PDB Chemical Component NGZ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NGZ

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.578	1.531
C1	O5	1.463	1.430
C1	O1	1.115	1.428
C1	H1	1.100	1.090
C2	C3	1.555	1.532
C2	N2	1.489	1.465
C2	H2	1.100	1.090
C3	C4	1.560	1.532
C3	O3	1.421	1.429
C3	H3	1.100	1.090
C4	C5	1.579	1.531
C4	O4	1.462	1.429
C4	H4	1.100	1.090
C5	C6	1.549	1.529
C5	O5	1.463	1.429
C5	H5	1.100	1.091
C6	O6	1.430	1.429
C6	H61	1.101	1.090
C6	H62	1.100	1.090
C7	C8	1.521	1.507
C7	N2	1.459	1.348
C7	O7	1.407	1.213
C8	H81	1.100	1.090
C8	H82	1.100	1.090
C8	H83	1.100	1.090
N2	HN2	1.000	0.970
O3	HO3	0.950	0.967
O4	HO4	0.950	0.967
O6	HO6	0.950	0.967
O1	HO1	0.950	0.967

Bond Angles for NGZ

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O5	112.5	109.4
C2	C1	O1	110.5	109.5
C2	C1	H1	105.2	109.5
C1	C2	C3	110.9	109.1
C1	C2	N2	115.2	109.5
C1	C2	H2	105.7	109.5
O5	C1	O1	110.5	109.5
O5	C1	H1	106.4	109.4
C1	O5	C5	119.8	114.1
O1	C1	H1	111.7	109.5
C1	O1	HO1	109.5	114.0
C3	C2	N2	111.9	109.5
C3	C2	H2	105.9	109.5
C2	C3	C4	111.2	109.1
C2	C3	O3	110.8	109.5
C2	C3	H3	107.8	109.5
N2	C2	H2	106.6	109.6
C2	N2	C7	130.1	119.9
C2	N2	HN2	115.0	120.1
C4	C3	O3	109.5	109.5
C4	C3	H3	107.8	109.6
C3	C4	C5	110.4	109.2
C3	C4	O4	106.6	109.5
C3	C4	H4	109.0	109.5
O3	C3	H3	109.6	109.6
C3	O3	HO3	109.5	114.0
C5	C4	O4	111.8	109.5
C5	C4	H4	108.7	109.5
C4	C5	C6	114.8	109.5
C4	C5	O5	113.1	109.4
C4	C5	H5	106.3	109.5
O4	C4	H4	110.3	109.6
C4	O4	HO4	109.5	113.9
C6	C5	O5	107.9	109.5
C6	C5	H5	106.6	109.5
C5	C6	O6	112.4	109.5
C5	C6	H61	108.7	109.5
C5	C6	H62	108.7	109.5
O5	C5	H5	107.7	109.4
O6	C6	H61	108.7	109.4
O6	C6	H62	108.7	109.5
C6	O6	HO6	109.5	114.0
H61	C6	H62	109.5	109.4
C8	C7	N2	115.2	120.0
C8	C7	O7	108.0	120.0
C7	C8	H81	109.5	109.5
C7	C8	H82	109.5	109.5
C7	C8	H83	109.5	109.5
N2	C7	O7	103.5	120.0
C7	N2	HN2	114.9	120.0
H81	C8	H82	109.5	109.5
H81	C8	H83	109.4	109.4
H82	C8	H83	109.5	109.4

