PDB Chemical Component N4B

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for N4B

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.412 1.382
C1 C6 1.364 1.382
C1 C1' 1.504 1.506
C2 C3 1.373 1.382
C2 H2 1.102 1.080
C3 C4 1.387 1.382
C3 H3 1.103 1.081
C4 C5 1.365 1.382
C4 H4 1.103 1.080
C5 C6 1.380 1.382
C5 H5 1.104 1.080
C6 H6 1.103 1.080
C1' C2' 1.526 1.529
C1' H1'1 1.114 1.090
C1' H1'2 1.116 1.090
C2' C3' 1.519 1.530
C2' H2'1 1.115 1.089
C2' H2'2 1.114 1.090
C3' C4' 1.500 1.529
C3' H3'1 1.116 1.089
C3' H3'2 1.115 1.091
C4' H4'1 1.115 1.091
C4' H4'2 1.114 1.090
C4' H4'3 1.115 1.089

Bond Angles for N4B

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 119.4 120.0
C2 C1 C1' 121.8 120.0
C1 C2 C3 120.0 120.0
C1 C2 H2 121.4 120.0
C6 C1 C1' 118.7 120.0
C1 C6 C5 120.1 120.0
C1 C6 H6 119.4 120.0
C1 C1' C2' 109.2 109.5
C1 C1' H1'1 112.3 109.5
C1 C1' H1'2 112.3 109.5
C3 C2 H2 118.6 120.0
C2 C3 C4 119.6 120.0
C2 C3 H3 119.7 120.0
C4 C3 H3 120.6 119.9
C3 C4 C5 120.0 120.0
C3 C4 H4 120.8 120.0
C5 C4 H4 119.2 120.0
C4 C5 C6 120.9 120.0
C4 C5 H5 119.0 120.0
C6 C5 H5 120.1 120.0
C5 C6 H6 120.5 120.0
C2' C1' H1'1 112.4 109.5
C2' C1' H1'2 112.3 109.4
C1' C2' C3' 112.0 109.5
C1' C2' H2'1 111.3 109.5
C1' C2' H2'2 111.3 109.5
H1'1 C1' H1'2 98.1 109.4
C3' C2' H2'1 111.3 109.5
C3' C2' H2'2 111.3 109.4
C2' C3' C4' 112.8 109.6
C2' C3' H3'1 111.1 109.6
C2' C3' H3'2 111.1 109.4
H2'1 C2' H2'2 99.1 109.5
C4' C3' H3'1 111.0 109.5
C4' C3' H3'2 111.0 109.4
C3' C4' H4'1 112.7 109.5
C3' C4' H4'2 111.0 109.4
C3' C4' H4'3 111.0 109.5
H3'1 C3' H3'2 99.3 109.4
H4'1 C4' H4'2 111.1 109.4
H4'1 C4' H4'3 110.9 109.5
H4'2 C4' H4'3 99.3 109.5

