PDB Chemical Component NGT

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NGT

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.558	1.523
C1	S1	1.860	1.824
C1	O5	1.397	1.372
C1	HC1	1.115	1.090
C2	C3	1.567	1.520
C2	N2	1.457	1.463
C2	HC2	1.114	1.089
C3	C4	1.539	1.524
C3	O3	1.420	1.429
C3	HC3	1.116	1.090
C4	C5	1.544	1.534
C4	O4	1.417	1.428
C4	HC4	1.114	1.091
C5	C6	1.527	1.530
C5	O5	1.479	1.418
C5	HC5	1.116	1.090
C6	O6	1.428	1.428
C6	HC61	1.115	1.091
C6	HC62	1.114	1.089
C7	C8	1.511	1.507
C7	N2	1.262	1.291
C7	S1	1.766	1.787
C8	HC81	1.116	1.089
C8	HC82	1.115	1.090
C8	HC83	1.115	1.090
O3	HO3	0.951	0.965
O4	HO4	0.950	0.967
O6	HO6	0.951	0.967

Bond Angles for NGT

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	S1	102.2	100.1
C2	C1	O5	117.9	121.4
C2	C1	HC1	110.1	105.9
C1	C2	C3	111.6	114.0
C1	C2	N2	107.7	110.9
C1	C2	HC2	109.2	107.9
S1	C1	O5	112.6	113.4
S1	C1	HC1	115.6	106.6
C1	S1	C7	88.6	97.7
O5	C1	HC1	99.0	108.3
C1	O5	C5	116.8	112.2
C3	C2	N2	109.3	108.3
C3	C2	HC2	107.6	107.8
C2	C3	C4	112.8	111.9
C2	C3	O3	109.7	109.1
C2	C3	HC3	107.3	109.0
N2	C2	HC2	111.5	107.7
C2	N2	C7	114.1	121.5
C4	C3	O3	110.4	108.9
C4	C3	HC3	106.6	108.9
C3	C4	C5	110.2	107.6
C3	C4	O4	109.1	109.9
C3	C4	HC4	109.5	109.8
O3	C3	HC3	109.9	109.0
C3	O3	HO3	109.7	106.9
C5	C4	O4	110.2	109.9
C5	C4	HC4	108.3	109.8
C4	C5	C6	113.9	109.8
C4	C5	O5	110.1	107.8
C4	C5	HC5	105.4	109.7
O4	C4	HC4	109.5	109.8
C4	O4	HO4	109.1	106.8
C6	C5	O5	107.6	109.8
C6	C5	HC5	108.0	109.8
C5	C6	O6	110.8	109.5
C5	C6	HC61	111.7	109.4
C5	C6	HC62	111.7	109.5
O5	C5	HC5	112.0	109.8
O6	C6	HC61	111.7	109.4
O6	C6	HC62	111.7	109.5
C6	O6	HO6	110.8	106.8
HC61	C6	HC62	98.7	109.5
C8	C7	N2	126.1	127.3
C8	C7	S1	117.1	127.3
C7	C8	HC81	126.1	109.5
C7	C8	HC82	106.4	109.5
C7	C8	HC83	106.4	109.4
N2	C7	S1	116.8	105.3
HC81	C8	HC82	106.4	109.5
HC81	C8	HC83	106.3	109.5
HC82	C8	HC83	103.1	109.5

