.4	119.9
C27	C22	C21	121.7	119.9
C22	C27	H27	109.5	109.5
C22	C27	H27A	109.5	109.5
C22	C27	H27B	109.5	109.5
C22	C21	C19	120.3	120.0
C22	C21	N31	118.4	120.0
C19	C21	N31	120.6	120.0
C21	C19	H19	118.6	120.1
C21	N31	C33	119.5	120.0
C21	N31	HN31	120.3	120.0
N31	C33	N40	128.9	119.1
N31	C33	N34	107.7	119.2
C33	N31	HN31	120.3	120.0
N40	C33	N34	123.4	121.7
C33	N40	C38	116.7	121.0
C33	N34	C35	117.7	120.6
N40	C38	C36	122.6	119.3
N40	C38	H38	118.7	120.4
C38	C36	C35	118.4	118.4
C36	C38	H38	118.7	120.3
C38	C36	H36	120.8	120.8
C36	C35	N34	121.1	119.0
C36	C35	C41	123.2	120.5
C35	C36	H36	120.8	120.8
N34	C35	C41	115.6	120.5
C35	C41	C49	121.6	120.5
C35	C41	C42	120.5	120.5
C49	C41	C42	117.9	118.9
C41	C49	C47	119.1	118.3
C41	C49	H49	120.4	120.9
C41	C42	N44	123.3	120.6
C41	C42	H42	118.4	119.7
C49	C47	C45	118.4	119.3
C47	C49	H49	120.5	120.8
C49	C47	H47	120.8	120.4
C47	C45	N44	123.8	121.0
C45	C47	H47	120.8	120.3
C47	C45	H45	118.1	119.4
C45	N44	C42	117.5	121.9
N44	C45	H45	118.1	119.6
N44	C42	H42	118.3	119.7
H58	C58	H58A	109.5	109.5
H58	C58	H58B	109.4	109.5
H58A	C58	H58B	109.5	109.5
H27	C27	H27A	109.4	109.4
H27	C27	H27B	109.5	109.4
H27A	C27	H27B	109.5	109.4

Torsion Angles for NIL

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
N14	C16	O17	C18	193.6	180.3
O17	C16	N14	C11	350.5	356.0
O17	C16	N14	HN14	170.5	176.0
O17	C16	C18	C25	191.7	180.0
O17	C16	C18	C19	357.9	359.7
O17	C16	N14	C18	166.3	179.7
N14	C16	C18	C25	359.6	359.7
N14	C16	C18	C19	165.8	179.5
C16	N14	C11	C9	205.2	35.2
C16	N14	C11	C12	31.0	215.0
C11	N14	C16	HN14	180.0	180.0
O17	C16	C18	N14	192.1	180.3
C18	C16	N14	C11	184.2	176.3
C18	C16	N14	HN14	4.2	356.3
C25	C18	C16	C19	193.8	180.2
C16	C18	C25	C23	173.9	180.0
C16	C18	C25	H25	354.0	0.0
C16	C18	C19	C21	186.2	179.7
C16	C18	C19	H19	6.2	359.9
C11	N14	C16	C18	184.2	176.3
C16	N14	C11	HN14	180.0	180.0
C9	C11	N14	C12	174.2	180.2
N14	C11	C9	C8	179.5	180.0
N14	C11	C9	H9	359.5	0.1
N14	C11	C12	C5	181.5	179.7
N14	C11	C12	H12	1.4	359.9
N14	C11	C9	C12	185.6	179.8
C9	C11	N14	HN14	25.2	215.2
C9	C11	C12	C5	7.1	359.5
C9	C11	C12	H12	187.1	179.7
C11	C9	C8	N51	182.0	180.1
C11	C9	C8	C6	3.7	360.0
C8	C9	C11	H9	180.0	180.0
N14	C11	C12	C9	174.4	180.2
C12	C11	N14	HN14	211.0	35.0
C12	C11	C9	C8	353.9	0.2
C12	C11	C9	H9	173.9	180.3
C6	C5	C12	C11	354.2	0.6
C11	C12	C5	C2	177.3	180.3
C5	C12	C11	H12	180.0	179.7
C8	C9	C11	C12	353.9	0.2
C11	C9	C8	H9	180.0	180.0
N51	C8	C9	C6	178.3	180.1
C9	C8	N51	C56	338.3	359.9
C9	C8	N51	C52	163.4	179.7
