PDB Chemical Component NA3
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for NA3
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C7 |
C8 |
1.407 |
1.385 |
C7 |
C6 |
1.411 |
1.399 |
C7 |
H7 |
1.103 |
1.080 |
C8 |
C9 |
1.384 |
1.385 |
C8 |
BR1 |
1.916 |
1.891 |
C9 |
N2 |
1.325 |
1.320 |
C9 |
H9 |
1.103 |
1.080 |
N2 |
C10 |
1.359 |
1.317 |
C10 |
C6 |
1.393 |
1.395 |
C10 |
H10 |
1.103 |
1.080 |
C6 |
C5 |
1.495 |
1.479 |
C5 |
O4 |
1.239 |
1.215 |
C5 |
N1 |
1.334 |
1.348 |
N1 |
C3 |
1.464 |
1.465 |
N1 |
HN1 |
1.020 |
0.970 |
C3 |
C2 |
1.514 |
1.530 |
C3 |
C4 |
1.520 |
1.507 |
C3 |
H3 |
1.115 |
1.090 |
C2 |
C1 |
1.487 |
1.507 |
C2 |
H21 |
1.115 |
1.090 |
C2 |
H22 |
1.115 |
1.090 |
C4 |
O3 |
1.245 |
1.208 |
C4 |
H4 |
1.103 |
1.080 |
C1 |
O2 |
1.239 |
1.342 |
C1 |
O1 |
1.244 |
1.209 |
O2 |
HO2 |
0.950 |
0.967 |
Bond Angles for NA3
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C8 |
C7 |
C6 |
118.2 |
118.3 |
C8 |
C7 |
H7 |
120.8 |
120.8 |
C7 |
C8 |
C9 |
119.7 |
119.3 |
C7 |
C8 |
BR1 |
122.4 |
120.4 |
C6 |
C7 |
H7 |
121.0 |
120.9 |
C7 |
C6 |
C10 |
117.3 |
118.9 |
C7 |
C6 |
C5 |
122.4 |
120.5 |
C9 |
C8 |
BR1 |
117.9 |
120.3 |
C8 |
C9 |
N2 |
122.9 |
121.0 |
C8 |
C9 |
H9 |
120.8 |
119.5 |
N2 |
C9 |
H9 |
116.3 |
119.5 |
C9 |
N2 |
C10 |
117.9 |
121.9 |
N2 |
C10 |
C6 |
124.1 |
120.6 |
N2 |
C10 |
H10 |
116.6 |
119.7 |
C6 |
C10 |
H10 |
119.3 |
119.7 |
C10 |
C6 |
C5 |
120.2 |
120.5 |
C6 |
C5 |
O4 |
123.7 |
120.0 |
C6 |
C5 |
N1 |
112.3 |
120.0 |
O4 |
C5 |
N1 |
123.9 |
120.0 |
C5 |
N1 |
C3 |
124.5 |
120.0 |
C5 |
N1 |
HN1 |
112.7 |
120.0 |
C3 |
N1 |
HN1 |
122.8 |
120.0 |
N1 |
C3 |
C2 |
111.8 |
109.4 |
N1 |
C3 |
C4 |
129.5 |
109.5 |
N1 |
C3 |
H3 |
89.2 |
109.4 |
C2 |
C3 |
C4 |
111.0 |
109.5 |
C2 |
C3 |
H3 |
121.5 |
109.4 |
C3 |
C2 |
C1 |
112.6 |
109.5 |
C3 |
C2 |
H21 |
111.1 |
109.5 |
C3 |
C2 |
H22 |
111.1 |
109.5 |
C4 |
C3 |
H3 |
90.6 |
109.5 |
C3 |
C4 |
O3 |
118.9 |
120.0 |
C3 |
C4 |
H4 |
130.1 |
120.0 |
C1 |
C2 |
H21 |
111.1 |
109.4 |
C1 |
C2 |
H22 |
111.1 |
109.5 |
C2 |
C1 |
O2 |
117.2 |
120.0 |
C2 |
C1 |
O1 |
117.5 |
120.0 |
H21 |
C2 |
H22 |
99.2 |
109.5 |
O3 |
C4 |
H4 |
111.0 |
120.0 |
O2 |
C1 |
O1 |
125.2 |
120.0 |
C1 |
O2 |
HO2 |
117.2 |
120.0 |
Torsion Angles for NA3
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C7 |
C8 |
H7 |
180.0 |
180.5 |
C8 |
C7 |
C6 |
C10 |
360.0 |
359.5 |
C8 |
C7 |
C6 |
C5 |
184.8 |
179.7 |
C9 |
C8 |
C7 |
BR1 |