Torsion Angles for NGT

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
S1	C1	C2	O5	235.9	234.5
S1	C1	C2	HC1	123.4	110.6
C2	C1	S1	C7	333.5	341.4
O5	C1	C2	HC1	247.4	236.1
C2	C1	O5	C5	315.0	319.1
C3	C2	C1	N2	240.0	237.4
C3	C2	C1	HC2	118.8	119.7
C1	C2	C3	C4	318.5	330.5
C1	C2	C3	O3	194.9	209.9
C1	C2	C3	HC3	75.6	91.0
N2	C2	C1	HC2	238.8	242.3
C1	C2	N2	C7	335.0	345.0
C2	C1	S1	O5	127.5	130.8
C2	C1	S1	HC1	240.4	249.9
S1	C1	C2	C3	273.0	258.0
S1	C1	C2	N2	33.0	20.5
S1	C1	C2	HC2	154.2	138.2
O5	C1	S1	HC1	112.9	119.1
S1	C1	O5	C5	73.6	78.3
C8	C7	S1	C1	196.6	192.4
N2	C7	S1	C1	15.8	12.1
C2	C1	O5	S1	241.4	240.8
C2	C1	O5	HC1	118.6	122.8
O5	C1	C2	C3	37.1	23.5
O5	C1	C2	N2	157.0	146.0
O5	C1	C2	HC2	278.3	263.8
S1	C1	O5	HC1	237.3	241.9
O5	C1	S1	C7	206.0	210.5
C4	C5	O5	C1	54.7	63.1
C6	C5	O5	C1	179.3	182.8
C1	O5	C5	HC5	297.8	303.7
C2	C1	HC1	S1	115.1	105.9
C2	C1	HC1	O5	235.7	228.3
HC1	C1	C2	C3	149.6	147.4
HC1	C1	C2	N2	269.6	269.9
HC1	C1	C2	HC2	30.9	27.6
S1	C1	HC1	O5	120.6	122.3
HC1	C1	S1	C7	93.1	91.5
HC1	C1	O5	C5	196.4	196.3
C3	C2	C1	S1	273.0	258.0
C3	C2	C1	O5	37.1	23.5
C3	C2	C1	HC1	149.6	147.4
C1	C2	C3	N2	119.0	124.0
C1	C2	C3	HC2	240.2	240.3
N2	C2	C3	HC2	121.2	116.3
C3	C2	N2	C7	96.5	110.9
C4	C3	C2	O3	123.6	120.6
C4	C3	C2	HC3	242.9	239.5
C2	C3	C4	C5	53.4	52.2
C2	C3	C4	O4	174.5	171.9
C2	C3	C4	HC4	294.3	292.8
O3	C3	C2	HC3	119.3	118.9
C2	C3	O3	HO3	180.0	180.0
N2	C2	C1	S1	33.0	20.5
N2	C2	C1	O5	157.0	146.0
N2	C2	C1	HC1	269.6	269.9
C1	C2	N2	C3	238.6	234.2
C1	C2	N2	HC2	119.8	117.8
C3	C2	N2	HC2	241.2	243.6
N2	C2	C3	C4	199.5	206.5
N2	C2	C3	O3	75.9	85.9
N2	C2	C3	HC3	316.6	327.1
C8	C7	N2	C2	182.0	179.4
C2	N2	C7	S1	3.0	359.7
HC2	C2	C1	S1	154.2	138.2
HC2	C2	C1	O5	278.3	263.8
HC2	C2	C1	HC1	30.9	27.6
C1	C2	HC2	C3	121.3	123.6
C1	C2	HC2	N2	241.1	240.2
C3	C2	HC2	N2	119.8	116.7
HC2	C2	C3	C4	78.3	90.2
HC2	C2	C3	O3	314.7	329.6
HC2	C2	C3	HC3	195.4	210.8
HC2	C2	N2	C7	215.3	227.2
C4	C3	C2	N2	199.5	206.5
C4	C3	C2	HC2	78.3	90.2
C2	C3	C4	O3	236.8	239.3
C2	C3	C4	HC3	117.5	120.6
O3	C3	C4	HC3	240.7	241.3
C4	C3	O3	HO3	55.0	57.6
C5	C4	C3	O4	238.9	240.3
C5	C4	C3	HC4	119.1	119.4
C3	C4	C5	C6	181.1	170.4
C3	C4	C5	O5	302.0	290.1
C3	C4	C5	HC5	63.0	49.6
O4	C4	C3	HC4	240.2	239.1
C3	C4	O4	HO4	180.0	180.0
O3	C3	C2	N2	75.9	85.9
O3	C3	C2	HC2	314.7	329.6
C2	C3	O3	C4	125.0	122.4
C2	C3	O3	HC3	242.2	241.1
C4	C3	O3	HC3	117.3	118.7
O3	C3	C4	C5	176.5	172.9
O3	C3	C4	O4	297.6	292.6
O3	C3	C4	HC4	57.4	53.5
HC3	C3	C2	N2	316.6	327.1
HC3	C3	C2	HC2	195.4	210.8
C2	C3	HC3	C4	238.9	237.6
C2	C3	HC3	O3	119.2	118.9
C4	C3	HC3	O3	240.4	241.3
HC3	C3	C4	C5	295.8	291.6
HC3	C3	C4	O4	56.9	51.3
HC3	C3	C4	HC4	176.7	172.2
HC3	C3	O3	HO3	297.8	298.9
C1	O5	C5	C4	54.7	63.1
C5	C4	C3	O3	176.5	172.9
C5	C4	C3	HC3	295.8	291.6
C3	C4	C5	O4	120.4	119.7
C3	C4	C5	HC4	240.2	240.6
