PDB Chemical Component NAA

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for NAA

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.554	1.530
C1	O1	1.422	1.429
C1	O5	1.435	1.425
C1	H1	1.116	1.090
C2	C3	1.569	1.532
C2	N2	1.428	1.465
C2	H2	1.115	1.090
C3	C4	1.549	1.534
C3	O3	1.432	1.428
C3	H3	1.115	1.089
C4	C5	1.563	1.529
C4	O4	1.428	1.429
C4	H4	1.114	1.090
C5	C6	1.533	1.530
C5	O5	1.435	1.426
C5	H5	1.115	1.090
C6	O6	1.407	1.429
C6	H61	1.115	1.089
C6	H62	1.115	1.091
C7	C8	1.437	1.507
C7	N2	1.354	1.347
C7	O7	1.273	1.212
C8	H81	1.114	1.090
C8	H82	1.114	1.089
C8	H83	1.116	1.089
N2	HN2	1.020	0.970
O1	HO1	0.950	0.967
O3	HO3	0.950	0.966
O4	HO4	0.951	0.966
O6	HO6	0.950	0.967

Bond Angles for NAA

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O1	107.8	109.4
C2	C1	O5	110.3	109.8
C2	C1	H1	108.7	109.4
C1	C2	C3	110.0	109.1
C1	C2	N2	109.1	109.5
C1	C2	H2	110.1	109.6
O1	C1	O5	105.3	109.4
O1	C1	H1	113.5	109.4
C1	O1	HO1	107.8	106.8
O5	C1	H1	111.2	109.4
C1	O5	C5	105.5	107.6
C3	C2	N2	111.7	109.5
C3	C2	H2	107.5	109.6
C2	C3	C4	108.6	108.6
C2	C3	O3	111.7	109.7
C2	C3	H3	108.1	109.8
N2	C2	H2	108.4	109.5
C2	N2	C7	127.2	120.0
C2	N2	HN2	119.4	120.0
C4	C3	O3	107.9	109.6
C4	C3	H3	111.9	109.5
C3	C4	C5	104.9	109.1
C3	C4	O4	104.6	109.6
C3	C4	H4	115.6	109.5
O3	C3	H3	108.7	109.6
C3	O3	HO3	111.7	106.8
C5	C4	O4	110.3	109.6
C5	C4	H4	110.4	109.5
C4	C5	C6	116.9	109.4
C4	C5	O5	108.8	109.9
C4	C5	H5	103.6	109.5
O4	C4	H4	110.7	109.6
C4	O4	HO4	104.7	106.8
C6	C5	O5	105.4	109.4
C6	C5	H5	107.1	109.3
C5	C6	O6	109.7	109.6
C5	C6	H61	112.1	109.5
C5	C6	H62	112.1	109.4
O5	C5	H5	115.5	109.3
O6	C6	H61	112.2	109.4
O6	C6	H62	112.2	109.4
C6	O6	HO6	109.6	106.8
H61	C6	H62	98.2	109.5
C8	C7	N2	117.3	120.0
C8	C7	O7	119.8	120.0
C7	C8	H81	117.3	109.5
C7	C8	H82	109.4	109.5
C7	C8	H83	109.4	109.4
N2	C7	O7	123.0	120.0
C7	N2	HN2	113.3	120.0
H81	C8	H82	109.5	109.4
H81	C8	H83	109.4	109.4
H82	C8	H83	100.7	109.5

