PDB Chemical Component NET

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NET

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C1 1.545 1.469
N1 C3 1.565 1.469
N1 C5 1.560 1.469
N1 C7 1.561 1.469
C1 C2 1.515 1.530
C1 H11 1.115 1.090
C1 H12 1.114 1.090
C2 H21 1.115 1.090
C2 H22 1.114 1.090
C2 H23 1.115 1.090
C3 C4 1.524 1.530
C3 H31 1.115 1.090
C3 H32 1.116 1.090
C4 H41 1.115 1.090
C4 H42 1.116 1.090
C4 H43 1.115 1.090
C5 C6 1.528 1.530
C5 H51 1.115 1.090
C5 H52 1.115 1.090
C6 H61 1.115 1.090
C6 H62 1.116 1.090
C6 H63 1.115 1.090
C7 C8 1.507 1.530
C7 H71 1.115 1.090
C7 H72 1.115 1.090
C8 H81 1.115 1.090
C8 H82 1.114 1.090
C8 H83 1.115 1.090

Bond Angles for NET

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C1 N1 C3 112.4 109.5
C1 N1 C5 105.9 109.5
C1 N1 C7 110.3 109.5
N1 C1 C2 113.0 109.5
N1 C1 H11 110.9 109.5
N1 C1 H12 110.9 109.5
C3 N1 C5 111.4 109.5
C3 N1 C7 108.3 109.5
N1 C3 C4 112.8 109.5
N1 C3 H31 111.1 109.5
N1 C3 H32 111.0 109.5
C5 N1 C7 108.6 109.5
N1 C5 C6 111.7 109.5
N1 C5 H51 111.4 109.5
N1 C5 H52 111.4 109.5
N1 C7 C8 108.7 109.5
N1 C7 H71 112.5 109.5
N1 C7 H72 112.5 109.5
C2 C1 H11 111.0 109.4
C2 C1 H12 110.9 109.4
C1 C2 H21 113.0 109.5
C1 C2 H22 110.9 109.5
C1 C2 H23 110.9 109.5
H11 C1 H12 99.4 109.5
H21 C2 H22 111.0 109.5
H21 C2 H23 111.0 109.5
H22 C2 H23 99.4 109.4
C4 C3 H31 111.0 109.4
C4 C3 H32 111.0 109.4
C3 C4 H41 112.7 109.5
C3 C4 H42 111.0 109.5
C3 C4 H43 111.0 109.4
H31 C3 H32 99.3 109.5
H41 C4 H42 111.0 109.5
H41 C4 H43 111.0 109.5
H42 C4 H43 99.4 109.5
C6 C5 H51 111.4 109.4
C6 C5 H52 111.3 109.4
C5 C6 H61 111.7 109.5
C5 C6 H62 111.4 109.5
C5 C6 H63 111.4 109.5
H51 C5 H52 99.0 109.5
H61 C6 H62 111.4 109.4
H61 C6 H63 111.4 109.5
H62 C6 H63 98.9 109.5
C8 C7 H71 112.5 109.4
C8 C7 H72 112.5 109.4
C7 C8 H81 108.7 109.5
C7 C8 H82 112.4 109.5
C7 C8 H83 112.5 109.5
H71 C7 H72 98.0 109.5
H81 C8 H82 112.6 109.5
H81 C8 H83 112.5 109.4
H82 C8 H83 98.0 109.5

