PDB Chemical Component NEN
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for NEN
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O1 |
C2 |
1.231 |
1.212 |
N1 |
C2 |
1.397 |
1.337 |
N1 |
C3 |
1.394 |
1.339 |
N1 |
C5 |
1.465 |
1.465 |
C1 |
C2 |
1.488 |
1.513 |
C1 |
C4 |
1.532 |
1.541 |
C1 |
H11 |
1.116 |
1.091 |
C1 |
H12 |
1.115 |
1.090 |
O2 |
C3 |
1.219 |
1.212 |
C3 |
C4 |
1.544 |
1.513 |
C4 |
H41 |
1.115 |
1.090 |
C4 |
H42 |
1.115 |
1.090 |
C5 |
C6 |
1.529 |
1.529 |
C5 |
H51 |
1.114 |
1.089 |
C5 |
H52 |
1.115 |
1.089 |
C6 |
H61 |
1.115 |
1.090 |
C6 |
H62 |
1.115 |
1.089 |
C6 |
H63 |
1.114 |
1.090 |
Bond Angles for NEN
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C2 |
N1 |
124.8 |
125.4 |
O1 |
C2 |
C1 |
127.0 |
125.4 |
C2 |
N1 |
C3 |
112.5 |
114.5 |
C2 |
N1 |
C5 |
124.7 |
122.8 |
N1 |
C2 |
C1 |
108.2 |
109.2 |
C3 |
N1 |
C5 |
122.7 |
122.7 |
N1 |
C3 |
O2 |
125.5 |
125.4 |
N1 |
C3 |
C4 |
108.2 |
109.1 |
N1 |
C5 |
C6 |
111.6 |
109.5 |
N1 |
C5 |
H51 |
111.4 |
109.5 |
N1 |
C5 |
H52 |
111.4 |
109.5 |
C2 |
C1 |
C4 |
106.4 |
103.5 |
C2 |
C1 |
H11 |
113.4 |
110.6 |
C2 |
C1 |
H12 |
113.3 |
110.6 |
C4 |
C1 |
H11 |
113.4 |
110.6 |
C4 |
C1 |
H12 |
113.4 |
110.6 |
C1 |
C4 |
C3 |
102.8 |
103.6 |
C1 |
C4 |
H41 |
114.7 |
110.6 |
C1 |
C4 |
H42 |
114.7 |
110.6 |
H11 |
C1 |
H12 |
97.1 |
110.6 |
O2 |
C3 |
C4 |
126.4 |
125.4 |
C3 |
C4 |
H41 |
114.8 |
110.7 |
C3 |
C4 |
H42 |
114.8 |
110.5 |
H41 |
C4 |
H42 |
95.8 |
110.6 |
C6 |
C5 |
H51 |
111.4 |
109.5 |
C6 |
C5 |
H52 |
111.4 |
109.5 |
C5 |
C6 |
H61 |
111.6 |
109.5 |
C5 |
C6 |
H62 |
111.4 |
109.5 |
C5 |
C6 |
H63 |
111.4 |
109.4 |
H51 |
C5 |
H52 |
99.0 |
109.5 |
H61 |
C6 |
H62 |
111.4 |
109.5 |
H61 |
C6 |
H63 |
111.5 |
109.4 |
H62 |
C6 |
H63 |
99.0 |
109.4 |
Torsion Angles for NEN
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C2 |
N1 |
C3 |
185.5 |
180.3 |
O1 |
C2 |
N1 |
C5 |
6.6 |
360.0 |
N1 |
C2 |
O1 |
C1 |
181.1 |
180.0 |
O1 |
C2 |
C1 |
C4 |
168.3 |
180.0 |
O1 |
C2 |
C1 |
H11 |
293.6 |
298.5 |
O1 |
C2 |
C1 |
H12 |
43.1 |
61.4 |
O1 |
C2 |
N1 |
C1 |
179.1 |
180.0 |
C3 |
