PDB Chemical Component N1V

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for N1V

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C23 C24 1.391 1.384
C23 C22 1.391 1.383
C24 C25 1.395 1.379
C22 C21 1.400 1.380
C25 C20 1.391 1.395
C21 C20 1.401 1.395
C20 C19 1.514 1.479
C01 C02 1.336 1.326
C19 C09 1.538 1.509
C19 C12 1.377 1.321
C02 C09 1.565 1.506
C02 C03 1.517 1.478
C13 C12 1.527 1.507
C13 C14 1.564 1.530
C33 C09 1.536 1.537
C33 C32 1.524 1.538
C08 C03 1.405 1.395
C08 C07 1.399 1.380
C09 C10 1.579 1.553
C15 C16 1.554 1.530
C15 C14 1.556 1.530
C12 C11 1.499 1.512
C03 C04 1.407 1.395
C17 C16 1.555 1.531
C17 C18 1.531 1.530
C07 C06 1.389 1.384
C04 C05 1.398 1.380
C32 C26 1.527 1.534
C06 C05 1.392 1.383
C10 C11 1.535 1.547
C10 C26 1.572 1.537
C26 O27 1.400 1.429
O27 S28 1.617 1.522
S28 O31 1.415 1.420
S28 N30 1.627 1.656
S28 O29 1.395 1.421
C25 H251 1.080 1.080
C24 H241 1.080 1.080
C26 H261 1.100 1.089
C23 H231 1.080 1.080
C22 H221 1.080 1.081
C21 H211 1.080 1.080
C18 H183 1.101 1.090
C18 H181 1.100 1.089
C18 H182 1.100 1.090
C17 H172 1.100 1.089
C17 H171 1.101 1.089
C16 H162 1.100 1.090
C16 H161 1.100 1.090
C15 H151 1.100 1.090
C15 H152 1.100 1.089
C11 H111 1.100 1.091
C11 H112 1.100 1.089
C13 H131 1.100 1.089
C13 H132 1.100 1.091
C14 H142 1.100 1.090
C14 H141 1.100 1.089
C10 H101 1.100 1.090
C01 H012 1.080 1.080
C01 H011 1.080 1.080
C04 H041 1.080 1.080
C05 H051 1.080 1.080
C06 H061 1.080 1.080
C07 H071 1.080 1.080
C08 H081 1.080 1.081
C32 H322 1.100 1.091
C32 H321 1.100 1.089
C33 H331 1.100 1.090
C33 H332 1.100 1.089
N30 H301 1.000 0.971
N30 H302 1.000 0.971

Bond Angles for N1V

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C23 C24 H241 119.4 119.9
C23 C22 C21 121.9 120.1
C22 C23 H231 121.7 119.9
C23 C22 H221 119.1 120.0
C24 C25 C20 122.9 119.8
C24 C25 H251 118.5 120.1
C22 C21 C20 121.8 119.9
C21 C22 H221 119.1 119.9
C22 C21 H211 119.1 120.1
C25 C20 C21 115.5 119.7
C25 C20 C19 122.2 120.1
C20 C25 H251 118.6 120.1
C21 C20 C19 122.3 120.1
C20 C21 H211 119.1 120.1
C20 C19 C09 121.7 124.6
C20 C19 C12 124.9 124.6
C01 C02 C09 118.5 120.0
C01 C02 C03 118.0 120.0
C02 C01 H012 120.0 120.0
C02 C01 H011 120.0 120.0
C12 C19 C09 111.6 110.9
C19 C09 C02 113.9 111.9
C19 C09 C10 102.3 104.7
C19 C12 C11 111.3 110.8
C03 C02 C09 123.5 120.0
C02 C03 C04 123.2 120.2
C15 C14 C13 116.1 109.4
C14 C13 H131 107.2 109.5
C14 C13 H132 107.2 109.4
C13 C14 H142 107.8 109.5
C13 C14 H141 107.8 109.5
C33 C32 H322 110.6 110.0
C33 C32 H321 110.6 110.1
C08 C07 H071 119.5 119.9
C09 C10 H101 109.0 114.1
C15 C16 H162 107.9 109.5
C15 C16 H161 107.9 109.4
C14 C15 H151 107.6 109.5
C14 C15 H152 107.6 109.5
C15 C14 H142 107.8 109.4
C15 C14 H141 107.8 109.5
C12 C11 H111 110.7 110.3
C12 C11 H112 110.7 110.4
C03 C04 C05 123.0 119.9
C03 C04 H041 118.5 120.1
C16 C17 H172 108.0 109.5
C16 C17 H171 108.0 109.4
C17 C16 H162 107.9 109.5
C17 C16 H161 107.9 109.4
C17 C18 H183 109.5 109.5
C17 C18 H181 109.5 109.5
C17 C18 H182 109.5 109.5
C07 C06 H061 121.4 119.9
C05 C04 H041 118.5 120.1
C04 C05 H051 119.3 119.9
C32 C26 O27 113.0 109.9
C32 C26 H261 107.6 109.9
C06 C05 H051 119.4 120.0
C10 C11 H111 110.7 110.4
C10 C11 H112 110.8 110.5
C10 C26 O27 116.2 109.8
C10 C26 H261 107.1 109.8
C26 O27 S28 128.5 114.0
O27 C26 H261 109.3 109.9
O27 S28 O31 101.8 106.4
O27 S28 O29 110.0 106.4
S28 N30 H301 109.5 120.0
S28 N30 H302 109.5 120.0
H183 C18 H181 109.5 109.5
H183 C18 H182 109.5 109.4
H181 C18 H182 109.5 109.5
H172 C17 H171 109.5 109.5
H162 C16 H161 109.5 109.5
H151 C15 H152 109.5 109.5
H111 C11 H112 109.5 110.3
H131 C13 H132 109.5 109.5
H142 C14 H141 109.5 109.6
H012 C01 H011 120.0 120.0
H322 C32 H321 109.5 109.8
H331 C33 H332 109.5 110.1
H301 N30 H302 109.5 119.9