O4	C4	C5	HC4	119.8	120.9
C5	C4	O4	HO4	301.1	298.2
C6	C5	C4	O5	239.1	240.4
C6	C5	C4	HC5	118.2	120.9
C4	C5	C6	O6	187.4	180.1
C4	C5	C6	HC61	312.6	300.0
C4	C5	C6	HC62	62.2	60.0
O5	C5	C4	HC5	239.1	240.5
O4	C4	C3	O3	297.6	292.6
O4	C4	C3	HC3	56.9	51.3
C3	C4	O4	C5	238.9	241.8
C3	C4	O4	HC4	119.8	120.9
C5	C4	O4	HC4	240.9	239.1
O4	C4	C5	C6	60.7	50.8
O4	C4	C5	O5	181.6	170.4
O4	C4	C5	HC5	302.5	289.9
HC4	C4	C3	O3	57.4	53.5
HC4	C4	C3	HC3	176.7	172.2
C3	C4	HC4	C5	120.2	118.1
C3	C4	HC4	O4	240.4	239.0
C5	C4	HC4	O4	120.2	121.0
HC4	C4	C5	C6	300.9	289.9
HC4	C4	C5	O5	61.8	49.5
HC4	C4	C5	HC5	182.8	169.0
HC4	C4	O4	HO4	60.2	59.0
C1	O5	C5	C6	179.3	182.8
C6	C5	C4	O4	60.7	50.8
C6	C5	C4	HC4	300.9	289.9
C4	C5	C6	O5	122.3	118.4
C4	C5	C6	HC5	243.3	239.2
O5	C5	C6	HC5	121.1	120.9
O6	C6	C5	HC61	234.8	240.1
O6	C6	C5	HC62	125.3	120.1
C5	C6	O6	HO6	180.0	180.0
HC61	C6	C5	HC62	250.5	240.0
C5	O5	C1	HC1	196.4	196.3
O5	C5	C4	O4	181.6	170.4
O5	C5	C4	HC4	61.8	49.5
C4	C5	O5	C6	235.4	240.4
C4	C5	O5	HC5	116.9	119.5
C6	C5	O5	HC5	241.5	239.1
O5	C5	C6	O6	65.2	61.7
O5	C5	C6	HC61	190.4	181.6
O5	C5	C6	HC62	299.9	301.6
HC5	C5	C4	O4	302.5	289.9
HC5	C5	C4	HC4	182.8	169.0
C4	C5	HC5	C6	122.1	120.9
C4	C5	HC5	O5	240.3	241.7
C6	C5	HC5	O5	118.3	120.9
HC5	C5	C6	O6	304.1	300.9
HC5	C5	C6	HC61	69.3	60.8
HC5	C5	C6	HC62	178.8	180.8
O6	C6	C5	O5	65.2	61.7
O6	C6	C5	HC5	304.1	300.9
C5	C6	O6	HC61	125.2	119.9
C5	C6	O6	HC62	234.7	239.9
HC61	C6	O6	HC62	109.5	120.0
HC61	C6	C5	O5	190.4	181.6
HC61	C6	C5	HC5	69.3	60.8
C5	C6	HC61	O6	235.3	240.1
C5	C6	HC61	HC62	117.7	120.0
O6	C6	HC61	HC62	242.4	240.0
HC61	C6	O6	HO6	54.8	60.1
HC62	C6	C5	O5	299.9	301.6
HC62	C6	C5	HC5	178.8	180.8
C5	C6	HC62	O6	124.8	120.1
C5	C6	HC62	HC61	242.4	240.1
O6	C6	HC62	HC61	117.6	120.0
HC62	C6	O6	HO6	305.3	300.1
C1	S1	C7	C8	196.6	192.4
C2	N2	C7	C8	182.0	179.4
N2	C7	C8	S1	180.9	180.4
HC81	C8	C7	HC82	234.7	240.0
HC81	C8	C7	HC83	125.2	120.0
HC82	C8	C7	HC83	250.5	240.0
C1	S1	C7	N2	15.8	12.1
C7	N2	C2	HC2	215.3	227.2
C8	C7	N2	S1	179.1	179.7
N2	C7	C8	HC81	180.0	180.0
N2	C7	C8	HC82	305.3	300.0
N2	C7	C8	HC83	54.8	60.0
C7	S1	C1	O5	206.0	210.5
C7	S1	C1	HC1	93.1	91.5
C8	C7	S1	N2	180.9	180.3
S1	C7	C8	HC81	359.0	359.7
S1	C7	C8	HC82	124.3	119.7
S1	C7	C8	HC83	233.8	239.7
HC81	C8	C7	N2	180.0	180.0
HC81	C8	C7	S1	359.0	359.7
C7	C8	HC81	HC82	125.3	120.0
C7	C8	HC81	HC83	234.8	240.0
HC82	C8	HC81	HC83	109.4	120.0
HC82	C8	C7	N2	305.3	300.0
HC82	C8	C7	S1	124.3	119.7
C7	C8	HC82	HC81	223.4	240.0
C7	C8	HC82	HC83	111.8	120.0
HC81	C8	HC82	HC83	248.3	240.0
HC83	C8	C7	N2	54.8	60.0
HC83	C8	C7	S1	233.8	239.7
C7	C8	HC83	HC81	136.5	120.0
C7	C8	HC83	HC82	248.2	240.0
HC81	C8	HC83	HC82	111.7	120.0
HO3	O3	C3	HC3	297.8	298.9
HO4	O4	C4	HC4	60.2	59.0
HO6	O6	C6	HC61	54.8	60.1
HO6	O6	C6	HC62	305.3	300.1