N1 |
C2 |
C5 |
178.9 |
180.3 |
C2 |
N1 |
C3 |
O2 |
183.4 |
179.9 |
C2 |
N1 |
C3 |
C4 |
2.5 |
359.6 |
C2 |
N1 |
C5 |
C6 |
90.9 |
90.0 |
C2 |
N1 |
C5 |
H51 |
216.2 |
330.0 |
C2 |
N1 |
C5 |
H52 |
325.7 |
210.0 |
N1 |
C2 |
C1 |
C4 |
347.4 |
0.0 |
N1 |
C2 |
C1 |
H11 |
112.7 |
118.5 |
N1 |
C2 |
C1 |
H12 |
222.1 |
241.4 |
C2 |
N1 |
C3 |
C5 |
181.1 |
179.7 |
C3 |
N1 |
C2 |
C1 |
6.5 |
0.2 |
C3 |
N1 |
C5 |
C6 |
272.1 |
269.7 |
C3 |
N1 |
C5 |
H51 |
37.4 |
149.7 |
C3 |
N1 |
C5 |
H52 |
146.9 |
29.7 |
C1 |
C4 |
C3 |
N1 |
350.1 |
0.4 |
O2 |
C3 |
N1 |
C4 |
180.9 |
180.3 |
N1 |
C3 |
C4 |
H41 |
224.9 |
241.7 |
N1 |
C3 |
C4 |
H42 |
115.3 |
118.8 |
C2 |
N1 |
C5 |
C3 |
178.8 |
180.3 |
C5 |
N1 |
C2 |
C1 |
187.6 |
180.0 |
C5 |
N1 |
C3 |
O2 |
2.3 |
0.2 |
C5 |
N1 |
C3 |
C4 |
181.4 |
179.9 |
C6 |
C5 |
N1 |
H51 |
234.7 |
120.0 |
C6 |
C5 |
N1 |
H52 |
125.2 |
240.0 |
N1 |
C5 |
C6 |
H61 |
180.1 |
180.0 |
N1 |
C5 |
C6 |
H62 |
305.2 |
300.1 |
N1 |
C5 |
C6 |
H63 |
54.7 |
60.1 |
H51 |
C5 |
N1 |
H52 |
250.5 |
120.0 |
O1 |
C2 |
C1 |
N1 |
181.0 |
180.0 |
C1 |
C2 |
N1 |
C3 |
6.5 |
0.2 |
C1 |
C2 |
N1 |
C5 |
187.6 |
180.0 |
C4 |
C1 |
C2 |
H11 |
234.7 |
241.5 |
C4 |
C1 |
C2 |
H12 |
125.3 |
118.6 |
C2 |
C1 |
C4 |
C3 |
13.3 |
359.8 |
C2 |
C1 |
C4 |
H41 |
138.7 |
118.5 |
C2 |
C1 |
C4 |
H42 |
248.1 |
241.4 |
H11 |
C1 |
C2 |
H12 |
250.6 |
237.1 |
N1 |
C3 |
C4 |
C1 |
350.1 |
0.4 |
C2 |
C1 |
C4 |
H11 |
125.3 |
118.5 |
C2 |
C1 |
C4 |
H12 |
234.8 |
241.4 |
H11 |
C1 |
C4 |
H12 |
109.5 |
122.9 |
O2 |
C3 |
C4 |
C1 |
169.2 |
180.0 |
C3 |
C4 |
C1 |
H41 |
234.7 |
241.3 |
C3 |
C4 |
C1 |
H42 |
125.3 |
118.4 |
H41 |
C4 |
C1 |
H42 |
250.6 |
237.1 |
C2 |
C1 |
H11 |
C4 |
238.5 |
245.9 |
C2 |
C1 |
H11 |
H12 |
119.2 |
122.9 |
C4 |
C1 |
H11 |
H12 |
240.7 |
237.1 |
H11 |
C1 |
C4 |
C3 |
248.0 |
241.3 |
H11 |
C1 |
C4 |
H41 |
13.4 |
360.0 |
H11 |
C1 |
C4 |
H42 |
122.8 |
122.9 |
C2 |
C1 |
H12 |
C4 |
121.4 |
114.2 |
C2 |
C1 |
H12 |
H11 |
240.7 |
237.1 |
C4 |
C1 |
H12 |
H11 |
119.3 |
122.9 |
H12 |
C1 |
C4 |
C3 |
138.6 |
118.4 |
H12 |
C1 |
C4 |
H41 |
263.9 |
237.1 |
H12 |
C1 |
C4 |
H42 |
13.3 |