Torsion Angles for N1V

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C23 C24 C25 C20 359.7 0.1
C23 C24 C25 H251 179.7 179.7
C22 C23 C24 H241 179.9 180.0
C23 C22 C21 C20 0.5 0.0
C21 C22 C23 H221 180.0 180.0
C23 C22 C21 H211 180.5 180.0
C24 C25 C20 C21 0.7 359.9
C24 C25 C20 C19 179.4 179.7
C20 C25 C24 H251 180.0 180.4
C21 C22 C23 H231 180.0 180.0
C23 C22 C21 H221 180.0 180.0
C25 C20 C21 C22 359.2 0.0
C22 C21 C20 C19 180.5 180.2
C20 C21 C22 H211 180.0 180.0
C24 C25 C20 H251 180.0 179.6
C22 C21 C20 C25 359.2 0.0
C21 C20 C25 C19 181.3 180.2
C25 C20 C21 H211 179.2 180.1
C25 C20 C19 C09 285.6 250.0
C25 C20 C19 C12 122.4 70.0
C20 C21 C22 H221 180.5 180.0
C22 C21 C20 H211 180.0 180.0
C25 C20 C21 C19 178.7 179.8
C21 C20 C25 H251 180.7 180.3
C21 C20 C19 C09 104.1 69.8
C21 C20 C19 C12 301.0 249.8
C25 C20 C19 C21 181.4 180.2
C19 C20 C25 H251 359.4 0.1
C19 C20 C21 H211 0.5 0.2
C12 C19 C20 C09 196.9 180.0
C20 C19 C09 C02 75.0 75.5
C20 C19 C09 C10 193.6 197.1
C20 C19 C12 C11 177.2 179.9
C19 C09 C02 C01 254.2 245.5
C03 C02 C01 C09 181.3 180.0
C01 C02 C03 C04 304.6 71.6
H012 C01 C02 H011 180.0 180.1
C20 C19 C09 C12 194.8 180.0
C01 C02 C09 C19 254.2 245.5
C09 C19 C12 C11 12.6 359.9
C03 C02 C09 C19 72.8 65.4
C19 C09 C10 H101 231.5 212.4
C20 C19 C12 C09 164.6 180.0
C12 C19 C09 C02 240.2 255.5
C12 C19 C09 C10 358.8 17.1
C19 C12 C11 H111 100.7 101.8
C19 C12 C11 H112 222.3 223.9
C01 C02 C09 C03 181.4 180.0
C09 C02 C01 H012 178.6 185.7
C09 C02 C01 H011 358.6 5.5
C19 C09 C02 C10 114.2 117.3
C09 C02 C03 C04 126.1 251.6
C02 C09 C10 H101 352.9 333.9
C01 C02 C03 C09 178.6 180.0
C03 C02 C01 H012 360.0 5.7
C03 C02 C01 H011 180.0 185.6
C19 C09 C02 C03 72.8 65.4
C02 C03 C04 C05 180.3 180.0
C02 C03 C04 H041 0.3 359.9
C13 C12 C19 C09 184.5 179.9
C15 C14 C13 C12 58.4 180.0
C13 C12 C11 H111 287.4 281.8
C13 C12 C11 H112 49.0 44.0
C13 C14 C15 H151 39.0 60.0
C13 C14 C15 H152 281.0 300.0
C15 C14 C13 H142 239.0 119.9
C15 C14 C13 H141 120.9 240.0
H131 C13 C14 H132 117.4 120.0
H142 C14 C13 H141 241.9 120.1
C33 C09 C10 H101 113.0 96.5
C33 C32 C26 O27 158.7 119.7
C33 C32 C26 H261 279.5 240.6
H322 C32 C33 H321 238.5 121.2
C08 C03 C02 C09 307.1 71.3
C08 C03 C04 H041 179.3 180.2
C08 C07 C06 H061 179.9 179.6
C19 C09 C10 C02 238.7 238.5
C09 C10 C11 H111 257.8 266.8
C09 C10 C11 H112 136.1 144.5
C09 C10 C26 O27 219.5 258.0
C09 C10 C26 H261 97.0 137.1
C15 C16 C17 H172 320.2 60.0
C15 C16 C17 H171 78.5 300.0
C17 C16 C15 H162 239.1 120.0
C17 C16 C15 H161 120.9 240.0
H162 C16 C15 H161 241.8 120.0
C15 C14 C13 H131 297.1 60.0
C15 C14 C13 H132 179.7 299.9
C13 C14 C15 H142 121.0 240.1
