PDB Chemical Component NI5

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NI5

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
OAE SBD 1.490 1.421
CAF CAG 1.393 1.381
CAF CAU 1.383 1.386
SBD OAD 1.493 1.421
SBD CAU 1.802 1.761
SBD NBC 1.647 1.657
CAP CAN 1.494 1.533
CAP NBC 1.426 1.470
CAG CAW 1.397 1.387
CAN NBB 1.437 1.468
CAU CAH 1.392 1.378
NBC CAQ 1.428 1.471
CAK CAI 1.484 1.530
CAK OAT 1.397 1.429
CAW OAT 1.368 1.357
CAW CAX 1.383 1.401
NBB CAB 1.462 1.469
NBB CAO 1.428 1.469
CAI CAA 1.533 1.530
CAH CAX 1.392 1.397
CAQ CAO 1.492 1.532
CAX CAY 1.453 1.476
CAY NAS 1.395 1.364
CAY NAR 1.368 1.317
NAS CBA 1.369 1.350
NAR CAV 1.396 1.335
CBA OAC 1.374 1.221
CBA CAZ 1.420 1.408
CAV CAZ 1.452 1.363
CAV CAL 1.495 1.513
CAZ CAM 1.500 1.513
CAL CAJ 1.493 1.544
CAM CAJ 1.486 1.544
CAP H1 1.100 1.090
CAP H2 1.100 1.090
CAN H3 1.100 1.091
CAN H4 1.100 1.090
CAB H6 1.100 1.090
CAB H7 1.100 1.090
CAB H8 1.100 1.090
CAO H9 1.100 1.090
CAO H10 1.100 1.090
CAQ H11 1.100 1.090
CAQ H12 1.100 1.090
CAH H13 1.081 1.080
CAF H14 1.080 1.081
CAG H15 1.080 1.080
CAK H16 1.100 1.090
CAK H17 1.100 1.089
CAI H18 1.100 1.090
CAI H19 1.100 1.090
CAA H20 1.100 1.089
CAA H21 1.100 1.090
CAA H22 1.100 1.091
CAL H23 1.101 1.090
CAL H24 1.100 1.090
CAJ H25 1.100 1.091
CAJ H26 1.100 1.090
CAM H27 1.100 1.089
CAM H28 1.100 1.090
NAS H29 1.000 0.970

Bond Angles for NI5

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
OAE SBD CAU 108.7 106.4
CAF CAG CAW 120.4 120.1
CAG CAF H14 120.0 119.8
CAF CAG H15 119.8 120.0
OAD SBD CAU 111.7 106.4
SBD CAU CAH 120.7 119.9
CAN CAP NBC 112.4 108.5
CAP CAN NBB 113.6 109.4
CAN CAP H1 108.7 109.6
CAN CAP H2 108.7 109.6
CAP CAN H3 108.4 109.5
CAP CAN H4 108.4 109.4
CAP NBC CAQ 112.5 118.3
NBC CAP H1 108.7 109.6
NBC CAP H2 108.7 109.6
CAG CAW OAT 119.5 120.1
CAG CAW CAX 119.6 119.7
CAW CAG H15 119.8 120.0
CAN NBB CAB 115.6 111.0
CAN NBB CAO 113.2 111.3
NBB CAN H3 108.4 109.5
NBB CAN H4 108.4 109.5
CAU CAH CAX 120.7 119.9
CAU CAH H13 119.6 120.0
NBC CAQ H11 109.3 109.6
NBC CAQ H12 109.3 109.8
CAK CAI CAA 110.3 109.5
CAI CAK H16 109.3 109.4
CAI CAK H17 109.3 109.5
CAK CAI H18 109.3 109.4
CAK CAI H19 109.3 109.5
OAT CAW CAX 120.9 120.2
CAH CAX CAW 119.8 119.7
CAW CAX CAY 122.9 120.2
CAB NBB CAO 117.3 111.0
NBB CAB H6 109.5 109.5
