PDB Chemical Component NI9

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NI9

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	P2	1.873	1.828
C1	O2	1.444	1.438
C1	C2	1.573	1.539
C1	P1	1.845	1.828
O1	P2	1.520	1.617
O1	HO1	0.950	0.981
O2	HO2	0.950	0.972
C2	N	1.502	1.479
C2	H21	1.100	1.097
C2	H22	1.099	1.097
O3	P2	1.519	1.616
O3	HO3	0.950	0.980
C3	N	1.368	1.332
C3	C7	1.380	1.387
C3	H3	1.080	1.083
P1	O6	1.502	1.500
P1	O7	1.515	1.618
P1	O4	1.541	1.616
P2	O5	1.445	1.500
O4	HO4	0.950	0.981
O7	HO7	0.950	0.980
N	C5	1.395	1.330
F	C7	1.344	1.339
C4	C7	1.398	1.392
C4	C6	1.396	1.392
C4	H4	1.080	1.085
C5	C6	1.402	1.389
C5	H5	1.080	1.083
C6	H6	1.080	1.084

Bond Angles for NI9

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O2	C1	P2	106.4	101.3
C2	C1	P2	104.1	112.3
P1	C1	P2	109.5	122.3
C1	P2	O1	108.0	103.6
C1	P2	O3	109.2	103.8
C1	P2	O5	109.8	115.0
O2	C1	C2	109.5	104.2
O2	C1	P1	112.2	101.3
C1	O2	HO2	109.5	107.4
C2	C1	P1	114.6	112.3
C1	C2	N	117.2	112.8
C1	C2	H21	107.0	111.2
C1	C2	H22	105.2	111.2
C1	P1	O6	109.2	115.0
C1	P1	O7	109.9	103.6
C1	P1	O4	106.6	103.8
P2	O1	HO1	109.5	118.9
O1	P2	O3	107.4	102.7
O1	P2	O5	109.4	114.7
N	C2	H21	107.0	107.7
N	C2	H22	105.2	107.7
C2	N	C3	114.7	118.1
C2	N	C5	122.0	118.1
H21	C2	H22	115.7	105.9
P2	O3	HO3	109.5	119.0
O3	P2	O5	113.0	115.5
N	C3	C7	117.9	119.3
N	C3	H3	121.0	117.9
C3	N	C5	123.3	123.8
C7	C3	H3	121.1	122.8
C3	C7	F	119.0	120.6
C3	C7	C4	120.9	118.8
O6	P1	O7	112.5	114.6
O4	P1	O6	109.3	115.5
O4	P1	O7	109.2	102.7
P1	O7	HO7	109.5	118.9
P1	O4	HO4	109.5	119.0
N	C5	C6	118.6	119.3
N	C5	H5	120.7	117.8
F	C7	C4	120.1	120.6
C6	C4	C7	120.6	119.9
C7	C4	H4	119.7	120.0
C6	C4	H4	119.7	120.1
C4	C6	C5	118.6	118.8
C4	C6	H6	120.7	120.6
C6	C5	H5	120.7	122.9
C5	C6	H6	120.7	120.6

