PDB Chemical Component N45
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for N45
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N6 |
C6 |
1.381 |
1.386 |
| C5 |
C6 |
1.420 |
1.391 |
| C5 |
C3 |
1.425 |
1.392 |
| C6 |
N3 |
1.382 |
1.333 |
| O1 |
C1 |
1.269 |
1.219 |
| C13 |
C16 |
1.556 |
1.530 |
| C13 |
C12 |
1.545 |
1.530 |
| C16 |
C15 |
1.547 |
1.530 |
| C12 |
C11 |
1.547 |
1.529 |
| N1 |
C3 |
1.380 |
1.387 |
| N1 |
C2 |
1.378 |
1.392 |
| C3 |
N2 |
1.383 |
1.332 |
| N3 |
C4 |
1.372 |
1.317 |
| C1 |
C2 |
1.530 |
1.466 |
| C1 |
N4 |
1.352 |
1.347 |
| C2 |
C7 |
1.404 |
1.379 |
| C4 |
N2 |
1.360 |
1.317 |
| C15 |
C14 |
1.546 |
1.530 |
| C11 |
C14 |
1.553 |
1.529 |
| C11 |
N4 |
1.476 |
1.467 |
| C11 |
N5 |
1.492 |
1.464 |
| N4 |
C9 |
1.338 |
1.374 |
| C7 |
C8 |
1.394 |
1.398 |
| N5 |
C10 |
1.351 |
1.346 |
| C9 |
C8 |
1.477 |
1.366 |
| C9 |
C10 |
1.489 |
1.475 |
| C8 |
C17 |
1.515 |
1.508 |
| C10 |
O2 |
1.303 |
1.216 |
| C14 |
H1 |
1.100 |
1.089 |
| C14 |
H2 |
1.100 |
1.091 |
| C15 |
H3 |
1.100 |
1.090 |
| C15 |
H4 |
1.100 |
1.090 |
| C16 |
H5 |
1.100 |
1.089 |
| C16 |
H6 |
1.100 |
1.090 |
| C13 |
H7 |
1.100 |
1.090 |
| C13 |
H8 |
1.100 |
1.090 |
| C12 |
H9 |
1.100 |
1.090 |
| C12 |
H10 |
1.100 |
1.090 |
| N5 |
H11 |
1.000 |
0.971 |
| C17 |
H12 |
1.100 |
1.090 |
| C17 |
H13 |
1.100 |
1.089 |
| C17 |
H14 |
1.100 |
1.090 |
| C7 |
H15 |
1.080 |
1.080 |
| N1 |
H16 |
1.000 |
0.970 |
| C5 |
H17 |
1.080 |
1.080 |
| N6 |
H18 |
1.000 |
0.970 |
| N6 |
H19 |
1.000 |
0.970 |
| C4 |
H20 |
1.080 |
1.080 |
Bond Angles for N45
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N6 |
C6 |
N3 |
121.6 |
120.5 |
| C5 |
C6 |
N3 |
118.3 |
119.0 |
| C6 |
C5 |
H17 |
120.0 |
120.9 |
| C5 |
C3 |
N2 |
118.9 |
119.0 |
| C6 |
N3 |
C4 |
120.4 |
120.9 |
| C13 |
C16 |
H5 |
108.5 |
109.5 |
| C13 |
C16 |
H6 |
108.5 |
109.5 |
| C12 |
C13 |
H7 |
108.4 |
109.4 |
| C12 |
C13 |
H8 |
108.4 |
109.5 |
| C13 |
C12 |
H9 |
108.7 |
109.5 |
| C13 |
C12 |
H10 |
108.7 |
109.4 |
| C16 |
C15 |
H3 |
108.6 |
109.4 |
| C16 |
C15 |
H4 |
108.6 |
109.5 |
| C12 |
C11 |
N5 |
109.5 |
110.3 |
| N1 |
C3 |
N2 |
124.0 |
120.5 |
| C3 |
N1 |
H16 |
117.1 |
120.0 |
| C3 |
N2 |
C4 |
119.9 |
120.9 |
| N3 |
C4 |
N2 |
122.5 |
121.9 |
| N3 |
C4 |
H20 |
118.7 |
119.0 |
| C2 |
C7 |
H15 |
120.3 |
120.3 |
| N2 |
C4 |
H20 |
118.8 |
119.0 |
| C15 |
C14 |
H1 |
109.0 |
109.5 |
| C15 |
C14 |
H2 |
109.1 |
109.4 |
| C14 |
C11 |
N5 |
110.1 |
109.9 |
| C11 |
C14 |
H1 |
109.0 |
109.5 |
| C11 |
C14 |
H2 |
109.0 |