NBB CAB H7 109.4 109.5
NBB CAB H8 109.5 109.4
NBB CAO H9 108.6 109.5
NBB CAO H10 108.6 109.5
CAA CAI H18 109.3 109.4
CAA CAI H19 109.3 109.5
CAI CAA H20 109.5 109.5
CAI CAA H21 109.5 109.4
CAI CAA H22 109.4 109.5
CAH CAX CAY 117.2 120.2
CAX CAH H13 119.7 120.1
CAQ CAO H9 108.6 109.5
CAQ CAO H10 108.6 109.5
CAX CAY NAS 117.6 119.4
CAX CAY NAR 121.0 119.4
NAR CAY NAS 121.3 121.2
CAY NAS CBA 121.6 119.5
CAY NAS H29 119.2 120.2
CAY NAR CAV 120.0 121.6
NAR CAV CAZ 119.0 119.7
NAR CAV CAL 134.2 130.3
CAL CAV CAZ 106.8 110.0
CAV CAZ CAM 109.7 110.2
CAV CAL CAJ 105.2 105.1
CAV CAL H23 110.5 110.3
CAV CAL H24 110.5 110.3
CAZ CAM H27 111.0 110.4
CAZ CAM H28 111.0 110.4
CAJ CAL H23 110.5 110.3
CAJ CAL H24 110.5 110.3
CAL CAJ H25 110.2 110.8
CAL CAJ H26 110.2 110.9
CAM CAJ H25 110.2 110.9
CAM CAJ H26 110.2 111.1
H1 CAP H2 109.5 109.8
H3 CAN H4 109.5 109.5
H6 CAB H7 109.5 109.5
H6 CAB H8 109.5 109.5
H7 CAB H8 109.5 109.5
H9 CAO H10 109.5 109.5
H11 CAQ H12 109.5 109.6
H16 CAK H17 109.4 109.5
H18 CAI H19 109.4 109.5
H20 CAA H21 109.4 109.5
H20 CAA H22 109.5 109.5
H21 CAA H22 109.5 109.4
H23 CAL H24 109.5 110.3
H25 CAJ H26 109.5 110.7
H27 CAM H28 109.5 110.3

Torsion Angles for NI5

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
OAD SBD OAE CAU 122.5 237.0
OAE SBD CAU CAH 158.9 203.5
CAF CAG CAW OAT 180.2 180.0
CAF CAG CAW CAX 1.1 0.2
CAW CAG CAF H15 180.0 180.1
CAF CAU CAH CAX 359.0 0.3
CAF CAU CAH H13 179.0 180.3
OAE SBD OAD CAU 239.2 123.0
OAD SBD CAU CAH 37.4 336.5
SBD CAU CAH CAX 178.2 180.0
SBD CAU CAH H13 358.2 360.0
SBD NBC CAP H1 84.2 111.5
SBD NBC CAP H2 325.1 350.8
SBD NBC CAQ H11 272.1 9.1
SBD NBC CAQ H12 31.9 248.6
CAN CAP NBC CAQ 53.5 51.2
NBC CAP CAN H1 239.6 240.3
NBC CAP CAN H2 120.4 119.7
CAP CAN NBB CAB 185.5 187.3
CAP CAN NBB CAO 46.1 63.1
NBB CAN CAP H3 239.4 240.0
NBB CAN CAP H4 120.6 120.0
H1 CAP CAN H2 240.9 239.4
H3 CAN CAP H4 241.2 240.0
NBC CAP CAN NBB 312.5 306.2
CAN CAP NBC H1 120.4 119.7
CAN CAP NBC H2 239.6 240.3
NBC CAP CAN H3 73.1 66.2
NBC CAP CAN H4 191.9 186.2
CAP NBC CAQ H11 63.3 189.1
CAP NBC CAQ H12 183.1 68.6
H1 CAP NBC H2 119.1 120.6
CAW CAG CAF H14 180.3 180.0
CAF CAG CAW H15 180.0 179.9
OAT CAW CAG CAX 179.1 179.8
CAH CAX CAW CAG 357.7 359.8
CAG CAW CAX CAY 181.6 179.8
NBB CAN CAP NBC 312.5 306.2
