PDB Chemical Component NBB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NBB

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O1S	S	1.435	1.420
S	O2S	1.447	1.421
S	N10	1.616	1.655
S	C4	1.602	1.762
N10	C11	1.460	1.464
N10	H10	1.020	0.970
C11	C12	1.524	1.530
C11	H111	1.115	1.091
C11	H112	1.115	1.089
C12	C13	1.530	1.529
C12	H121	1.115	1.090
C12	H122	1.115	1.090
C13	C14	1.517	1.530
C13	H131	1.115	1.091
C13	H132	1.115	1.090
C14	H141	1.115	1.090
C14	H142	1.115	1.089
C14	H143	1.115	1.090
C4	C5	1.395	1.381
C4	C3	1.394	1.382
C5	C6	1.392	1.383
C5	H5	1.103	1.080
C6	C1	1.394	1.382
C6	H6	1.103	1.080
C1	C2	1.397	1.383
C1	H1	1.103	1.080
C2	C3	1.395	1.383
C2	H2	1.103	1.080
C3	H3	1.103	1.079

Bond Angles for NBB

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1S	S	O2S	107.5	125.3
O1S	S	N10	113.6	105.8
O1S	S	C4	105.4	105.8
O2S	S	N10	107.5	105.8
O2S	S	C4	113.1	105.7
N10	S	C4	109.9	107.4
S	N10	C11	121.2	120.0
S	N10	H10	108.0	120.0
S	C4	C5	118.7	120.0
S	C4	C3	121.8	119.9
C11	N10	H10	108.0	120.0
N10	C11	C12	114.2	109.5
N10	C11	H111	110.5	109.5
N10	C11	H112	110.5	109.5
C12	C11	H111	110.5	109.4
C12	C11	H112	110.4	109.5
C11	C12	C13	109.9	109.5
C11	C12	H121	112.1	109.5
C11	C12	H122	112.1	109.5
H111	C11	H112	99.8	109.4
C13	C12	H121	112.1	109.4
C13	C12	H122	112.1	109.4
C12	C13	C14	113.5	109.5
C12	C13	H131	110.7	109.5
C12	C13	H132	110.7	109.5
H121	C12	H122	98.3	109.5
C14	C13	H131	110.8	109.4
C14	C13	H132	110.7	109.5
C13	C14	H141	110.8	109.5
C13	C14	H142	113.5	109.5
C13	C14	H143	110.7	109.5
H131	C13	H132	99.6	109.4
H141	C14	H142	110.7	109.5
H141	C14	H143	99.6	109.4
H142	C14	H143	110.7	109.5
C5	C4	C3	119.5	120.1
C4	C5	C6	120.7	120.0
C4	C5	H5	119.7	120.0
C4	C3	C2	120.0	120.0
C4	C3	H3	120.0	120.1
C6	C5	H5	119.5	120.0
C5	C6	C1	119.7	120.0
C5	C6	H6	120.0	120.0
C1	C6	H6	120.2	120.0
C6	C1	C2	119.8	120.0
C6	C1	H1	120.0	120.0
C2	C1	H1	120.2	120.0
C1	C2	C3	120.2	120.0
C1	C2	H2	119.9	120.0
C3	C2	H2	119.8	120.0
C2	C3	H3	120.0	119.9