109.4 |
| C11 |
N5 |
H11 |
126.2 |
126.0 |
| N4 |
C9 |
C8 |
122.2 |
120.7 |
| C9 |
C8 |
C17 |
118.8 |
119.6 |
| C8 |
C17 |
H12 |
109.5 |
109.5 |
| C8 |
C17 |
H13 |
109.5 |
109.5 |
| C8 |
C17 |
H14 |
109.5 |
109.4 |
| H1 |
C14 |
H2 |
109.5 |
109.5 |
| H3 |
C15 |
H4 |
109.5 |
109.5 |
| H5 |
C16 |
H6 |
109.5 |
109.5 |
| H7 |
C13 |
H8 |
109.4 |
109.4 |
| H9 |
C12 |
H10 |
109.5 |
109.5 |
| H12 |
C17 |
H13 |
109.5 |
109.5 |
| H12 |
C17 |
H14 |
109.5 |
109.4 |
| H13 |
C17 |
H14 |
109.4 |
109.5 |
| H18 |
N6 |
H19 |
109.5 |
120.0 |
Torsion Angles for N45
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C5 |
C6 |
N6 |
N3 |
179.9 |
179.9 |
| N6 |
C6 |
C5 |
H17 |
0.4 |
0.0 |
| N6 |
C6 |
N3 |
C4 |
179.5 |
180.0 |
| N6 |
C6 |
C5 |
N3 |
180.1 |
180.1 |
| C6 |
C5 |
C3 |
N2 |
0.2 |
0.2 |
| C5 |
C6 |
N3 |
C4 |
359.6 |
0.0 |
| N1 |
C3 |
C5 |
N2 |
182.1 |
179.7 |
| C5 |
C3 |
N1 |
H16 |
11.6 |
173.9 |
| C5 |
C3 |
N2 |
C4 |
359.4 |
359.5 |
| N3 |
C6 |
C5 |
H17 |
180.3 |
180.0 |
| C6 |
N3 |
C4 |
N2 |
360.0 |
359.7 |
| C6 |
N3 |
C4 |
H20 |
179.9 |
180.0 |
| C13 |
C16 |
C15 |
H3 |
70.7 |
179.7 |
| C13 |
C16 |
C15 |
H4 |
189.7 |
59.7 |
| H5 |
C16 |
C13 |
H6 |
241.1 |
120.1 |
| C12 |
C13 |
C16 |
H5 |
167.6 |
300.3 |
| C12 |
C13 |
C16 |
H6 |
286.5 |
180.2 |
| C13 |
C12 |
C11 |
N5 |
289.4 |
298.0 |
| H7 |
C13 |
C12 |
H8 |
118.7 |
120.0 |
| H9 |
C12 |
C13 |
H10 |
240.9 |
120.0 |
| C16 |
C15 |
C14 |
H1 |
173.6 |
299.7 |
| C16 |
C15 |
C14 |
H2 |
293.2 |
179.7 |
| H3 |
C15 |
C16 |
H4 |
241.0 |
120.0 |
| C14 |
C11 |
C12 |
N5 |
122.8 |
121.3 |
| C12 |
C11 |
C14 |
H1 |
185.1 |
60.6 |
| C12 |
C11 |
C14 |
H2 |
65.6 |
180.7 |
| C12 |
C11 |
N5 |
H11 |
61.1 |
60.7 |
| C5 |
C3 |
N1 |
N2 |
177.8 |
180.3 |
| N1 |
C3 |
N2 |
C4 |
177.1 |
179.8 |
| N1 |
C2 |
C7 |
H15 |
2.5 |
0.0 |
| N2 |
C3 |
N1 |
H16 |
193.7 |
353.6 |
| N3 |
C4 |
N2 |
C3 |
0.6 |
0.5 |
| C3 |
N2 |
C4 |
H20 |
180.6 |
180.3 |
| C3 |
N2 |
C4 |
N3 |
0.6 |
0.5 |
| N2 |
C4 |
N3 |
H20 |
180.0 |
179.7 |
| C1 |
C2 |
C7 |
H15 |
180.2 |
180.0 |
| N3 |
C4 |
N2 |
H20 |
180.0 |
180.3 |
| C15 |
C14 |
C11 |
N5 |
67.8 |
62.2 |
| C11 |
C14 |
C15 |
H1 |
239.8 |
120.0 |
| C11 |
C14 |
C15 |
H2 |
120.3 |
240.1 |
| H1 |
C14 |
C15 |
H2 |
240.5 |
120.0 |
| C12 |
C11 |
C14 |
N5 |
237.5 |
238.4 |
| C15 |
C14 |
C11 |
H1 |
120.2 |
240.0 |
| C15 |
C14 |
C11 |
H2 |
239.7 |
119.9 |
| C14 |
C11 |
N5 |
H11 |
296.8 |
299.3 |
| H1 |
C14 |
C11 |
H2 |
119.5 |
240.0 |
| C11 |
N4 |
C9 |
C8 |
180.0 |
179.9 |
| N5 |
C11 |
C14 |
H1 |
307.5 |
182.2 |