179.1 |
180.3 |
C7 |
C8 |
C9 |
N2 |
359.4 |
359.7 |
C7 |
C8 |
C9 |
H9 |
179.3 |
179.8 |
C8 |
C7 |
C6 |
H7 |
180.0 |
179.5 |
C6 |
C7 |
C8 |
C9 |
0.4 |
0.5 |
C6 |
C7 |
C8 |
BR1 |
181.3 |
180.2 |
N2 |
C10 |
C6 |
C7 |
359.9 |
0.3 |
C7 |
C6 |
C10 |
H10 |
179.8 |
180.2 |
C10 |
C6 |
C7 |
C5 |
175.2 |
179.7 |
C7 |
C6 |
C5 |
O4 |
4.1 |
359.7 |
C7 |
C6 |
C5 |
N1 |
186.0 |
179.7 |
C8 |
C7 |
H7 |
C6 |
180.0 |
180.6 |
H7 |
C7 |
C8 |
C9 |
180.4 |
180.0 |
H7 |
C7 |
C8 |
BR1 |
1.3 |
359.7 |
H7 |
C7 |
C6 |
C10 |
180.0 |
180.0 |
H7 |
C7 |
C6 |
C5 |
4.8 |
0.3 |
C9 |
C8 |
C7 |
C6 |
0.4 |
0.5 |
C9 |
C8 |
C7 |
H7 |
180.4 |
180.0 |
C7 |
C8 |
C9 |
BR1 |
180.9 |
179.7 |
N2 |
C9 |
C8 |
H9 |
180.0 |
179.9 |
C8 |
C9 |
N2 |
C10 |
0.5 |
0.1 |
BR1 |
C8 |
C7 |
C6 |
181.3 |
180.2 |
BR1 |
C8 |
C7 |
H7 |
1.3 |
359.7 |
C7 |
C8 |
BR1 |
C9 |
179.1 |
180.3 |
BR1 |
C8 |
C9 |
N2 |
178.5 |
180.0 |
BR1 |
C8 |
C9 |
H9 |
358.5 |
0.1 |
N2 |
C9 |
C8 |
BR1 |
178.5 |
180.0 |
C8 |
C9 |
N2 |
H9 |
180.0 |
180.1 |
C9 |
N2 |
C10 |
C6 |
359.9 |
359.9 |
C9 |
N2 |
C10 |
H10 |
179.9 |
180.0 |
H9 |
C9 |
C8 |
BR1 |
358.5 |
0.1 |
C8 |
C9 |
H9 |
N2 |
180.0 |
179.9 |
H9 |
C9 |
N2 |
C10 |
180.5 |
180.0 |
C7 |
C6 |
C10 |
N2 |
359.9 |
0.3 |
C10 |
N2 |
C9 |
H9 |
180.5 |
180.0 |
C6 |
C10 |
N2 |
H10 |
180.0 |
179.9 |
N2 |
C10 |
C6 |
C5 |
175.2 |
180.1 |
C10 |
C6 |
C7 |
H7 |
180.0 |
180.0 |
C7 |
C6 |
C10 |
C5 |
184.7 |
180.3 |
N2 |
C10 |
C6 |
H10 |
180.0 |
180.1 |
C10 |
C6 |
C5 |
O4 |
189.0 |
180.0 |
C10 |
C6 |
C5 |
N1 |
10.9 |
360.0 |
N2 |
C10 |
H10 |
C6 |
180.0 |
179.9 |
H10 |
C10 |
C6 |
C5 |
355.1 |
360.0 |
C5 |
C6 |
C7 |
H7 |
4.8 |
0.3 |
C7 |
C6 |
C5 |
C10 |
175.1 |
179.7 |
C5 |
C6 |
C10 |
H10 |
355.1 |
360.0 |
O4 |
C5 |
C6 |
N1 |
178.1 |
180.0 |
C6 |
C5 |
N1 |
C3 |
183.5 |
180.0 |
C6 |
C5 |
N1 |
HN1 |
3.5 |
0.1 |
C6 |
C5 |
O4 |
N1 |
182.2 |
180.0 |
O4 |
C5 |
N1 |
C3 |
5.4 |
359.9 |
O4 |
C5 |
N1 |
HN1 |
185.4 |
180.0 |
C6 |
C5 |
N1 |
O4 |
178.1 |
180.0 |
C3 |
N1 |
C5 |
HN1 |
180.0 |
179.9 |
C5 |
N1 |
C3 |
C2 |
140.5 |
155.0 |
C5 |
N1 |
C3 |
C4 |
286.6 |
275.1 |
C5 |
N1 |
C3 |
H3 |
16.7 |
35.1 |
C5 |
N1 |
C3 |
HN1 |
180.0 |
180.1 |
C2 |
C3 |
N1 |
C4 |
213.9 |
240.0 |
C2 |
C3 |
N1 |
H3 |
123.8 |
119.9 |
N1 |
C3 |
C2 |
C1 |
299.0 |
295.0 |
N1 |
C3 |
C2 |
H21 |
173.7 |
175.1 |
N1 |
C3 |
C2 |
H22 |
64.2 |
55.1 |
C4 |
C3 |
N1 |
H3 |
269.9 |
240.0 |
N1 |
C3 |
C4 |
O3 |
48.6 |
360.0 |
N1 |
C3 |
C4 |
H4 |
228.6 |