Torsion Angles for N4B

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 C1' 183.4 180.2
C2 C1 C6 C5 0.7 359.6
C2 C1 C6 H6 180.7 180.0
C2 C1 C1' C2' 285.3 90.0
C2 C1 C1' H1'1 50.7 330.0
C2 C1 C1' H1'2 160.1 210.0
C3 C2 C1 H2 180.0 179.9
C1 C2 C3 C4 359.1 0.0
C1 C2 C3 H3 179.1 180.0
C2 C1 C6 C1' 176.7 179.8
C6 C1 C2 C3 359.5 0.2
C6 C1 C2 H2 179.5 180.3
C6 C1 C1' C2' 102.0 269.8
C6 C1 C1' H1'1 227.3 149.8
C6 C1 C1' H1'2 336.7 29.7
C4 C5 C6 C1 0.5 0.4
C1 C6 C5 H5 180.5 180.3
C5 C6 C1 H6 180.0 179.6
C2 C1 C1' C6 183.4 180.2
C1' C1 C2 C3 176.1 180.0
C1' C1 C2 H2 356.1 0.1
C1' C1 C6 C5 184.0 179.9
C1' C1 C6 H6 4.0 0.2
C2' C1' C1 H1'1 234.7 120.0
C2' C1' C1 H1'2 125.2 240.0
C1 C1' C2' C3' 284.4 180.0
C1 C1' C2' H2'1 49.6 60.0
C1 C1' C2' H2'2 159.1 300.0
H1'1 C1' C1 H1'2 250.6 120.0
C3 C2 C1 C6 359.5 0.2
C3 C2 C1 C1' 176.1 180.0
C1 C2 C3 H2 180.0 180.1
C4 C3 C2 H3 180.0 180.0
C2 C3 C4 C5 2.1 360.0
C2 C3 C4 H4 182.1 179.9
H2 C2 C1 C6 179.5 180.3
H2 C2 C1 C1' 356.1 0.1
C1 C2 H2 C3 180.0 179.9
H2 C2 C3 C4 179.1 179.9
H2 C2 C3 H3 359.1 359.9
C4 C3 C2 H2 179.1 179.9
C2 C3 C4 H3 180.0 180.0
C5 C4 C3 H4 180.0 180.1
C3 C4 C5 C6 358.1 359.8
C3 C4 C5 H5 178.1 179.9
H3 C3 C2 H2 359.1 359.9
C2 C3 H3 C4 180.0 180.0
H3 C3 C4 C5 182.1 180.0
H3 C3 C4 H4 2.1 359.9
C1 C6 C5 C4 0.5 0.4
C5 C4 C3 H3 182.1 180.0
C3 C4 C5 H4 180.0 179.9
C6 C5 C4 H5 180.0 179.9
C4 C5 C6 H6 180.5 180.0
H4 C4 C3 H3 2.1 359.9
C3 C4 H4 C5 180.0 180.1
H4 C4 C5 C6 178.0 179.9
H4 C4 C5 H5 358.1 0.0
C5 C6 C1 C1' 184.0 179.9
C1 C6 C5 H6 180.0 180.4
C6 C5 C4 H4 178.0 179.9
C4 C5 C6 H5 180.0 180.1
H5 C5 C4 H4 358.1 0.0
C4 C5 H5 C6 180.0 179.9
H5 C5 C6 H6 0.5 359.9
H6 C6 C1 C1' 4.0 0.2
C1 C6 H6 C5 180.0 179.6
H6 C6 C5 H5 0.5 359.9
C1 C1' C2' H1'1 125.3 239.9
C1 C1' C2' H1'2 234.8 120.0
H1'1 C1' C2' H1'2 109.5 240.1
C3' C2' C1' H2'1 234.8 120.1
C3' C2' C1' H2'2 125.3 240.1
C1' C2' C3' C4' 295.1 180.0
C1' C2' C3' H3'1 60.3 59.9
C1' C2' C3' H3'2 169.8 299.9
H2'1 C2' C1' H2'2 250.5 120.0
C1 C1' H1'1 C2' 236.4 120.0
C1 C1' H1'1 H1'2 118.2 239.9
C2' C1' H1'1 H1'2 241.8 119.9
H1'1 C1' C2' C3' 159.1 300.1
H1'1 C1' C2' H2'1 284.3 180.0
H1'1 C1' C2' H2'2 33.8 60.0
C1 C1' H1'2 C2' 123.5 240.0
C1 C1' H1'2 H1'1 241.8 120.1
C2' C1' H1'2 H1'1 118.3 240.1
H1'2 C1' C2' C3' 49.6 60.0
H1'2 C1' C2' H2'1 174.8 300.0
H1'2 C1' C2' H2'2 284.3 180.0
C3' C2' C1' H1'1 159.1 300.1
C3' C2' C1' H1'2 49.6 60.0
C1' C2' C3' H2'1 125.2 239.9
C1' C2' C3' H2'2 234.7 120.0
H2'1 C2' C3' H2'2 109.5 240.1
C4' C3' C2' H3'1 234.7 120.2
C4' C3' C2' H3'2 125.3 240.1
C2' C3' C4' H4'1 179.9 179.9
C2' C3' C4' H4'2 305.3 299.9
C2' C3' C4' H4'3 54.8 59.9
H3'1 C3' C2' H3'2 250.6 119.9
H2'1 C2' C1' H1'1 284.3 180.0
H2'1 C2' C1' H1'2 174.8 300.0
C1' C2' H2'1 C3' 234.4 120.1
C1' C2' H2'1 H2'2 117.2 240.0
C3' C2' H2'1 H2'2 242.8 119.9
H2'1 C2' C3' C4' 169.8 300.1
H2'1 C2' C3' H3'1 295.1 179.9
H2'1 C2' C3' H3'2 44.5 60.0
H2'2 C2' C1' H1'1 33.8 60.0
H2'2 C2' C1' H1'2 284.3 180.0
C1' C2' H2'2 C3' 125.6 240.0
C1' C2' H2'2 H2'1 242.8 120.0
C3' C2' H2'2 H2'1 117.2 240.0
H2'2 C2' C3' C4' 60.3 60.1
H2'2 C2' C3' H3'1 185.6 299.9
H2'2 C2' C3' H3'2 295.0 180.0
C4' C3' C2' H2'1 169.8 300.1
C4' C3' C2' H2'2 60.3 60.1
C2' C3' C4' H3'1 125.3 239.8
C2' C3' C4' H3'2 234.7 119.9
H3'1 C3' C4' H3'2 109.4 240.1
H4'1 C4' C3' H4'2 234.7 240.0
H4'1 C4' C3' H4'3 125.2 120.1
H4'2 C4' C3' H4'3 250.5 240.0
H3'1 C3' C2' H2'1 295.1 179.9
H3'1 C3' C2' H2'2 185.6 299.9
C2' C3' H3'1 C4' 233.7 120.2
C2' C3' H3'1 H3'2 116.9 240.0
C4' C3' H3'1 H3'2 243.2 119.9
H3'1 C3' C4' H4'1 54.6 300.1
H3'1 C3' C4' H4'2 180.0 60.1
H3'1 C3' C4' H4'3 289.5 180.1
H3'2 C3' C2' H2'1 44.5 60.0
H3'2 C3' C2' H2'2 295.0 180.0
C2' C3' H3'2 C4' 126.3 240.0
C2' C3' H3'2 H3'1 243.1 120.0
C4' C3' H3'2 H3'1 116.8 240.0
H3'2 C3' C4' H4'1 305.3 60.0
H3'2 C3' C4' H4'2 70.6 180.0
H3'2 C3' C4' H4'3 180.1 299.9
H4'1 C4' C3' H3'1 54.6 300.1
H4'1 C4' C3' H3'2 305.3 60.0
C3' C4' H4'1 H4'2 125.3 119.9
C3' C4' H4'1 H4'3 234.8 239.9
H4'2 C4' H4'1 H4'3 109.5 119.9
H4'2 C4' C3' H3'1 180.0 60.1
H4'2 C4' C3' H3'2 70.6 180.0
C3' C4' H4'2 H4'1 233.7 240.0
C3' C4' H4'2 H4'3 116.9 120.0
H4'1 C4' H4'2 H4'3 243.2 240.1
H4'3 C4' C3' H3'1 289.5 180.1
H4'3 C4' C3' H3'2 180.1 299.9
C3' C4' H4'3 H4'1 126.2 120.1
C3' C4' H4'3 H4'2 243.1 240.1
H4'1 C4' H4'3 H4'2 116.9 119.9