C9	C8	C6	C5	357.7	0.0
C9	C8	C6	H6	177.7	180.0
C9	C8	N51	C6	181.7	179.9
N51	C8	C9	H9	2.0	0.1
N51	C8	C6	C5	179.4	179.9
N51	C8	C6	H6	359.4	359.9
C56	N51	C8	C52	175.0	180.3
C8	N51	C56	C55	183.9	180.0
C8	N51	C56	H56	3.9	360.0
C8	N51	C52	N54	177.7	179.8
C8	N51	C52	H52	357.7	360.0
C9	C8	C6	N51	178.4	180.1
C6	C8	C9	H9	183.7	179.9
C6	C8	N51	C56	156.7	180.0
C6	C8	N51	C52	341.7	359.8
C8	C6	C5	C12	3.3	359.7
C8	C6	C5	C2	180.1	179.9
C5	C6	C8	H6	180.0	180.0
C56	N51	C8	C6	156.7	180.0
C8	N51	C56	C52	184.2	179.8
C56	N51	C52	N54	1.8	359.6
C56	N51	C52	H52	181.8	179.7
N51	C56	C55	C58	180.9	180.0
N51	C56	C55	N54	358.7	360.0
C55	C56	N51	H56	180.0	180.1
C52	N51	C8	C6	341.7	359.8
C8	N51	C52	C56	176.0	180.2
C52	N51	C56	C55	359.8	0.3
C52	N51	C56	H56	179.8	180.2
C55	N54	C52	N51	357.3	0.4
N54	C52	N51	H52	180.0	179.9
C55	C56	N51	C52	359.8	0.3
N51	C56	C55	H56	180.0	179.9
C58	C55	C56	N54	182.3	180.0
C56	C55	C58	H58	57.4	90.0
C56	C55	C58	H58A	177.4	209.9
C56	C55	C58	H58B	297.4	330.0
C56	C55	N54	C52	2.4	359.8
C56	C55	C58	N54	177.4	179.9
C58	C55	C56	H56	1.0	0.1
C58	C55	N54	C52	180.2	179.7
H58	C58	C55	H58A	240.0	240.0
H58	C58	C55	H58B	120.0	120.0
H58A	C58	C55	H58B	240.0	240.0
N51	C52	N54	C55	357.3	0.4
C56	C55	N54	C58	182.2	180.0
N54	C55	C56	H56	178.7	180.0
N54	C55	C58	H58	240.0	270.0
N54	C55	C58	H58A	0.0	30.0
N54	C55	C58	H58B	120.0	150.0
C55	N54	C52	H52	177.4	180.2
N51	C52	N54	H52	180.0	180.1
C11	C12	C5	C6	354.2	0.6
C8	C6	C5	H6	180.0	180.0
C12	C5	C6	C2	183.2	179.8
C6	C5	C12	H12	174.2	180.3
C6	C5	C2	F4	225.3	90.0
C6	C5	C2	F3	340.4	210.0
C6	C5	C2	F1	107.4	330.1
C11	C12	C5	H12	180.0	180.3
C6	C5	C12	C2	176.9	180.2
C12	C5	C6	H6	183.3	179.7
C12	C5	C2	F4	42.2	270.3
C12	C5	C2	F3	157.3	30.2
C12	C5	C2	F1	284.2	150.3
C6	C5	C2	C12	183.2	179.8
C2	C5	C6	H6	0.1	359.9
C2	C5	C12	H12	357.3	0.1
F4	C2	C5	F3	244.9	240.1
F4	C2	C5	F1	118.0	120.0
F3	C2	C5	F1	233.1	239.9
C5	C2	F4	F3	120.3	120.0
C5	C2	F4	F1	237.1	240.0
F3	C2	F4	F1	116.9	120.0
C5	C2	F3	F4	237.0	240.1
C5	C2	F3	F1	126.9	120.1
F4	C2	F3	F1	249.9	240.0
C5	C2	F1	F4	124.6	119.9
C5	C2	F1	F3	233.8	239.9
F4	C2	F1	F3	109.2	120.0
C16	C18	C25	C19	166.4	179.8
C25	C18	C19	C21	353.5	359.5
C25	C18	C19	H19	173.6	179.7
C18	C25	C23	C22	355.9	360.0
C23	C25	C18	H25	180.0	180.0
C18	C25	C23	H23	176.0	180.0
C16	C18	C19	C25	192.6	180.2
C19	C18	C25	C23	7.6	0.2
C19	C18	C25	H25	187.6	180.2
C22	C21	C19	C18	1.7	0.5
C18	C19	C21	N31	191.7	180.2
C21	C19	C18	H19	180.0	179.8
C23	C25	C18	C19	7.6	0.2