NBB CAN CAP H1 73.0 65.9
NBB CAN CAP H2 192.1 186.5
CAP CAN NBB H3 120.6 120.0
CAP CAN NBB H4 239.4 240.1
CAB NBB CAN CAO 139.4 124.2
CAN NBB CAB H6 180.0 60.0
CAN NBB CAB H7 300.0 180.0
CAN NBB CAB H8 60.0 300.0
CAN NBB CAO H9 70.2 56.9
CAN NBB CAO H10 189.2 176.9
H3 CAN NBB H4 118.8 120.0
CAU CAH CAX CAW 2.3 360.0
CAU CAH CAX CAY 178.6 180.0
CAX CAH CAU H13 180.0 180.0
CAQ NBC CAP H1 293.1 291.5
CAQ NBC CAP H2 173.9 170.9
NBC CAQ CAO H9 294.7 293.9
NBC CAQ CAO H10 175.7 173.8
H11 CAQ NBC H12 240.1 120.5
CAA CAI CAK H18 239.9 240.1
CAA CAI CAK H19 120.1 120.0
CAK CAI CAA H20 180.0 180.0
CAK CAI CAA H21 300.0 300.0
CAK CAI CAA H22 60.0 59.9
H16 CAK CAI H17 240.2 120.0
H18 CAI CAK H19 240.3 240.0
CAK OAT CAW CAX 176.3 179.8
CAG CAW OAT CAX 180.9 180.2
OAT CAW CAG H15 0.2 0.1
CAH CAX CAW OAT 178.6 180.0
OAT CAW CAX CAY 2.5 0.0
CAG CAW CAX OAT 179.1 179.8
CAX CAW CAG H15 181.1 180.3
CAH CAX CAW CAY 176.1 180.0
CAW CAX CAH H13 182.3 180.0
CAW CAX CAY NAS 38.7 180.0
CAW CAX CAY NAR 215.9 0.2
CAN NBB CAB CAO 222.3 235.6
CAB NBB CAN H3 64.9 67.3
CAB NBB CAN H4 306.1 307.2
CAB NBB CAO H9 291.5 292.7
CAB NBB CAO H10 50.5 52.7
H6 CAB NBB H7 240.0 240.0
H6 CAB NBB H8 120.0 120.0
H7 CAB NBB H8 240.0 240.0
CAN NBB CAO CAB 138.7 124.2
CAO NBB CAN H3 285.5 303.1
CAO NBB CAN H4 166.8 183.0
CAO NBB CAB H6 317.7 184.3
CAO NBB CAB H7 77.7 304.4
CAO NBB CAB H8 197.7 64.3
CAQ CAO NBB H9 239.5 240.0
CAQ CAO NBB H10 120.5 120.0
H9 CAO NBB H10 241.0 240.0
CAA CAI CAK H16 73.7 60.1
CAA CAI CAK H17 193.5 300.1
CAK CAI CAA H18 120.1 119.9
CAK CAI CAA H19 239.9 240.0
H18 CAI CAA H19 119.7 120.0
H20 CAA CAI H21 240.0 240.0
H20 CAA CAI H22 120.0 120.0
H21 CAA CAI H22 240.0 240.1
CAG CAW CAX CAH 357.7 359.8
CAU CAH CAX H13 180.0 180.0
OAT CAW CAX CAH 178.6 180.0
CAW CAX CAH CAY 183.7 180.0
CAH CAX CAY NAS 222.5 0.1
CAH CAX CAY NAR 39.7 180.2
CAP NBC CAQ CAO 303.2 308.8
NBB CAO CAQ H9 120.5 119.9
NBB CAO CAQ H10 239.5 240.0
H9 CAO CAQ H10 119.0 120.1
CAH CAX CAY CAW 183.8 180.0
CAY CAX CAH H13 358.6 360.0
NAR CAY CAX NAS 177.2 180.2
CAX CAY NAS CBA 178.2 179.8
CAX CAY NAS H29 358.2 359.9
CAX CAY NAR CAV 182.4 180.0
CAX CAY NAS NAR 177.2 180.2
NAS CAY NAR CAV 359.5 0.2
CAX CAY NAR NAS 182.9 179.8
NAR CAY NAS CBA 1.1 359.6
NAR CAY NAS H29 181.1 179.7
CAY NAR CAV CAZ 0.3 0.0