Torsion Angles for NI9

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O2	C1	P2	C2	115.6	110.6
O2	C1	P2	P1	238.5	248.7
P2	C1	O2	HO2	167.7	63.3
C2	C1	P2	P1	122.9	138.1
P2	C1	C2	N	181.9	168.8
P2	C1	C2	H21	301.8	290.0
P2	C1	C2	H22	65.4	47.7
P2	C1	P1	O6	298.4	198.1
P2	C1	P1	O7	62.2	324.0
P2	C1	P1	O4	180.4	71.0
C1	P2	O1	HO1	209.2	177.6
O1	P2	C1	O3	243.6	107.0
O1	P2	C1	O5	119.2	234.1
C1	P2	O3	HO3	356.7	182.3
O3	P2	C1	O5	235.6	127.1
C2	C1	O2	P2	111.9	116.7
P1	C1	O2	P2	240.3	233.4
O2	C1	P2	O1	118.0	164.7
O2	C1	P2	O3	234.4	57.7
O2	C1	P2	O5	358.8	290.6
C2	C1	O2	P1	231.7	243.3
O2	C1	C2	N	68.4	60.0
O2	C1	C2	H21	188.4	181.2
O2	C1	C2	H22	312.0	298.9
O2	C1	P1	O6	56.3	309.4
O2	C1	P1	O7	180.1	75.3
O2	C1	P1	O4	298.4	182.3
O2	C1	C2	P2	246.5	251.2
P1	C1	C2	P2	119.5	142.4
C2	C1	P2	O1	2.4	54.1
C2	C1	P2	O3	118.8	307.1
C2	C1	P2	O5	243.2	180.0
O2	C1	C2	P1	127.0	108.8
C2	C1	O2	HO2	279.7	180.1
C2	C1	P1	O6	181.9	60.1
C2	C1	P1	O7	305.7	185.9
C2	C1	P1	O4	64.0	293.0
N	C2	C1	H21	240.0	238.8
N	C2	C1	H22	116.4	121.1
C1	C2	N	C3	139.1	90.1
C1	C2	N	C5	318.7	270.0
H21	C2	C1	H22	236.4	242.3
O2	C1	P1	P2	117.9	111.3
C2	C1	P1	P2	243.5	221.9
P1	C1	P2	O1	239.5	276.0
P1	C1	P2	O3	355.9	169.0
P1	C1	P2	O5	120.3	41.9
O2	C1	P1	C2	234.4	249.3
P1	C1	O2	HO2	48.0	296.8
P1	C1	C2	N	301.4	311.2
P1	C1	C2	H21	61.4	72.3
P1	C1	C2	H22	185.0	190.1
O6	P1	C1	O7	236.2	234.1
O4	P1	C1	O6	242.1	232.9
O4	P1	C1	O7	118.2	107.1
C1	P1	O7	HO7	311.0	182.5
C1	P1	O4	HO4	2.3	177.7
C1	P2	O1	O3	117.6	252.2
C1	P2	O1	O5	240.6	126.1
O1	P2	O3	HO3	113.6	74.7
O3	P2	O1	O5	123.0	233.9
HO1	O1	P2	O3	91.6	285.4
HO1	O1	P2	O5	328.7	51.4
HO2	O2	C1	P2	167.7	63.3
HO2	O2	C1	C2	279.7	180.1
HO2	O2	C1	P1	48.0	296.8
N	C2	C1	P2	181.9	168.8
N	C2	C1	P1	301.4	311.2
C1	C2	N	H21	120.0	123.1
C1	C2	N	H22	243.6	236.9
H21	C2	N	H22	123.6	113.8
C2	N	C3	C7	179.6	179.9
C2	N	C3	H3	359.6	359.9
C3	N	C2	C5	180.4	180.1
C2	N	C5	C6	180.2	180.1
C2	N	C5	H5	0.2	0.2
H21	C2	C1	P2	301.8	290.0
H21	C2	C1	P1	61.4	72.3
C1	C2	H21	N	233.7	235.9
C1	C2	H21	H22	116.8	120.9
N	C2	H21	H22	243.1	245.0
H21	C2	N	C3	19.1	326.9
H21	C2	N	C5	198.7	146.9