Torsion Angles for NET

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C3 N1 C1 C5 121.8 240.0
C3 N1 C1 C7 239.1 120.0
C1 N1 C3 C4 313.9 300.0
C1 N1 C3 H31 79.2 60.0
C1 N1 C3 H32 188.7 180.0
C5 N1 C1 C7 117.3 240.0
C1 N1 C5 C6 167.7 60.0
C1 N1 C5 H51 293.0 180.0
C1 N1 C5 H52 42.6 300.0
C1 N1 C7 C8 75.7 180.0
C1 N1 C7 H71 200.9 300.0
C1 N1 C7 H72 310.4 60.0
C2 C1 N1 H11 234.7 120.0
C2 C1 N1 H12 125.3 240.0
N1 C1 C2 H21 180.0 180.0
N1 C1 C2 H22 305.3 300.0
N1 C1 C2 H23 54.7 60.0
H11 C1 N1 H12 250.5 120.1
C1 N1 C3 C5 241.4 120.0
C1 N1 C3 C7 122.0 240.0
C3 N1 C1 C2 304.0 300.0
C3 N1 C1 H11 69.3 180.0
C3 N1 C1 H12 178.7 60.0
C5 N1 C3 C7 240.6 120.0
C3 N1 C5 C6 45.3 180.0
C3 N1 C5 H51 170.6 300.0
C3 N1 C5 H52 280.1 60.0
C3 N1 C7 C8 199.1 60.0
C3 N1 C7 H71 324.3 180.0
C3 N1 C7 H72 73.8 300.0
C4 C3 N1 H31 234.7 240.0
C4 C3 N1 H32 125.2 120.0
N1 C3 C4 H41 180.0 180.0
N1 C3 C4 H42 305.2 300.0
N1 C3 C4 H43 54.7 60.0
H31 C3 N1 H32 250.5 239.9
C1 N1 C5 C3 122.4 240.0
C1 N1 C5 C7 241.6 120.0
C5 N1 C1 C2 182.2 60.0
C5 N1 C1 H11 307.5 300.0
C5 N1 C1 H12 57.0 180.0
C3 N1 C5 C7 119.2 240.0
C5 N1 C3 C4 72.5 180.0
C5 N1 C3 H31 197.8 300.0
C5 N1 C3 H32 307.2 60.0
C5 N1 C7 C8 320.1 300.0
C5 N1 C7 H71 85.4 60.0
C5 N1 C7 H72 194.8 180.0
C6 C5 N1 H51 234.7 240.0
C6 C5 N1 H52 125.2 120.0
N1 C5 C6 H61 180.0 300.0
N1 C5 C6 H62 305.3 60.0
N1 C5 C6 H63 54.7 180.0
H51 C5 N1 H52 250.5 239.9
C1 N1 C7 C3 236.7 120.0
C1 N1 C7 C5 115.6 240.0
C7 N1 C1 C2 64.9 180.0
C7 N1 C1 H11 190.2 60.0
C7 N1 C1 H12 299.7 300.0
C3 N1 C7 C5 238.9 120.0
C7 N1 C3 C4 191.9 60.0
C7 N1 C3 H31 317.1 180.0
C7 N1 C3 H32 66.6 300.0
C7 N1 C5 C6 286.1 300.0
C7 N1 C5 H51 51.4 60.0
C7 N1 C5 H52 161.0 180.0
C8 C7 N1 H71 234.8 240.0
C8 C7 N1 H72 125.3 120.0
N1 C7 C8 H81 180.0 60.0
N1 C7 C8 H82 305.3 180.0
N1 C7 C8 H83 54.7 300.0
H71 C7 N1 H72 250.5 239.9
C2 C1 N1 C3 304.0 300.0
C2 C1 N1 C5 182.2 60.0
C2 C1 N1 C7 64.9 180.0
N1 C1 C2 H11 125.2 240.0
N1 C1 C2 H12 234.7 120.0
H11 C1 C2 H12 109.5 240.0
H21 C2 C1 H22 234.7 240.0
H21 C2 C1 H23 125.3 120.0
H22 C2 C1 H23 250.6 240.1
H11 C1 N1 C3 69.3 180.0
H11 C1 N1 C5 307.5 300.0
H11 C1 N1 C7 190.2 60.0
N1 C1 H11 C2 233.6 120.0
N1 C1 H11 H12 116.8 240.0
C2 C1 H11 H12 243.2 119.9
H11 C1 C2 H21 54.8 300.0
H11 C1 C2 H22 180.1 60.1
H11 C1 C2 H23 289.5 180.0
H12 C1 N1 C3 178.7 60.0
H12 C1 N1 C5 57.0 180.0
H12 C1 N1 C7 299.7 300.0
N1 C1 H12 C2 126.4 240.0
N1 C1 H12 H11 243.3 120.1
C2 C1 H12 H11 116.8 240.1
H12 C1 C2 H21 305.3 60.0
H12 C1 C2 H22 70.6 180.0
H12 C1 C2 H23 180.0 300.0
H21 C2 C1 H11 54.8 300.0
H21 C2 C1 H12 305.3 60.0
C1 C2 H21 H22 125.3 120.0
C1 C2 H21 H23 234.8 240.0
H22 C2 H21 H23 109.5 119.9
H22 C2 C1 H11 180.1 60.1
H22 C2 C1 H12 70.6 180.0
C1 C2 H22 H21 233.6 240.0
C1 C2 H22 H23 116.7 120.0
H21 C2 H22 H23 243.2 240.0
H23 C2 C1 H11 289.5 180.0
H23 C2 C1 H12 180.0 300.0
C1 C2 H23 H21 126.4 120.1
