PDB Chemical Component NFM
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for NFM
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N1 |
C1 |
1.422 |
1.330 |
| N3 |
C1 |
1.497 |
1.385 |
| C1 |
C4 |
1.419 |
1.396 |
| N1 |
C2 |
1.424 |
1.318 |
| C7 |
O1 |
1.210 |
1.213 |
| C5 |
C2 |
1.499 |
1.507 |
| C2 |
N2 |
1.410 |
1.318 |
| N2 |
C3 |
1.414 |
1.326 |
| C4 |
C3 |
1.416 |
1.381 |
| C3 |
H3 |
1.079 |
1.080 |
| N3 |
HN3 |
1.001 |
0.971 |
| N3 |
HN3A |
1.000 |
0.970 |
| C4 |
C6 |
1.501 |
1.507 |
| N4 |
C6 |
1.507 |
1.465 |
| N4 |
C7 |
1.387 |
1.348 |
| N4 |
HN4 |
1.000 |
0.970 |
| C5 |
H5 |
1.100 |
1.090 |
| C5 |
H5A |
1.100 |
1.090 |
| C5 |
H5B |
1.100 |
1.091 |
| C6 |
H6 |
1.100 |
1.090 |
| C6 |
H6A |
1.100 |
1.090 |
| C7 |
H7 |
1.080 |
1.080 |
Bond Angles for NFM
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N1 |
C1 |
C4 |
120.1 |
119.0 |
| N3 |
C1 |
C4 |
120.0 |
120.5 |
| C1 |
C4 |
C3 |
119.3 |
118.3 |
| C1 |
C4 |
C6 |
120.7 |
120.9 |
| N1 |
C2 |
N2 |
119.4 |
121.9 |
| C2 |
N2 |
C3 |
120.4 |
121.0 |
| N2 |
C3 |
H3 |
119.7 |
120.4 |
| C4 |
C3 |
H3 |
119.6 |
120.4 |
| HN3 |
N3 |
HN3A |
109.5 |
119.9 |
| C4 |
C6 |
N4 |
119.8 |
109.5 |
| C4 |
C6 |
H6 |
106.1 |
109.5 |
| C4 |
C6 |
H6A |
106.1 |
109.5 |
| C6 |
N4 |
C7 |
122.0 |
120.0 |
| C6 |
N4 |
HN4 |
119.0 |
120.0 |
| N4 |
C6 |
H6 |
106.1 |
109.5 |
| N4 |
C6 |
H6A |
106.2 |
109.4 |
| C7 |
N4 |
HN4 |
119.0 |
120.0 |
| N4 |
C7 |
H7 |
119.2 |
120.0 |
| H5 |
C5 |
H5A |
109.4 |
109.5 |
| H5 |
C5 |
H5B |
109.5 |
109.4 |
| H5A |
C5 |
H5B |
109.5 |
109.4 |
| H6 |
C6 |
H6A |
112.6 |
109.4 |
Torsion Angles for NFM
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N3 |
C1 |
N1 |
C4 |
179.9 |
180.3 |
| N1 |
C1 |
C4 |
C3 |
0.2 |
360.0 |
| N1 |
C1 |
C4 |
C6 |
180.2 |
180.0 |
| N1 |
C1 |
N3 |
C4 |
180.1 |
179.7 |
| N3 |
C1 |
C4 |
C3 |
180.3 |
179.7 |
| N3 |
C1 |
C4 |
C6 |
0.3 |
359.7 |
| C1 |
C4 |
C3 |
H3 |
179.8 |
180.0 |
| C1 |
C4 |
C6 |
N4 |
65.6 |
79.9 |
| C1 |
C4 |
C6 |
H6 |
185.6 |
200.0 |
| C1 |
C4 |
C6 |
H6A |
305.6 |
320.0 |
| C2 |
N1 |
C1 |
C4 |
360.0 |
360.0 |
| N1 |
C2 |
N2 |
C3 |
0.2 |
359.9 |
| C2 |
N2 |
C3 |
H3 |
180.0 |
180.1 |
| C1 |
C4 |
C3 |
N2 |
359.8 |
0.0 |
| C4 |
C3 |
N2 |
H3 |
180.0 |
180.0 |
| C1 |
C4 |
C3 |
C6 |
180.0 |
180.1 |
| N2 |
C3 |
C4 |
H3 |
180.0 |
180.0 |
| HN3 |
N3 |
C1 |
C4 |
179.9 |
0.0 |
| HN3A |
N3 |
C1 |
C4 |
299.9 |
180.0 |
| C1 |
C4 |
C6 |
C3 |
180.0 |
179.9 |
| C6 |
C4 |
C3 |
H3 |
359.8 |
359.9 |
| C4 |
C6 |
N4 |
C7 |
140.8 |
180.0 |
| C4 |
C6 |
N4 |
HN4 |
320.8 |
0.1 |
| N4 |
C6 |
C4 |
H6 |
240.0 |
239.9 |
| N4 |
C6 |
C4 |
H6A |
120.0 |
120.0 |
| H6 |
C6 |
C4 |
H6A |
240.0 |
240.0 |
| C4 |
C6 |
N4 |
H6 |
120.0 |
120.1 |
| C4 |
C6 |
N4 |
H6A |
240.0 |
240.0 |
| C7 |
N4 |
C6 |
HN4 |
180.0 |
179.9 |
| C6 |
N4 |
C7 |
H7 |
180.1 |
180.1 |
| H6 |
C6 |
N4 |
H6A |
120.0 |
120.0 |
| C6 |
N4 |
C7 |
HN4 |
180.0 |
180.1 |
| C7 |
N4 |
C6 |
H6 |
20.8 |
60.0 |
| C7 |
N4 |
C6 |
H6A |
260.8 |
300.0 |
| C6 |
N4 |
HN4 |
C7 |
180.0 |
179.9 |
| HN4 |
N4 |
C6 |
H6 |
200.8 |
240.1 |
| HN4 |
N4 |
C6 |
H6A |
80.8 |
120.1 |
| HN4 |
N4 |
C7 |
H7 |
0.1 |
360.0 |
| H5A |
C5 |
H5 |
H5B |
120.0 |
119.9 |
| H5 |
C5 |
H5A |
H5B |
240.0 |
240.0 |
| H5 |
C5 |
H5B |
H5A |
119.9 |
120.0 |
| C4 |
C6 |
H6 |
N4 |
231.5 |
240.0 |
| C4 |
C6 |
H6 |
H6A |
115.7 |
120.0 |
| H6 |
C6 |
N4 |
C7 |
20.8 |
60.0 |
| H6 |
C6 |
N4 |
HN4 |
200.8 |
240.1 |
| N4 |
C6 |
H6 |
H6A |
244.3 |
240.0 |
| C4 |
C6 |
H6A |
N4 |
128.6 |
120.0 |
| C4 |
C6 |
H6A |
H6 |
244.3 |
240.0 |
| H6A |
C6 |
N4 |
C7 |
260.8 |
300.0 |
| H6A |
C6 |
N4 |
HN4 |
80.8 |
120.1 |
| N4 |
C6 |
H6A |
H6 |
115.7 |
120.0 |
| H7 |
C7 |
N4 |
HN4 |
0.1 |
360.0 |