PDB Chemical Component N2G

Ideal Model

Chemical Description

Name 2'-deoxy-N-(naphthalen-1-ylmethyl)guanosine 5'-(dihydrogen phosphate)
Formula C21 H22 N5 O7 P
Formal charge 0
Molecular weight 487.402 g/mol
Component type non-polymer

Chemical features

Atom count 56
Chiral atom count 3
Chiral atoms CBE CBC CBD
Observed leaving atoms O3P
Bond count 60
Aromatic bond count 16

Chemical Identifiers

Systematic name (ACDLabs) 2'-deoxy-N-(naphthalen-1-ylmethyl)guanosine 5'-(dihydrogen phosphate)
Systematic name (OpenEye OEToolkits) [(2R,3S,5R)-3-hydroxy-5-[2-(naphthalen-1-ylmethylamino)-6-oxo-1H-purin-9-yl]oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) O[C@H]1C[C@@H](O[C@@H]1CO[P](O)(O)=O)n2cnc3C(=O)NC(=Nc23)NCc4cccc5ccccc45
SMILES (CACTVS) O[CH]1C[CH](O[CH]1CO[P](O)(O)=O)n2cnc3C(=O)NC(=Nc23)NCc4cccc5ccccc45
Stereo SMILES (OpenEye) c1ccc2c(c1)cccc2CNC3=Nc4c(ncn4[C@H]5C[C@@H]([C@H](O5)COP(=O)(O)O)O)C(=O)N3
InChI descriptor InChI=1S/C21H22N5O7P/c27-15-8-17(33-16(15)10-32-34(29,30)31)26-11-23-18-19(26)24-21(25-20(18)28)22-9-13-6-3-5-12-4-1-2-7-14(12)13/h1-7,11,15-17,27H,8-10H2,(H2,29,30,31)(H2,22,24,25,28)/t15-,16+,17+/m0/s1
InChIKey descriptor COMPKRGNHXOXMN-GVDBMIGSSA-N

Status Information

Last modified 2011-06-04
Created 2008-09-26
Release status REL
Model PDB code 2V4T
Processing site EBI