Torsion Angles for NGZ

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O5	C1	C2	O1	236.0	240.0
O5	C1	C2	H1	115.4	119.9
C2	C1	O5	C5	314.8	61.2
O1	C1	C2	H1	239.3	239.9
C2	C1	O1	HO1	180.0	180.0
C3	C2	C1	N2	128.3	119.9
C3	C2	C1	H2	245.7	240.1
C1	C2	C3	C4	55.6	57.0
C1	C2	C3	O3	177.7	176.9
C1	C2	C3	H3	297.6	297.1
N2	C2	C1	H2	117.4	120.2
C1	C2	N2	C7	241.1	275.0
C1	C2	N2	HN2	61.1	95.0
C2	C1	O5	O1	124.0	120.0
C2	C1	O5	H1	245.4	240.1
O5	C1	C2	C3	352.4	302.4
O5	C1	C2	N2	224.1	182.5
O5	C1	C2	H2	106.7	62.3
O1	C1	O5	H1	121.4	120.1
O5	C1	O1	HO1	305.2	300.0
C4	C5	O5	C1	46.6	298.9
C6	C5	O5	C1	278.4	178.8
C1	O5	C5	H5	163.7	58.9
C2	C1	O1	O5	234.9	240.0
C2	C1	O1	H1	116.7	120.0
O1	C1	C2	C3	116.4	62.4
O1	C1	C2	N2	348.1	302.5
O1	C1	C2	H2	230.7	182.3
O5	C1	O1	H1	241.8	240.0
O1	C1	O5	C5	190.8	301.2
C2	C1	H1	O5	119.5	119.9
C2	C1	H1	O1	240.1	239.9
H1	C1	C2	C3	237.1	182.5
H1	C1	C2	N2	108.7	62.6
H1	C1	C2	H2	351.4	302.4
O5	C1	H1	O1	120.6	120.0
H1	C1	O5	C5	69.4	181.1
H1	C1	O1	HO1	63.3	60.0
C3	C2	C1	O5	352.4	302.4
C3	C2	C1	O1	116.4	62.4
C3	C2	C1	H1	237.1	182.5
C1	C2	C3	N2	229.9	240.1
C1	C2	C3	H2	114.2	119.9
N2	C2	C3	H2	244.3	239.8
C3	C2	N2	C7	113.2	155.3
C3	C2	N2	HN2	293.2	335.3
C4	C3	C2	O3	238.0	240.1
C4	C3	C2	H3	118.0	119.9
C2	C3	C4	C5	305.8	303.0
C2	C3	C4	O4	184.2	183.1
C2	C3	C4	H4	65.2	62.9
O3	C3	C2	H3	240.0	239.8
C2	C3	O3	HO3	180.0	180.0
N2	C2	C1	O5	224.1	182.5
N2	C2	C1	O1	348.1	302.5
N2	C2	C1	H1	108.7	62.6
C1	C2	N2	C3	127.9	119.6
C1	C2	N2	H2	243.2	239.8
C3	C2	N2	H2	115.3	120.2
N2	C2	C3	C4	185.7	176.9
N2	C2	C3	O3	307.8	296.8
N2	C2	C3	H3	67.7	57.0
C8	C7	N2	C2	24.2	180.0
C2	N2	C7	O7	141.9	360.0
C7	N2	C2	HN2	180.0	180.0
H2	C2	C1	O5	106.7	62.3
H2	C2	C1	O1	230.7	182.3
H2	C2	C1	H1	351.4	302.4
C1	C2	H2	C3	242.3	240.3
C1	C2	H2	N2	123.0	120.2
C3	C2	H2	N2	240.7	239.8
H2	C2	C3	C4	301.5	297.1
H2	C2	C3	O3	63.5	57.0
H2	C2	C3	H3	183.5	177.2
H2	C2	N2	C7	357.9	35.2
H2	C2	N2	HN2	177.9	215.2
C4	C3	C2	N2	185.7	176.9
C4	C3	C2	H2	301.5	297.1
C2	C3	C4	O3	122.8	119.8
C2	C3	C4	H3	242.0	240.1
O3	C3	C4	H3	119.2	120.3
C4	C3	O3	HO3	303.0	299.6
C5	C4	C3	O4	121.7	119.9
C5	C4	C3	H4	240.7	240.1
C3	C4	C5	C6	129.6	177.6
C3	C4	C5	O5	5.2	57.6
C3	C4	C5	H5	247.3	297.6
O4	C4	C3	H4	119.0	120.2
C3	C4	O4	HO4	180.0	180.0
O3	C3	C2	N2	307.8	296.8
O3	C3	C2	H2	63.5	57.0
C2	C3	O3	C4	236.9	240.4
C2	C3	O3	H3	118.9	120.2
C4	C3	O3	H3	241.9	239.7
O3	C3	C4	C5	183.0	183.2
O3	C3	C4	O4	61.4	63.3
O3	C3	C4	H4	302.4	303.0
H3	C3	C2	N2	67.7	57.0
H3	C3	C2	H2	183.5	177.2
C2	C3	H3	C4	120.2	119.6
C2	C3	H3	O3	239.3	239.8
C4	C3	H3	O3	119.1	120.2
H3	C3	C4	C5	63.8	62.9
H3	C3	C4	O4	302.2	303.0
H3	C3	C4	H4	183.2	182.8
H3	C3	O3	HO3	61.1	59.8
C1	O5	C5	C4	46.6	298.9
C5	C4	C3	O3	183.0	183.2
C5	C4	C3	H3	63.8	62.9
C3	C4	C5	O4	241.5	240.1