CAY NAR CAV CAL 180.7 180.0
CAY NAS CBA H29 180.0 180.1
CAV NAR CAY NAS 359.5 0.2
CAL CAV NAR CAZ 180.5 180.0
NAR CAV CAZ CAM 180.3 180.0
NAR CAV CAL CAJ 196.8 163.0
NAR CAV CAL H23 316.2 281.9
NAR CAV CAL H24 77.5 44.1
CAY NAS CBA OAC 179.6 180.2
CAY NAS CBA CAZ 358.8 0.5
CBA CAZ CAM H27 282.8 78.1
CBA CAZ CAM H28 44.7 315.9
NAR CAV CAZ CAL 180.3 180.0
CAZ CAV CAL CAJ 17.3 342.9
CAZ CAV CAL H23 136.6 101.9
CAZ CAV CAL H24 257.9 224.0
CAV CAZ CAM H27 101.8 258.1
CAV CAZ CAM H28 223.7 135.9
NAR CAV CAL CAZ 179.6 180.0
CAL CAV CAZ CAM 0.0 0.0
CAJ CAL CAV H23 240.7 241.1
CAJ CAL CAV H24 119.3 118.9
CAV CAL CAJ H25 91.2 144.2
CAV CAL CAJ H26 212.1 267.6
H23 CAL CAV H24 238.6 237.8
CAZ CAM CAJ H25 268.2 215.9
CAZ CAM CAJ H26 147.3 92.3
H27 CAM CAZ H28 238.1 122.2
CAJ CAL CAV CAZ 17.3 342.9
CAV CAL CAJ H23 119.3 118.9
CAV CAL CAJ H24 240.7 241.1
CAM CAJ CAL H25 240.4 241.8
CAM CAJ CAL H26 119.6 118.4
H23 CAL CAJ H24 121.4 122.2
H25 CAJ CAL H26 239.1 236.6
CAV CAZ CAM CAJ 342.8 17.0
CAM CAJ CAL H23 212.3 267.0
CAM CAJ CAL H24 90.9 144.9
CAL CAJ CAM H25 119.6 118.1
CAL CAJ CAM H26 240.5 241.7
H25 CAJ CAM H26 120.9 123.6
CAN CAP H1 NBC 237.3 241.0
H1 CAP CAN NBB 73.0 65.9
CAN CAP H1 H2 118.6 120.5
H1 CAP CAN H3 193.6 185.9
H1 CAP CAN H4 312.4 305.9
H1 CAP NBC CAQ 293.1 291.5
NBC CAP H1 H2 241.3 239.5
CAN CAP H2 NBC 122.7 119.0
H2 CAP CAN NBB 192.1 186.5
CAN CAP H2 H1 241.4 239.5
H2 CAP CAN H3 312.7 306.5
H2 CAP CAN H4 71.5 66.5
H2 CAP NBC CAQ 173.9 170.9
NBC CAP H2 H1 118.7 120.5
H3 CAN CAP NBC 73.1 66.2
CAP CAN H3 NBB 236.2 240.1
H3 CAN CAP H1 193.6 185.9
H3 CAN CAP H2 312.7 306.5
CAP CAN H3 H4 118.1 120.0
H3 CAN NBB CAB 64.9 67.3
H3 CAN NBB CAO 285.5 303.1
NBB CAN H3 H4 241.9 239.9
H4 CAN CAP NBC 191.9 186.2
CAP CAN H4 NBB 123.8 119.9
H4 CAN CAP H1 312.4 305.9
H4 CAN CAP H2 71.5 66.5
CAP CAN H4 H3 241.9 239.9
H4 CAN NBB CAB 306.1 307.2
H4 CAN NBB CAO 166.8 183.0
NBB CAN H4 H3 118.1 120.1
H6 CAB NBB CAO 317.7 184.3
NBB CAB H6 H7 120.0 120.0
NBB CAB H6 H8 240.0 240.1
H7 CAB H6 H8 120.0 120.1
H7 CAB NBB CAO 77.7 304.4
NBB CAB H7 H6 240.0 240.0
NBB CAB H7 H8 120.0 119.9
H6 CAB H7 H8 240.0 239.9
H8 CAB NBB CAO 197.7 64.3
NBB CAB H8 H6 120.0 120.0
NBB CAB H8 H7 240.0 240.1
H6 CAB H8 H7 120.0 120.1
NBB CAO H9 H10 118.4 120.1
CAQ CAO H9 H10 241.5 239.9