Torsion Angles for NAA

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	C2	O5	114.4	120.1
O1	C1	C2	H1	236.6	240.1
C2	C1	O1	HO1	180.0	180.0
O5	C1	C2	H1	122.1	120.1
C2	C1	O5	C5	293.1	292.5
C3	C2	C1	N2	237.2	240.1
C3	C2	C1	H2	118.3	120.0
C1	C2	C3	C4	307.9	306.4
C1	C2	C3	O3	66.7	66.1
C1	C2	C3	H3	186.3	186.6
N2	C2	C1	H2	241.1	239.8
C1	C2	N2	C7	140.4	90.2
C1	C2	N2	HN2	320.4	270.2
C2	C1	O1	O5	242.3	239.7
C2	C1	O1	H1	120.5	119.8
O1	C1	C2	C3	171.5	181.3
O1	C1	C2	N2	294.4	301.2
O1	C1	C2	H2	53.3	61.3
O5	C1	O1	H1	238.2	240.1
O1	C1	O5	C5	177.1	172.4
C2	C1	O5	O1	116.1	120.1
C2	C1	O5	H1	239.4	239.9
O5	C1	C2	C3	57.1	61.2
O5	C1	C2	N2	179.9	181.1
O5	C1	C2	H2	298.8	301.3
O1	C1	O5	H1	123.3	119.9
O5	C1	O1	HO1	297.7	300.3
C4	C5	O5	C1	74.3	67.5
C6	C5	O5	C1	200.4	187.7
C1	O5	C5	H5	318.4	307.4
C2	C1	H1	O1	240.0	240.2
C2	C1	H1	O5	121.6	120.3
H1	C1	C2	C3	295.0	301.1
H1	C1	C2	N2	57.8	61.0
H1	C1	C2	H2	176.7	181.2
O1	C1	H1	O5	241.6	240.2
H1	C1	O1	HO1	59.5	60.2
H1	C1	O5	C5	53.8	52.5
C3	C2	C1	O1	171.5	181.3
C3	C2	C1	O5	57.1	61.2
C3	C2	C1	H1	295.0	301.1
C1	C2	C3	N2	121.3	119.9
C1	C2	C3	H2	240.1	240.0
N2	C2	C3	H2	118.8	120.1
C3	C2	N2	C7	262.3	209.8
C3	C2	N2	HN2	82.2	29.8
C4	C3	C2	O3	241.2	240.3
C4	C3	C2	H3	121.6	119.8
C2	C3	C4	C5	56.3	53.6
C2	C3	C4	O4	172.4	173.5
C2	C3	C4	H4	294.4	293.7
O3	C3	C2	H3	240.4	239.5
C2	C3	O3	HO3	180.0	180.8
N2	C2	C1	O1	294.4	301.2
N2	C2	C1	O5	179.9	181.1
N2	C2	C1	H1	57.8	61.0
C1	C2	N2	C3	238.2	240.4
C1	C2	N2	H2	120.0	120.2
C3	C2	N2	H2	241.8	239.8
N2	C2	C3	C4	186.5	186.5
N2	C2	C3	O3	305.4	306.2
N2	C2	C3	H3	64.9	66.7
C8	C7	N2	C2	1.5	180.0
C2	N2	C7	O7	181.7	0.0
C7	N2	C2	HN2	180.0	180.0
H2	C2	C1	O1	53.3	61.3
H2	C2	C1	O5	298.8	301.3
H2	C2	C1	H1	176.7	181.2
C1	C2	H2	C3	119.8	119.7
C1	C2	H2	N2	240.7	239.8
C3	C2	H2	N2	120.9	120.1
H2	C2	C3	C4	67.8	66.4
H2	C2	C3	O3	186.6	186.1
H2	C2	C3	H3	306.2	306.6
H2	C2	N2	C7	20.5	330.0
H2	C2	N2	HN2	200.4	150.0
C4	C3	C2	N2	186.5	186.5
C4	C3	C2	H2	67.8	66.4
C2	C3	C4	O3	121.2	119.8
C2	C3	C4	H3	240.8	240.1
O3	C3	C4	H3	119.6	120.3
C4	C3	O3	HO3	299.3	299.9
C5	C4	C3	O4	243.9	240.0
C5	C4	C3	H4	121.9	119.8
C3	C4	C5	C6	171.5	178.7
C3	C4	C5	O5	290.6	298.8
C3	C4	C5	H5	54.0	58.9
O4	C4	C3	H4	238.0	239.8
C3	C4	O4	HO4	180.0	180.3
O3	C3	C2	N2	305.4	306.2
O3	C3	C2	H2	186.6	186.1
C2	C3	O3	C4	240.8	240.9
C2	C3	O3	H3	119.2	120.6
C4	C3	O3	H3	238.4	239.8
O3	C3	C4	C5	295.1	293.8
O3	C3	C4	O4	51.2	53.7
O3	C3	C4	H4	173.2	174.0
H3	C3	C2	N2	64.9	66.7
H3	C3	C2	H2	306.2	306.6
C2	C3	H3	C4	119.5	119.2
C2	C3	H3	O3	238.6	239.5
C4	C3	H3	O3	119.0	120.3
H3	C3	C4	C5	175.6	173.5
H3	C3	C4	O4	291.6	293.4
H3	C3	C4	H4	53.7	53.7
H3	C3	O3	HO3	60.8	60.2
C1	O5	C5	C4	74.3	67.5
C5	C4	C3	O3	295.1	293.8
C5	C4	C3	H3	175.6	173.5
C3	C4	C5	O4	112.1	120.0
C3	C4	C5	H4	234.8	240.2