H22	C2	C1	P2	65.4	47.7
H22	C2	C1	P1	185.0	190.1
C1	C2	H22	N	124.3	124.1
C1	C2	H22	H21	242.2	239.1
N	C2	H22	H21	117.8	115.0
H22	C2	N	C3	255.5	213.2
H22	C2	N	C5	75.1	33.1
C1	P2	O3	O1	243.2	107.6
C1	P2	O3	O5	122.4	233.2
O3	P2	O1	HO1	91.6	285.4
O1	P2	O3	O5	239.3	125.5
HO3	O3	P2	O5	234.3	309.1
C3	N	C2	H21	19.1	326.9
C3	N	C2	H22	255.5	213.2
C2	N	C3	C5	179.6	179.9
C7	C3	N	H3	180.0	180.1
N	C3	C7	F	180.2	180.0
N	C3	C7	C4	0.2	360.0
C3	N	C5	C6	359.7	360.0
C3	N	C5	H5	179.8	180.1
N	C3	C7	H3	180.0	179.9
C7	C3	N	C5	0.1	0.0
F	C7	C3	C4	180.0	180.0
C6	C4	C7	C3	359.8	0.0
C3	C7	C4	H4	179.8	180.0
N	C3	H3	C7	180.0	180.1
H3	C3	N	C5	180.0	179.9
H3	C3	C7	F	0.2	0.0
H3	C3	C7	C4	180.2	180.0
O6	P1	C1	P2	298.4	198.1
C1	P1	O6	O7	122.3	119.9
C1	P1	O6	O4	243.8	239.1
O4	P1	O6	O7	238.5	240.9
O6	P1	O7	HO7	72.8	308.6
O6	P1	O4	HO4	244.5	50.9
O7	P1	C1	P2	62.2	324.0
C1	P1	O7	O6	238.1	233.9
C1	P1	O7	O4	116.6	107.9
O4	P1	O7	O6	121.5	126.0
O7	P1	O4	HO4	121.0	285.4
O4	P1	C1	P2	180.4	71.0
C1	P1	O4	O6	117.9	126.8
C1	P1	O4	O7	241.3	252.3
O6	P1	O4	O7	123.5	125.5
O4	P1	O7	HO7	194.3	74.6
C1	P2	O5	O1	118.3	240.1
C1	P2	O5	O3	237.9	120.9
O5	P2	O1	HO1	328.7	51.4
O1	P2	O5	O3	119.6	240.8
O5	P2	O3	HO3	234.3	309.1
HO4	O4	P1	O6	244.5	50.9
HO4	O4	P1	O7	121.0	285.4
C5	N	C2	H21	198.7	146.9
C5	N	C2	H22	75.1	33.1
C2	N	C5	C3	180.5	180.1
C5	N	C3	C7	0.1	0.0
C5	N	C3	H3	180.0	179.9
C4	C6	C5	N	0.2	0.0
C6	C5	N	H5	180.0	179.9
N	C5	C6	H6	180.2	180.0
F	C7	C3	H3	0.2	0.0
C3	C7	F	C4	180.0	180.0
C6	C4	C7	F	179.7	180.0
F	C7	C4	H4	359.7	360.0
C4	C7	C3	H3	180.2	180.0
C3	C7	C4	F	180.0	180.0
C6	C4	C7	H4	180.0	180.1
C7	C4	C6	C5	0.0	360.0
C7	C4	C6	H6	180.0	180.0
C3	C7	C4	C6	359.8	0.0
N	C5	C6	C4	0.2	0.0
F	C7	C4	C6	179.7	180.0
C7	C4	C6	H4	180.0	179.9
C4	C6	C5	H5	180.2	179.9
C5	C6	C4	H6	180.0	180.0
C6	C4	H4	C7	180.0	179.9
H4	C4	C6	C5	180.0	180.0
H4	C4	C6	H6	360.0	0.0
N	C5	C6	H5	180.0	180.1
C5	C6	C4	C7	0.0	360.0
C5	C6	C4	H4	180.0	180.0
C4	C6	C5	H6	180.0	180.0
N	C5	H5	C6	180.0	179.9
H5	C5	C6	H6	0.2	359.9
H6	C6	C4	C7	180.0	180.0
H6	C6	C4	H4	360.0	0.0
C4	C6	H6	C5	180.0	180.0
H6	C6	C5	H5	0.2	359.9