C1 C2 H23 H22 243.2 240.0
H21 C2 H23 H22 116.8 120.0
C4 C3 N1 C5 72.5 180.0
C4 C3 N1 C7 191.9 60.0
N1 C3 C4 H31 125.3 120.0
N1 C3 C4 H32 234.7 240.0
H31 C3 C4 H32 109.4 120.0
H41 C4 C3 H42 234.8 240.0
H41 C4 C3 H43 125.3 120.0
H42 C4 C3 H43 250.5 240.0
H31 C3 N1 C5 197.8 300.0
H31 C3 N1 C7 317.1 180.0
N1 C3 H31 C4 233.7 240.0
N1 C3 H31 H32 116.9 120.0
C4 C3 H31 H32 243.2 240.1
H31 C3 C4 H41 54.7 60.0
H31 C3 C4 H42 179.9 180.0
H31 C3 C4 H43 289.4 300.0
H32 C3 N1 C5 307.2 60.0
H32 C3 N1 C7 66.6 300.0
N1 C3 H32 C4 126.2 120.0
N1 C3 H32 H31 243.1 239.9
C4 C3 H32 H31 116.8 119.9
H32 C3 C4 H41 305.3 300.0
H32 C3 C4 H42 70.5 60.0
H32 C3 C4 H43 180.0 180.0
H41 C4 C3 H31 54.7 60.0
H41 C4 C3 H32 305.3 300.0
C3 C4 H41 H42 125.2 120.0
C3 C4 H41 H43 234.7 240.0
H42 C4 H41 H43 109.5 120.0
H42 C4 C3 H31 179.9 180.0
H42 C4 C3 H32 70.5 60.0
C3 C4 H42 H41 233.8 240.0
C3 C4 H42 H43 116.9 120.0
H41 C4 H42 H43 243.0 240.0
H43 C4 C3 H31 289.4 300.0
H43 C4 C3 H32 180.0 180.0
C3 C4 H43 H41 126.2 120.0
C3 C4 H43 H42 243.1 240.0
H41 C4 H43 H42 116.9 120.0
C6 C5 N1 C7 286.1 300.0
N1 C5 C6 H51 125.3 120.0
N1 C5 C6 H52 234.8 240.0
H51 C5 C6 H52 109.5 120.0
H61 C6 C5 H62 234.8 240.1
H61 C6 C5 H63 125.3 120.0
H62 C6 C5 H63 250.5 240.0
H51 C5 N1 C7 51.4 60.0
N1 C5 H51 C6 234.6 240.0
N1 C5 H51 H52 117.3 120.0
C6 C5 H51 H52 242.7 240.1
H51 C5 C6 H61 54.8 180.0
H51 C5 C6 H62 180.0 299.9
H51 C5 C6 H63 289.5 60.0
H52 C5 N1 C7 161.0 180.0
N1 C5 H52 C6 125.4 120.0
N1 C5 H52 H51 242.7 239.9
C6 C5 H52 H51 117.3 119.9
H52 C5 C6 H61 305.2 60.0
H52 C5 C6 H62 70.5 180.0
H52 C5 C6 H63 180.0 300.0
H61 C6 C5 H51 54.8 180.0
H61 C6 C5 H52 305.2 60.0
C5 C6 H61 H62 125.3 120.0
C5 C6 H61 H63 234.7 239.9
H62 C6 H61 H63 109.4 120.0
H62 C6 C5 H51 180.0 299.9
H62 C6 C5 H52 70.5 180.0
C5 C6 H62 H61 234.6 240.0
C5 C6 H62 H63 117.3 120.0
H61 C6 H62 H63 242.7 240.0
H63 C6 C5 H51 289.5 60.0
H63 C6 C5 H52 180.0 300.0
C5 C6 H63 H61 125.4 120.0
C5 C6 H63 H62 242.7 240.0
H61 C6 H63 H62 117.3 119.9
N1 C7 C8 H71 125.2 120.0
N1 C7 C8 H72 234.7 240.0
H71 C7 C8 H72 109.5 120.0
H81 C8 C7 H82 234.7 240.0
H81 C8 C7 H83 125.2 119.9
H82 C8 C7 H83 250.6 240.0
N1 C7 H71 C8 236.9 240.0
N1 C7 H71 H72 118.4 120.1
C8 C7 H71 H72 241.5 240.1
H71 C7 C8 H81 54.7 300.0
H71 C7 C8 H82 180.1 60.0
H71 C7 C8 H83 289.5 180.0
N1 C7 H72 C8 123.2 120.0
N1 C7 H72 H71 241.6 240.0
C8 C7 H72 H71 118.4 119.9
H72 C7 C8 H81 305.2 180.0
H72 C7 C8 H82 70.6 300.0
H72 C7 C8 H83 180.0 60.1
H81 C8 C7 H71 54.7 300.0
H81 C8 C7 H72 305.2 180.0
C7 C8 H81 H82 125.3 120.1
C7 C8 H81 H83 234.8 240.0
H82 C8 H81 H83 109.5 120.0
H82 C8 C7 H71 180.1 60.0
H82 C8 C7 H72 70.6 300.0
C7 C8 H82 H81 236.8 240.0
C7 C8 H82 H83 118.4 120.0
H81 C8 H82 H83 241.5 240.1
H83 C8 C7 H71 289.5 180.0
H83 C8 C7 H72 180.0 60.1
C7 C8 H83 H81 123.1 120.0
C7 C8 H83 H82 241.6 240.0
H81 C8 H83 H82 118.5 120.0