O4	C4	C5	H4	122.7	120.2
C5	C4	O4	HO4	292.4	300.0
C6	C5	C4	O5	240.9	239.8
C6	C5	C4	H5	117.5	119.8
C4	C5	C6	O6	64.5	180.3
C4	C5	C6	H61	189.8	300.3
C4	C5	C6	H62	299.2	60.3
O5	C5	C4	H5	236.6	239.9
O4	C4	C3	O3	51.2	53.7
O4	C4	C3	H3	291.6	293.4
C3	C4	O4	C5	247.7	240.3
C3	C4	O4	H4	125.1	120.1
C5	C4	O4	H4	237.5	239.8
O4	C4	C5	C6	59.4	58.7
O4	C4	C5	O5	178.5	178.8
O4	C4	C5	H5	301.8	298.9
H4	C4	C3	O3	173.2	174.0
H4	C4	C3	H3	53.7	53.7
C3	C4	H4	C5	118.9	119.5
C3	C4	H4	O4	241.3	239.8
C5	C4	H4	O4	122.4	120.2
H4	C4	C5	C6	296.7	298.5
H4	C4	C5	O5	55.8	58.6
H4	C4	C5	H5	179.2	178.7
H4	C4	O4	HO4	54.9	60.2
C1	O5	C5	C6	200.4	187.7
C6	C5	C4	O4	59.4	58.7
C6	C5	C4	H4	296.7	298.5
C4	C5	C6	O5	120.9	120.4
C4	C5	C6	H5	244.4	240.1
O5	C5	C6	H5	123.5	119.7
O6	C6	C5	H61	234.7	240.0
O6	C6	C5	H62	125.3	120.0
C5	C6	O6	HO6	180.0	180.1
H61	C6	C5	H62	250.6	240.0
C5	O5	C1	H1	53.8	52.5
O5	C5	C4	O4	178.5	178.8
O5	C5	C4	H4	55.8	58.6
C4	C5	O5	C6	233.9	239.9
C4	C5	O5	H5	115.9	120.1
C6	C5	O5	H5	242.0	240.3
O5	C5	C6	O6	303.6	59.9
O5	C5	C6	H61	68.9	179.9
O5	C5	C6	H62	178.3	299.9
H5	C5	C4	O4	301.8	298.9
H5	C5	C4	H4	179.2	178.7
C4	C5	H5	C6	124.2	119.8
C4	C5	H5	O5	241.2	239.6
C6	C5	H5	O5	117.0	119.8
H5	C5	C6	O6	180.1	300.2
H5	C5	C6	H61	305.4	60.2
H5	C5	C6	H62	54.8	180.2
O6	C6	C5	O5	303.6	59.9
O6	C6	C5	H5	180.1	300.2
C5	C6	O6	H61	125.3	120.1
C5	C6	O6	H62	234.7	240.0
H61	C6	O6	H62	109.4	119.9
H61	C6	C5	O5	68.9	179.9
H61	C6	C5	H5	305.4	60.2
C5	C6	H61	O6	236.1	239.9
C5	C6	H61	H62	118.0	120.0
O6	C6	H61	H62	241.9	240.1
H61	C6	O6	HO6	54.7	60.0
H62	C6	C5	O5	178.3	299.9
H62	C6	C5	H5	54.8	180.2
C5	C6	H62	O6	123.9	120.0
C5	C6	H62	H61	242.0	240.0
O6	C6	H62	H61	118.1	119.9
H62	C6	O6	HO6	305.3	300.1
C2	N2	C7	C8	1.5	180.0
N2	C7	C8	O7	180.2	180.0
C8	C7	N2	HN2	181.5	360.0
H81	C8	C7	H82	234.7	240.0
H81	C8	C7	H83	125.2	120.0
H82	C8	C7	H83	250.6	240.0
C7	N2	C2	H2	20.5	330.0
C2	N2	C7	HN2	180.0	180.0
C8	C7	N2	O7	179.7	180.0
N2	C7	C8	H81	180.0	180.0
N2	C7	C8	H82	305.3	300.0
N2	C7	C8	H83	54.7	60.0
C8	C7	O7	N2	180.3	180.0
O7	C7	C8	H81	359.7	360.0
O7	C7	C8	H82	125.1	120.0
O7	C7	C8	H83	234.5	240.0
O7	C7	N2	HN2	1.8	180.0
H81	C8	C7	N2	180.0	180.0
H81	C8	C7	O7	359.7	360.0
C7	C8	H81	H82	125.3	120.0
C7	C8	H81	H83	234.8	240.0
H82	C8	H81	H83	109.5	120.0
H82	C8	C7	N2	305.3	300.0
H82	C8	C7	O7	125.1	120.0
C7	C8	H82	H81	230.3	240.0
C7	C8	H82	H83	115.1	120.0
H81	C8	H82	H83	244.8	240.0
H83	C8	C7	N2	54.7	60.0
H83	C8	C7	O7	234.5	240.0
C7	C8	H83	H81	129.7	120.0
C7	C8	H83	H82	244.9	240.0
H81	C8	H83	H82	115.2	120.0
HN2	N2	C2	H2	200.4	150.0
C2	N2	HN2	C7	180.0	180.0
HN2	N2	C7	O7	1.8	180.0
HO1	O1	C1	O5	297.7	300.3
HO1	O1	C1	H1	59.5	60.2
HO3	O3	C3	H3	60.8	60.2
HO4	O4	C4	H4	54.9	60.2
HO6	O6	C6	H61	54.7	60.0
HO6	O6	C6	H62	305.3	300.1