C3	C4	C5	H4	119.5	119.9
O4	C4	C5	H4	238.0	239.8
C5	C4	O4	HO4	59.3	60.3
C6	C5	C4	O5	124.4	120.0
C6	C5	C4	H5	242.4	240.0
C4	C5	C6	O6	184.1	175.0
C4	C5	C6	H61	304.5	295.0
C4	C5	C6	H62	63.7	55.0
O5	C5	C4	H5	118.0	120.0
O4	C4	C3	O3	61.4	63.3
O4	C4	C3	H3	302.2	303.0
C3	C4	O4	C5	120.7	119.7
C3	C4	O4	H4	241.8	239.8
C5	C4	O4	H4	121.1	120.1
O4	C4	C5	C6	248.1	297.5
O4	C4	C5	O5	123.7	177.5
O4	C4	C5	H5	5.8	57.5
H4	C4	C3	O3	302.4	303.0
H4	C4	C3	H3	183.2	182.8
C3	C4	H4	C5	239.6	240.3
C3	C4	H4	O4	116.7	120.2
C5	C4	H4	O4	237.1	239.8
H4	C4	C5	C6	10.1	57.7
H4	C4	C5	O5	245.7	297.7
H4	C4	C5	H5	127.8	177.7
H4	C4	O4	HO4	298.2	300.2
C1	O5	C5	C6	278.4	178.8
C6	C5	C4	O4	248.1	297.5
C6	C5	C4	H4	10.1	57.7
C4	C5	C6	O5	232.9	240.0
C4	C5	C6	H5	117.5	120.1
O5	C5	C6	H5	244.6	240.0
O6	C6	C5	H61	239.6	240.0
O6	C6	C5	H62	120.4	120.0
C5	C6	O6	HO6	180.0	180.1
H61	C6	C5	H62	240.9	240.0
C5	O5	C1	O1	190.8	301.2
C5	O5	C1	H1	69.4	181.1
O5	C5	C4	O4	123.7	177.5
O5	C5	C4	H4	245.7	297.7
C4	C5	O5	C6	128.1	120.0
C4	C5	O5	H5	242.8	240.0
C6	C5	O5	H5	114.7	120.0
O5	C5	C6	O6	311.2	295.0
O5	C5	C6	H61	71.6	55.0
O5	C5	C6	H62	190.7	175.0
H5	C5	C4	O4	5.8	57.5
H5	C5	C4	H4	127.8	177.7
C4	C5	H5	C6	237.0	239.9
C4	C5	H5	O5	121.5	120.0
C6	C5	H5	O5	244.4	240.0
H5	C5	C6	O6	66.6	55.0
H5	C5	C6	H61	187.0	174.9
H5	C5	C6	H62	306.2	294.9
O6	C6	C5	O5	311.2	295.0
O6	C6	C5	H5	66.6	55.0
C5	C6	O6	H61	120.4	120.0
C5	C6	O6	H62	239.6	240.0
H61	C6	O6	H62	119.1	119.9
H61	C6	C5	O5	71.6	55.0
H61	C6	C5	H5	187.0	174.9
C5	C6	H61	O6	237.3	240.0
C5	C6	H61	H62	118.7	120.0
O6	C6	H61	H62	241.3	240.0
H61	C6	O6	HO6	59.6	60.0
H62	C6	C5	O5	190.7	175.0
H62	C6	C5	H5	306.2	294.9
C5	C6	H62	O6	122.7	120.0
C5	C6	H62	H61	241.4	240.0
O6	C6	H62	H61	118.7	119.9
H62	C6	O6	HO6	300.4	300.1
C2	N2	C7	C8	24.2	180.0
N2	C7	C8	O7	115.1	180.0
C8	C7	N2	HN2	204.2	0.0
H81	C8	C7	H82	240.0	239.9
H81	C8	C7	H83	120.0	120.0
H82	C8	C7	H83	240.0	240.0
C7	N2	C2	H2	357.9	35.2
C2	N2	C7	HN2	180.0	180.0
C8	C7	N2	O7	242.3	180.0
N2	C7	C8	H81	115.1	89.9
N2	C7	C8	H82	235.1	210.0
N2	C7	C8	H83	355.1	330.0
C8	C7	O7	N2	122.6	180.0
O7	C7	C8	H81	360.0	269.9
O7	C7	C8	H82	120.0	30.0
O7	C7	C8	H83	240.0	150.0
O7	C7	N2	HN2	321.9	180.0
H81	C8	C7	N2	115.1	89.9
H81	C8	C7	O7	360.0	269.9
C7	C8	H81	H82	120.0	120.0
C7	C8	H81	H83	240.0	240.0
H82	C8	H81	H83	120.0	120.0
H82	C8	C7	N2	235.1	210.0
H82	C8	C7	O7	120.0	30.0
C7	C8	H82	H81	240.0	240.0
C7	C8	H82	H83	120.0	120.0
H81	C8	H82	H83	240.0	240.1
H83	C8	C7	N2	355.1	330.0
H83	C8	C7	O7	240.0	150.0
C7	C8	H83	H81	120.0	120.0
C7	C8	H83	H82	240.0	240.0
H81	C8	H83	H82	120.0	120.0
HN2	N2	C2	H2	177.9	215.2
C2	N2	HN2	C7	180.0	180.0
HN2	N2	C7	O7	321.9	180.0
HO3	O3	C3	H3	61.1	59.8
HO4	O4	C4	H4	298.2	300.2
HO6	O6	C6	H61	59.6	60.0
HO6	O6	C6	H62	300.4	300.1
HO1	O1	C1	H1	63.3	60.0