NBB CAO H10 H9 241.5 240.0
CAQ CAO H10 H9 118.4 120.1
NBC CAQ H11 H12 119.7 239.4
H11 CAQ CAO H9 174.6 53.6
H11 CAQ CAO H10 55.6 293.5
NBC CAQ H12 H11 240.3 120.5
H12 CAQ CAO H9 54.7 173.9
H12 CAQ CAO H10 295.8 53.9
CAU CAH H13 CAX 180.0 180.0
H13 CAH CAX CAW 182.3 180.0
H13 CAH CAX CAY 358.6 360.0
H14 CAF CAG CAW 180.3 180.0
H14 CAF CAG H15 0.3 359.9
CAF CAG H15 CAW 180.0 180.1
H15 CAG CAF H14 0.3 359.9
H15 CAG CAW OAT 0.2 0.1
H15 CAG CAW CAX 181.1 180.3
H16 CAK CAI CAA 73.7 60.1
CAI CAK H16 H17 119.7 240.0
H16 CAK CAI H18 193.9 180.0
H16 CAK CAI H19 313.6 300.0
H17 CAK CAI CAA 193.5 300.1
CAI CAK H17 H16 240.3 120.0
H17 CAK CAI H18 313.6 60.0
H17 CAK CAI H19 73.4 180.0
CAK CAI H18 CAA 239.3 240.0
H18 CAI CAK H16 193.9 180.0
H18 CAI CAK H17 313.6 60.0
CAK CAI H18 H19 119.6 120.0
CAA CAI H18 H19 240.4 240.0
H18 CAI CAA H20 59.8 60.0
H18 CAI CAA H21 179.8 180.1
H18 CAI CAA H22 299.9 300.0
CAK CAI H19 CAA 120.7 120.0
H19 CAI CAK H16 313.6 300.0
H19 CAI CAK H17 73.4 180.0
CAK CAI H19 H18 240.4 240.0
CAA CAI H19 H18 119.6 120.0
H19 CAI CAA H20 300.1 300.0
H19 CAI CAA H21 60.1 60.0
H19 CAI CAA H22 180.1 180.0
H20 CAA CAI H18 59.8 60.0
H20 CAA CAI H19 300.1 300.0
CAI CAA H20 H21 120.0 120.0
CAI CAA H20 H22 240.0 240.0
H21 CAA H20 H22 120.0 120.0
H21 CAA CAI H18 179.8 180.1
H21 CAA CAI H19 60.1 60.0
CAI CAA H21 H20 240.0 240.0
CAI CAA H21 H22 120.0 120.0
H20 CAA H21 H22 240.0 240.0
H22 CAA CAI H18 299.9 300.0
H22 CAA CAI H19 180.1 180.0
CAI CAA H22 H20 120.0 120.0
CAI CAA H22 H21 240.0 240.1
H20 CAA H22 H21 120.0 120.0
H23 CAL CAV CAZ 136.6 101.9
CAV CAL H23 CAJ 244.0 244.3
CAV CAL H23 H24 122.0 122.1
CAJ CAL H23 H24 238.0 237.9
H23 CAL CAJ H25 331.9 25.2
H23 CAL CAJ H26 92.7 148.6
H24 CAL CAV CAZ 257.9 224.0
CAV CAL H24 CAJ 116.0 115.7
CAV CAL H24 H23 238.0 237.8
CAJ CAL H24 H23 122.0 122.2
H24 CAL CAJ H25 210.5 263.1
H24 CAL CAJ H26 331.4 26.5
H25 CAJ CAL H23 331.9 25.2
H25 CAJ CAL H24 210.5 263.1
CAL CAJ H25 H26 121.3 123.5
CAM CAJ H25 H26 238.7 236.2
H26 CAJ CAL H23 92.7 148.6
H26 CAJ CAL H24 331.4 26.5
CAL CAJ H26 H25 238.7 236.5
CAM CAJ H26 H25 121.3 123.7
CAZ CAM H27 H28 122.8 237.7
H27 CAM CAJ H25 149.2 334.8
H27 CAM CAJ H26 28.3 211.2
CAZ CAM H28 H27 237.2 122.2
H28 CAM CAJ H25 27.3 97.0
H28 CAM CAJ H26 266.4 333.3
CAY NAS H29 CBA 180.0 179.9