| N5 |
C11 |
C14 |
H2 |
188.0 |
302.2 |
| N4 |
C9 |
C8 |
C17 |
180.7 |
180.0 |
| C7 |
C8 |
C17 |
H12 |
180.0 |
270.0 |
| C7 |
C8 |
C17 |
H13 |
300.0 |
30.1 |
| C7 |
C8 |
C17 |
H14 |
60.0 |
150.1 |
| C9 |
C8 |
C17 |
H12 |
359.5 |
89.9 |
| C9 |
C8 |
C17 |
H13 |
119.5 |
210.0 |
| C9 |
C8 |
C17 |
H14 |
239.5 |
330.0 |
| H12 |
C17 |
C8 |
H13 |
240.0 |
239.9 |
| H12 |
C17 |
C8 |
H14 |
120.0 |
119.9 |
| H13 |
C17 |
C8 |
H14 |
240.0 |
240.0 |
| C15 |
C14 |
H1 |
H2 |
119.2 |
240.0 |
| H1 |
C14 |
C11 |
N5 |
307.5 |
182.2 |
| C11 |
C14 |
H1 |
H2 |
240.8 |
120.0 |
| C15 |
C14 |
H2 |
H1 |
240.8 |
120.0 |
| H2 |
C14 |
C11 |
N5 |
188.0 |
302.2 |
| C11 |
C14 |
H2 |
H1 |
119.2 |
240.0 |
| C16 |
C15 |
H3 |
H4 |
118.5 |
240.0 |
| H3 |
C15 |
C14 |
H1 |
53.1 |
59.6 |
| H3 |
C15 |
C14 |
H2 |
172.6 |
299.6 |
| C16 |
C15 |
H4 |
H3 |
241.6 |
120.0 |
| H4 |
C15 |
C14 |
H1 |
294.2 |
179.7 |
| H4 |
C15 |
C14 |
H2 |
53.7 |
59.7 |
| C13 |
C16 |
H5 |
H6 |
118.3 |
240.0 |
| H5 |
C16 |
C15 |
H3 |
310.1 |
299.7 |
| H5 |
C16 |
C15 |
H4 |
69.1 |
179.7 |
| C13 |
C16 |
H6 |
H5 |
241.7 |
120.0 |
| H6 |
C16 |
C15 |
H3 |
191.2 |
59.7 |
| H6 |
C16 |
C15 |
H4 |
310.2 |
299.8 |
| H7 |
C13 |
C16 |
H5 |
288.3 |
60.3 |
| H7 |
C13 |
C16 |
H6 |
47.2 |
300.2 |
| C12 |
C13 |
H7 |
H8 |
241.9 |
240.0 |
| H7 |
C13 |
C12 |
H9 |
311.7 |
60.4 |
| H7 |
C13 |
C12 |
H10 |
70.8 |
300.3 |
| H8 |
C13 |
C16 |
H5 |
46.9 |
180.3 |
| H8 |
C13 |
C16 |
H6 |
165.8 |
60.2 |
| C12 |
C13 |
H8 |
H7 |
118.1 |
120.0 |
| H8 |
C13 |
C12 |
H9 |
193.0 |
300.4 |
| H8 |
C13 |
C12 |
H10 |
312.1 |
180.4 |
| H9 |
C12 |
C13 |
H7 |
311.7 |
60.4 |
| H9 |
C12 |
C13 |
H8 |
193.0 |
300.4 |
| C13 |
C12 |
H9 |
H10 |
118.6 |
240.0 |
| H9 |
C12 |
C11 |
N5 |
169.0 |
58.0 |
| H10 |
C12 |
C13 |
H7 |
70.8 |
300.3 |
| H10 |
C12 |
C13 |
H8 |
312.1 |
180.4 |
| C13 |
C12 |
H10 |
H9 |
241.4 |
120.0 |
| H10 |
C12 |
C11 |
N5 |
49.9 |
178.1 |
| C8 |
C17 |
H12 |
H13 |
120.0 |
120.1 |
| C8 |
C17 |
H12 |
H14 |
240.0 |
240.1 |
| H13 |
C17 |
H12 |
H14 |
120.0 |
120.0 |
| C8 |
C17 |
H13 |
H12 |
239.9 |
240.0 |
| C8 |
C17 |
H13 |
H14 |
120.0 |
120.0 |
| H12 |
C17 |
H13 |
H14 |
240.0 |
240.0 |
| C8 |
C17 |
H14 |
H12 |
120.1 |
119.9 |
| C8 |
C17 |
H14 |
H13 |
240.0 |
240.0 |
| H12 |
C17 |
H14 |
H13 |
120.0 |
120.0 |
| H16 |
N1 |
C3 |
N2 |
193.7 |
353.6 |
| H17 |
C5 |
C6 |
N3 |
180.3 |
180.0 |
| H17 |
C5 |
C3 |
N2 |
180.2 |
180.3 |
| H18 |
N6 |
C6 |
N3 |
360.0 |
180.0 |
| H19 |
N6 |
C6 |
N3 |
120.0 |
0.1 |
| N3 |
C4 |
H20 |
N2 |
180.0 |
179.7 |