Torsion Angles for NBB

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O2S	S	O1S	N10	118.8	236.8
O2S	S	O1S	C4	239.1	123.1
N10	S	O1S	C4	120.3	246.3
O1S	S	N10	C11	238.7	172.6
O1S	S	N10	H10	113.4	352.6
O1S	S	C4	C5	58.8	157.1
O1S	S	C4	C3	239.1	337.4
O1S	S	O2S	N10	237.4	123.2
O1S	S	O2S	C4	116.0	236.9
N10	S	O2S	C4	238.5	113.7
O2S	S	N10	C11	119.9	307.4
O2S	S	N10	H10	354.7	127.4
O2S	S	C4	C5	176.0	22.3
O2S	S	C4	C3	356.2	202.7
O1S	S	N10	O2S	118.7	225.2
O1S	S	N10	C4	242.2	112.7
O2S	S	N10	C4	123.5	247.5
N10	S	C4	C5	296.1	269.7
N10	S	C4	C3	116.3	90.1
C11	N10	S	H10	125.3	180.0
S	N10	C11	C12	196.9	180.0
S	N10	C11	H111	71.7	60.0
S	N10	C11	H112	322.2	300.0
O1S	S	C4	O2S	242.9	134.8
O1S	S	C4	N10	122.7	247.3
O2S	S	C4	N10	239.9	112.6
C4	S	N10	C11	356.5	60.0
C4	S	N10	H10	231.2	240.0
C5	C4	S	C3	179.8	179.6
S	C4	C5	C6	180.2	179.8
S	C4	C5	H5	0.2	0.2
S	C4	C3	C2	179.4	180.0
S	C4	C3	H3	359.4	359.9
C11	N10	S	C4	356.5	60.0
S	N10	C11	H10	234.8	180.0
C12	C11	N10	H111	125.3	120.0
C12	C11	N10	H112	234.8	239.9
N10	C11	C12	C13	166.8	180.0
N10	C11	C12	H121	41.5	60.0
N10	C11	C12	H122	292.1	300.0
H111	C11	N10	H112	109.5	120.0
H10	N10	S	C4	231.2	240.0
S	N10	H10	C11	132.7	180.0
H10	N10	C11	C12	322.2	359.9
H10	N10	C11	H111	196.9	240.0
H10	N10	C11	H112	87.4	120.0
C12	C11	N10	H10	322.2	359.9
N10	C11	C12	H111	234.7	240.0
N10	C11	C12	H112	125.3	120.1
H111	C11	C12	H112	250.5	240.1
C13	C12	C11	H121	125.3	120.0
C13	C12	C11	H122	234.7	240.0
C11	C12	C13	C14	151.9	180.0
C11	C12	C13	H131	26.6	60.0
C11	C12	C13	H132	277.1	300.1
H121	C12	C11	H122	109.4	120.0
H111	C11	N10	H10	196.9	240.0
N10	C11	H111	C12	127.4	120.0
N10	C11	H111	H112	243.7	240.0
C12	C11	H111	H112	116.3	120.0
H111	C11	C12	C13	292.0	300.0
H111	C11	C12	H121	166.7	180.0
H111	C11	C12	H122	57.3	60.0
H112	C11	N10	H10	87.4	120.0
N10	C11	H112	C12	232.6	239.9
N10	C11	H112	H111	116.3	120.0
C12	C11	H112	H111	243.7	240.1
H112	C11	C12	C13	41.5	59.9
H112	C11	C12	H121	276.2	300.0
H112	C11	C12	H122	166.8	179.9
C13	C12	C11	H111	292.0	300.0
C13	C12	C11	H112	41.5	59.9
C11	C12	C13	H121	234.7	240.0
C11	C12	C13	H122	125.3	120.1
H121	C12	C13	H122	250.6	240.1
C14	C13	C12	H131	125.2	120.0
C14	C13	C12	H132	234.7	239.9
C12	C13	C14	H141	54.7	180.0
C12	C13	C14	H142	180.0	300.0
C12	C13	C14	H143	305.3	60.1
H131	C13	C12	H132	109.5	120.0
H121	C12	C11	H111	166.7	180.0
H121	C12	C11	H112	276.2	300.0
C11	C12	H121	C13	124.1	120.0
C11	C12	H121	H122	242.0	239.9
C13	C12	H121	H122	118.0	119.9
H121	C12	C13	C14	277.1	300.0
H121	C12	C13	H131	151.9	180.0
H121	C12	C13	H132	42.4	60.1