C18	C25	C23	H25	180.0	180.0
C25	C23	C22	C27	180.3	179.9
C25	C23	C22	C21	359.1	0.0
C22	C23	C25	H23	180.0	180.0
C22	C23	C25	H25	175.9	180.0
C25	C23	C22	H23	180.0	180.0
C27	C22	C23	C21	181.3	179.9
C23	C22	C27	H27	140.3	90.0
C23	C22	C27	H27A	260.3	210.1
C23	C22	C27	H27B	20.3	330.0
C23	C22	C21	C19	2.1	359.7
C23	C22	C21	N31	172.3	180.0
C23	C22	C27	C21	178.7	180.1
C27	C22	C23	H23	0.3	359.9
C27	C22	C21	C19	180.8	179.8
C27	C22	C21	N31	351.0	0.1
H27	C27	C22	H27A	240.0	240.0
H27	C27	C22	H27B	120.0	120.0
H27A	C27	C22	H27B	240.0	240.0
C18	C19	C21	C22	1.7	0.5
C23	C22	C21	C27	181.3	179.9
C21	C22	C23	H23	179.0	180.0
C21	C22	C27	H27	321.7	270.0
C21	C22	C27	H27A	81.6	30.0
C21	C22	C27	H27B	201.7	150.0
C19	C21	C22	N31	189.8	179.7
C22	C21	C19	H19	181.7	180.3
C22	C21	N31	C33	266.9	214.5
C22	C21	N31	HN31	86.9	34.5
C18	C19	C21	H19	180.0	180.2
C22	C21	C19	N31	170.0	180.3
C19	C21	N31	C33	77.1	34.8
C19	C21	N31	HN31	257.1	214.8
C22	C21	N31	C19	189.8	179.7
N31	C21	C19	H19	11.7	0.0
C21	N31	C33	N40	4.0	356.3
C21	N31	C33	N34	187.6	175.9
C33	N31	C21	HN31	180.0	180.0
C21	N31	C33	HN31	180.0	180.0
N40	C33	N31	N34	176.4	180.3
N31	C33	N40	C38	182.2	180.0
N31	C33	N34	C35	177.1	179.7
N31	C33	N40	N34	184.1	179.7
N40	C33	N31	HN31	184.0	176.2
N40	C33	N34	C35	0.4	359.4
C33	N40	C38	C36	2.7	359.9
C33	N40	C38	H38	182.7	180.0
N31	C33	N34	N40	176.6	180.3
N34	C33	N31	HN31	7.6	355.9
N34	C33	N40	C38	358.0	0.4
C36	C35	N34	C33	0.5	0.5
C33	N34	C35	C41	178.5	180.3
C38	N40	C33	N34	358.0	0.4
N40	C38	C36	C35	358.1	0.0
C36	C38	N40	H38	180.0	179.9
N40	C38	C36	H36	178.1	180.0
N40	C38	C36	H38	180.0	180.1
C38	C36	C35	N34	0.2	359.7
C38	C36	C35	C41	182.4	180.0
C35	C36	C38	H36	180.0	180.0
C33	N34	C35	C36	0.5	0.5
C35	C36	C38	H38	178.1	180.0
C38	C36	C35	H36	180.0	180.0
N34	C35	C36	C41	177.9	179.8
C36	C35	C41	C49	0.1	180.0
C36	C35	C41	C42	180.9	359.8
C36	C35	N34	C41	182.0	180.2
N34	C35	C36	H36	180.2	179.8
N34	C35	C41	C49	182.2	0.2
N34	C35	C41	C42	2.9	180.0
C36	C35	C41	N34	178.0	179.8
C41	C35	C36	H36	2.4	0.0
C49	C41	C35	C42	179.3	180.2
C35	C41	C49	C47	181.2	180.0
C35	C41	C49	H49	1.2	0.0
C35	C41	C42	N44	178.4	179.6
C35	C41	C42	H42	358.4	360.0
C35	C41	C49	C42	180.7	179.8
C49	C41	C42	N44	359.1	359.4
C49	C41	C42	H42	179.1	179.7
C41	C49	C47	C45	358.7	0.0
C47	C49	C41	H49	180.0	180.0
C41	C49	C47	H47	178.7	180.0
C35	C41	C42	C49	179.3	180.2
C42	C41	C49	C47	0.5	0.2
C42	C41	C49	H49	180.5	180.3
C45	N44	C42	C41	2.2	0.6
N44	C42	C41	H42	180.0	179.7
C47	C49	C41	C42	0.5	0.2