180.0 |
C5 |
N1 |
HN1 |
C3 |
180.0 |
179.9 |
HN1 |
N1 |
C3 |
C2 |
320.5 |
334.9 |
HN1 |
N1 |
C3 |
C4 |
106.6 |
95.0 |
HN1 |
N1 |
C3 |
H3 |
196.7 |
215.0 |
C2 |
C3 |
N1 |
HN1 |
320.5 |
334.9 |
N1 |
C3 |
C2 |
C4 |
152.5 |
120.1 |
N1 |
C3 |
C2 |
H3 |
256.9 |
240.1 |
C4 |
C3 |
C2 |
H3 |
104.3 |
120.0 |
C2 |
C3 |
C4 |
O3 |
194.9 |
120.0 |
C2 |
C3 |
C4 |
H4 |
14.8 |
300.0 |
C1 |
C2 |
C3 |
H21 |
125.3 |
120.0 |
C1 |
C2 |
C3 |
H22 |
234.7 |
240.0 |
C3 |
C2 |
C1 |
O2 |
160.7 |
179.9 |
C3 |
C2 |
C1 |
O1 |
339.2 |
0.0 |
H21 |
C2 |
C3 |
H22 |
109.5 |
120.0 |
C4 |
C3 |
N1 |
HN1 |
106.6 |
95.0 |
N1 |
C3 |
C4 |
C2 |
213.7 |
240.0 |
N1 |
C3 |
C4 |
H3 |
89.5 |
120.0 |
C2 |
C3 |
C4 |
H3 |
235.7 |
240.0 |
C4 |
C3 |
C2 |
C1 |
146.4 |
174.9 |
C4 |
C3 |
C2 |
H21 |
21.2 |
55.0 |
C4 |
C3 |
C2 |
H22 |
271.7 |
295.0 |
O3 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
H3 |
C3 |
N1 |
HN1 |
196.7 |
215.0 |
N1 |
C3 |
H3 |
C2 |
115.2 |
119.9 |
N1 |
C3 |
H3 |
C4 |
230.5 |
239.9 |
C2 |
C3 |
H3 |
C4 |
115.3 |
120.0 |
H3 |
C3 |
C2 |
C1 |
42.1 |
54.9 |
H3 |
C3 |
C2 |
H21 |
276.8 |
295.0 |
H3 |
C3 |
C2 |
H22 |
167.4 |
175.0 |
H3 |
C3 |
C4 |
O3 |
319.1 |
240.0 |
H3 |
C3 |
C4 |
H4 |
139.1 |
60.0 |
C1 |
C2 |
C3 |
C4 |
146.4 |
174.9 |
C1 |
C2 |
C3 |
H3 |
42.1 |
54.9 |
C3 |
C2 |
C1 |
H21 |
234.7 |
240.0 |
C3 |
C2 |
C1 |
H22 |
125.3 |
120.0 |
H21 |
C2 |
C1 |
H22 |
250.6 |
240.0 |
O2 |
C1 |
C2 |
O1 |
181.5 |
179.9 |
C2 |
C1 |
O2 |
HO2 |
180.0 |
180.0 |
H21 |
C2 |
C3 |
C4 |
21.2 |
55.0 |
H21 |
C2 |
C3 |
H3 |
276.8 |
295.0 |
C3 |
C2 |
H21 |
C1 |
126.1 |
120.0 |
C3 |
C2 |
H21 |
H22 |
243.0 |
240.0 |
C1 |
C2 |
H21 |
H22 |
116.9 |
120.0 |
H21 |
C2 |
C1 |
O2 |
286.0 |
299.9 |
H21 |
C2 |
C1 |
O1 |
104.5 |
120.0 |
H22 |
C2 |
C3 |
C4 |
271.7 |
295.0 |
H22 |
C2 |
C3 |
H3 |
167.4 |
175.0 |
C3 |
C2 |
H22 |
C1 |
233.9 |
240.0 |
C3 |
C2 |
H22 |
H21 |
117.0 |
120.0 |
C1 |
C2 |
H22 |
H21 |
243.1 |
240.0 |
H22 |
C2 |
C1 |
O2 |
35.4 |
59.9 |
H22 |
C2 |
C1 |
O1 |
213.9 |
240.0 |
O3 |
C4 |
C3 |
H3 |
319.1 |
240.0 |
C3 |
C4 |
O3 |
H4 |
180.0 |
180.0 |
H4 |
C4 |
C3 |
H3 |
139.1 |
60.0 |
C3 |
C4 |
H4 |
O3 |
180.0 |
180.0 |
O2 |
C1 |
C2 |
H21 |
286.0 |
299.9 |
O2 |
C1 |
C2 |
H22 |
35.4 |
59.9 |
C2 |
C1 |
O2 |
O1 |
178.3 |
180.1 |
O1 |
C1 |
C2 |
H21 |
104.5 |
120.0 |
O1 |
C1 |
C2 |
H22 |
213.9 |
240.0 |
C2 |
C1 |
O1 |
O2 |
181.7 |
179.9 |
O1 |
C1 |
O2 |
HO2 |
1.7 |
359.9 |
HO2 |
O2 |
C1 |
O1 |
1.7 |
359.9 |