H122	C12	C11	H111	57.3	60.0
H122	C12	C11	H112	166.8	179.9
C11	C12	H122	C13	235.9	239.9
C11	C12	H122	H121	118.0	120.0
C13	C12	H122	H121	242.0	240.1
H122	C12	C13	C14	26.6	59.9
H122	C12	C13	H131	261.3	300.0
H122	C12	C13	H132	151.8	180.0
C14	C13	C12	H121	277.1	300.0
C14	C13	C12	H122	26.6	59.9
C12	C13	C14	H131	234.8	240.0
C12	C13	C14	H132	125.3	120.1
H131	C13	C14	H132	250.5	240.1
H141	C14	C13	H142	234.7	240.0
H141	C14	C13	H143	109.5	119.9
H142	C14	C13	H143	234.8	239.9
H131	C13	C12	H121	151.9	180.0
H131	C13	C12	H122	261.3	300.0
C12	C13	H131	C14	126.8	120.0
C12	C13	H131	H132	243.4	240.0
C14	C13	H131	H132	116.6	120.0
H131	C13	C14	H141	180.0	300.0
H131	C13	C14	H142	305.2	60.0
H131	C13	C14	H143	70.5	180.1
H132	C13	C12	H121	42.4	60.1
H132	C13	C12	H122	151.8	180.0
C12	C13	H132	C14	233.2	239.9
C12	C13	H132	H131	116.6	120.0
C14	C13	H132	H131	243.4	240.1
H132	C13	C14	H141	289.5	59.9
H132	C13	C14	H142	54.8	179.9
H132	C13	C14	H143	180.0	300.0
H141	C14	C13	H131	180.0	300.0
H141	C14	C13	H132	289.5	59.9
C13	C14	H141	H142	126.8	120.0
C13	C14	H141	H143	243.4	240.0
H142	C14	H141	H143	116.6	120.0
H142	C14	C13	H131	305.2	60.0
H142	C14	C13	H132	54.8	179.9
C13	C14	H142	H141	234.7	240.0
C13	C14	H142	H143	125.2	120.0
H141	C14	H142	H143	250.5	240.1
H143	C14	C13	H131	70.5	180.1
H143	C14	C13	H132	180.0	300.0
C13	C14	H143	H141	116.7	120.0
C13	C14	H143	H142	233.2	240.0
H141	C14	H143	H142	116.6	120.0
S	C4	C5	C3	180.2	180.4
C5	C4	C3	C2	359.6	0.4
C5	C4	C3	H3	179.6	180.2
C6	C5	C4	H5	180.0	179.6
C4	C5	C6	C1	0.4	0.5
C4	C5	C6	H6	180.4	180.3
S	C4	C3	C5	179.8	179.6
C3	C4	C5	C6	360.0	359.5
C3	C4	C5	H5	180.0	179.9
C1	C2	C3	C4	0.3	359.9
C4	C3	C2	H2	180.3	179.9
C2	C3	C4	H3	180.0	180.1
C6	C5	C4	C3	360.0	359.5
C4	C5	C6	H5	180.0	180.4
C1	C6	C5	H6	180.0	180.1
C5	C6	C1	C2	359.6	359.8
C5	C6	C1	H1	179.6	179.9
H5	C5	C4	C3	180.0	179.9
C4	C5	H5	C6	180.0	179.6
H5	C5	C6	C1	180.4	180.0
H5	C5	C6	H6	0.4	359.9
C1	C6	C5	H5	180.4	180.0
C5	C6	C1	H6	180.0	179.9
C2	C1	C6	H1	180.0	179.9
C6	C1	C2	C3	0.1	0.0
C6	C1	C2	H2	180.1	180.0
H6	C6	C5	H5	0.4	359.9
C5	C6	H6	C1	180.0	180.1
H6	C6	C1	C2	179.6	180.0
H6	C6	C1	H1	359.6	0.0
C4	C3	C2	C1	0.3	359.9
C2	C1	C6	H6	179.6	180.0
C6	C1	C2	H1	180.0	180.1
C3	C2	C1	H2	180.0	180.0
C1	C2	C3	H3	180.3	180.0
H1	C1	C6	H6	359.6	0.0
C6	C1	H1	C2	180.0	179.9
H1	C1	C2	C3	180.1	180.0
H1	C1	C2	H2	0.1	360.0
C4	C3	C2	H3	180.0	179.9
C3	C2	C1	H1	180.1	180.0
C1	C2	C3	H2	180.0	180.0
H2	C2	C1	H1	0.1	360.0
C1	C2	H2	C3	180.0	180.0
H2	C2	C3	H3	0.3	0.0
C4	C3	H3	C2	180.0	180.1
H3	C3	C2	H2	0.3	0.0