C41	C49	C47	H49	180.0	180.0
C49	C47	C45	N44	2.7	360.0
C45	C47	C49	H47	180.0	180.0
C49	C47	C45	H45	182.7	180.0
C45	C47	C49	H49	178.6	180.0
C49	C47	C45	H47	180.0	180.0
C47	C45	N44	C42	356.9	359.7
N44	C45	C47	H45	180.0	180.0
C41	C42	N44	C45	2.2	0.6
N44	C45	C47	H47	182.7	180.0
C47	C45	N44	H45	180.0	180.0
C45	N44	C42	H42	182.2	180.3
C41	C42	N44	H42	180.0	180.3
C42	N44	C45	H45	176.9	179.7
HN14	N14	C16	C18	4.2	356.3
C16	N14	HN14	C11	180.0	180.0
HN14	N14	C11	C9	25.2	215.2
HN14	N14	C11	C12	211.0	35.0
H9	C9	C11	C12	173.9	180.3
C11	C9	H9	C8	180.0	180.0
H9	C9	C8	N51	2.0	0.1
H9	C9	C8	C6	183.7	179.9
H56	C56	N51	C52	179.8	180.2
N51	C56	H56	C55	180.0	180.1
H56	C56	C55	C58	1.0	0.1
H56	C56	C55	N54	178.7	180.0
H58	C58	C55	N54	240.0	270.0
C55	C58	H58	H58A	120.0	120.0
C55	C58	H58	H58B	240.0	240.0
H58A	C58	H58	H58B	120.0	120.0
H58A	C58	C55	N54	0.0	30.0
C55	C58	H58A	H58	240.0	240.0
C55	C58	H58A	H58B	120.0	120.0
H58	C58	H58A	H58B	240.0	240.0
H58B	C58	C55	N54	120.0	150.0
C55	C58	H58B	H58	120.0	120.0
C55	C58	H58B	H58A	240.0	240.0
H58	C58	H58B	H58A	120.0	120.0
N51	C52	H52	N54	180.0	179.8
C8	C6	H6	C5	180.0	180.0
H6	C6	C5	C12	183.3	179.7
H6	C6	C5	C2	0.1	359.9
C11	C12	H12	C5	180.0	179.7
H12	C12	C5	C2	357.3	0.1
H25	C25	C18	C19	187.6	180.2
C18	C25	H25	C23	180.0	180.0
H25	C25	C23	C22	175.9	180.0
H25	C25	C23	H23	355.9	0.0
C25	C23	H23	C22	180.0	180.0
H23	C23	C25	H25	355.9	0.0
H23	C23	C22	C27	0.3	359.9
H23	C23	C22	C21	179.0	180.0
H27	C27	C22	C21	321.7	270.0
C22	C27	H27	H27A	120.0	120.0
C22	C27	H27	H27B	240.0	240.0
H27A	C27	H27	H27B	120.0	119.9
H27A	C27	C22	C21	81.6	30.0
C22	C27	H27A	H27	240.0	240.0
C22	C27	H27A	H27B	120.0	120.0
H27	C27	H27A	H27B	240.0	240.1
H27B	C27	C22	C21	201.7	150.0
C22	C27	H27B	H27	120.0	120.0
C22	C27	H27B	H27A	240.0	240.0
H27	C27	H27B	H27A	120.0	119.9
C18	C19	H19	C21	180.0	179.8
H19	C19	C21	N31	11.7	0.0
C21	N31	HN31	C33	180.0	180.0
HN31	N31	C33	N40	184.0	176.2
HN31	N31	C33	N34	7.6	355.9
N40	C38	H38	C36	180.0	179.9
H38	C38	C36	C35	178.1	180.0
H38	C38	C36	H36	358.1	359.9
C38	C36	H36	C35	180.0	180.0
H36	C36	C38	H38	358.1	359.9
H36	C36	C35	N34	180.2	179.8
H36	C36	C35	C41	2.4	0.0
H49	C49	C41	C42	180.5	180.3
C41	C49	H49	C47	180.0	180.0
H49	C49	C47	C45	178.6	180.0
H49	C49	C47	H47	358.7	360.0
C49	C47	H47	C45	180.0	180.0
H47	C47	C49	H49	358.7	360.0
H47	C47	C45	N44	182.7	180.0
H47	C47	C45	H45	2.7	0.0
C47	C45	H45	N44	180.0	180.0
H45	C45	C47	H47	2.7	0.0
H45	C45	N44	C42	176.9	179.7
C41	C42	H42	N44	180.0	179.7