360.0 |
O2 |
C3 |
N1 |
C5 |
2.3 |
0.2 |
N1 |
C3 |
O2 |
C4 |
178.9 |
179.6 |
C1 |
C4 |
C3 |
O2 |
169.2 |
180.0 |
O2 |
C3 |
C4 |
H41 |
43.9 |
61.4 |
O2 |
C3 |
C4 |
H42 |
294.4 |
298.5 |
C4 |
C3 |
N1 |
C5 |
181.4 |
179.9 |
N1 |
C3 |
C4 |
O2 |
180.9 |
180.3 |
C3 |
C4 |
C1 |
H11 |
248.0 |
241.3 |
C3 |
C4 |
C1 |
H12 |
138.6 |
118.4 |
C1 |
C4 |
C3 |
H41 |
125.2 |
118.6 |
C1 |
C4 |
C3 |
H42 |
234.8 |
241.5 |
H41 |
C4 |
C3 |
H42 |
109.6 |
122.9 |
H41 |
C4 |
C1 |
H11 |
13.4 |
360.0 |
H41 |
C4 |
C1 |
H12 |
263.9 |
237.1 |
C1 |
C4 |
H41 |
C3 |
241.2 |
245.7 |
C1 |
C4 |
H41 |
H42 |
120.5 |
122.9 |
C3 |
C4 |
H41 |
H42 |
239.3 |
237.2 |
H42 |
C4 |
C1 |
H11 |
122.8 |
122.9 |
H42 |
C4 |
C1 |
H12 |
13.3 |
360.0 |
C1 |
C4 |
H42 |
C3 |
118.8 |
114.1 |
C1 |
C4 |
H42 |
H41 |
239.5 |
237.1 |
C3 |
C4 |
H42 |
H41 |
120.7 |
122.9 |
N1 |
C5 |
C6 |
H51 |
125.3 |
240.0 |
N1 |
C5 |
C6 |
H52 |
234.8 |
120.0 |
H51 |
C5 |
C6 |
H52 |
109.5 |
240.0 |
H61 |
C6 |
C5 |
H62 |
234.8 |
239.9 |
H61 |
C6 |
C5 |
H63 |
125.3 |
119.9 |
H62 |
C6 |
C5 |
H63 |
250.5 |
240.0 |
N1 |
C5 |
H51 |
C6 |
234.6 |
120.0 |
N1 |
C5 |
H51 |
H52 |
117.3 |
240.0 |
C6 |
C5 |
H51 |
H52 |
242.7 |
120.0 |
H51 |
C5 |
C6 |
H61 |
54.8 |
300.0 |
H51 |
C5 |
C6 |
H62 |
180.0 |
60.1 |
H51 |
C5 |
C6 |
H63 |
289.4 |
180.0 |
N1 |
C5 |
H52 |
C6 |
125.4 |
240.0 |
N1 |
C5 |
H52 |
H51 |
242.7 |
120.0 |
C6 |
C5 |
H52 |
H51 |
117.3 |
240.0 |
H52 |
C5 |
C6 |
H61 |
305.3 |
60.0 |
H52 |
C5 |
C6 |
H62 |
70.5 |
180.1 |
H52 |
C5 |
C6 |
H63 |
179.9 |
300.0 |
H61 |
C6 |
C5 |
H51 |
54.8 |
300.0 |
H61 |
C6 |
C5 |
H52 |
305.3 |
60.0 |
C5 |
C6 |
H61 |
H62 |
125.2 |
120.1 |
C5 |
C6 |
H61 |
H63 |
234.7 |
240.1 |
H62 |
C6 |
H61 |
H63 |
109.5 |
120.0 |
H62 |
C6 |
C5 |
H51 |
180.0 |
60.1 |
H62 |
C6 |
C5 |
H52 |
70.5 |
180.1 |
C5 |
C6 |
H62 |
H61 |
234.7 |
240.0 |
C5 |
C6 |
H62 |
H63 |
117.3 |
120.0 |
H61 |
C6 |
H62 |
H63 |
242.6 |
240.0 |
H63 |
C6 |
C5 |
H51 |
289.4 |
180.0 |
H63 |
C6 |
C5 |
H52 |
179.9 |
300.0 |
C5 |
C6 |
H63 |
H61 |
125.4 |
120.0 |
C5 |
C6 |
H63 |
H62 |
242.7 |
240.0 |
H61 |
C6 |
H63 |
H62 |
117.3 |
120.1 |