C13 C14 C15 H141 239.1 120.0
C14 C15 C16 H162 282.5 60.0
C14 C15 C16 H161 40.6 300.0
H151 C15 C14 H152 117.9 120.0
H142 C14 C15 H141 118.1 239.9
C11 C12 C19 C09 12.6 359.9
C10 C11 C12 H111 240.8 241.2
C10 C11 C12 H112 119.2 119.0
H111 C11 C12 H112 238.4 237.8
C04 C03 C02 C09 126.1 251.6
C05 C04 C03 H041 180.0 180.0
C03 C04 C05 H051 180.4 180.0
C15 C16 C17 H162 120.9 240.0
C15 C16 C17 H161 239.1 120.0
C16 C17 C18 H183 180.0 60.0
C16 C17 C18 H181 300.0 180.0
C16 C17 C18 H182 60.0 300.0
H172 C17 C16 H171 241.7 120.0
H162 C16 C17 H161 118.2 240.0
H183 C18 C17 H181 240.0 240.0
H183 C18 C17 H182 120.0 120.0
H181 C18 C17 H182 240.0 240.0
C07 C06 C05 H051 180.0 180.0
C03 C04 C05 H041 180.0 180.0
C06 C05 C04 H051 180.0 180.0
C10 C26 C32 O27 233.8 240.5
C10 C26 C32 H261 113.0 119.5
C32 C26 O27 S28 130.6 96.7
O27 C26 C32 H261 239.2 239.0
C06 C05 C04 H041 180.4 180.1
C04 C05 C06 H051 180.0 180.0
C19 C09 C10 C11 349.9 334.3
C12 C11 C10 H111 119.2 118.8
C12 C11 C10 H112 240.8 241.1
C11 C10 C26 O27 338.5 5.9
C11 C10 C26 H261 216.0 245.0
H111 C11 C10 H112 121.6 122.3
C32 C26 C10 O27 124.2 119.5
C32 C26 C10 H261 246.6 240.4
C10 C26 O27 S28 249.5 214.7
O27 C26 C10 H261 122.5 120.9
C32 C26 O27 H261 119.8 121.0
C10 C26 O27 H261 238.7 239.1
C26 O27 S28 O31 307.7 188.5
C26 O27 S28 O29 179.9 321.5
S28 O27 C26 H261 10.8 335.7
O27 S28 N30 H301 180.0 360.0
O27 S28 N30 H302 300.0 180.0
O27 S28 O31 O29 238.7 123.0
O31 S28 N30 H301 288.6 246.4
O31 S28 N30 H302 48.6 66.4
C26 O27 S28 N30 61.9 75.0
H301 N30 S28 H302 240.0 180.0
O27 S28 O29 O31 117.1 237.0
O29 S28 N30 H301 61.9 113.5
O29 S28 N30 H302 181.9 293.5
C24 C25 H251 C20 180.0 180.4
H251 C25 C20 C21 180.7 180.3
H251 C25 C20 C19 359.4 0.1
H241 C24 C25 C20 179.7 180.0
H241 C24 C25 H251 359.7 359.6
C32 C26 H261 O27 236.9 239.0
C10 C26 H261 O27 126.6 120.9
H261 C26 O27 S28 10.8 335.7
H231 C23 C24 H241 359.9 360.0
H231 C23 C22 C21 180.0 180.0
H231 C23 C22 H221 360.0 0.0
C23 C22 H221 C21 180.0 180.0
H221 C22 C23 H231 360.0 0.0
H221 C22 C21 C20 180.5 180.0
H221 C22 C21 H211 0.5 360.0
C22 C21 H211 C20 180.0 180.0
H211 C21 C22 H221 0.5 360.0
H211 C21 C20 C19 0.5 0.2
C17 C18 H183 H181 120.0 120.0
C17 C18 H183 H182 240.0 240.0
H181 C18 H183 H182 120.0 120.0
C17 C18 H181 H183 240.0 240.0
C17 C18 H181 H182 120.0 120.0
H183 C18 H181 H182 240.0 240.0
C17 C18 H182 H183 120.0 120.0
C17 C18 H182 H181 240.0 240.0
H183 C18 H182 H181 120.0 120.0
C16 C17 H172 H171 117.3 240.0
H172 C17 C16 H162 199.3 180.0
H172 C17 C16 H161 81.1 300.0
H172 C17 C18 H183 59.1 180.0
H172 C17 C18 H181 179.2 300.0
H172 C17 C18 H182 299.2 60.0
C16 C17 H171 H172 242.7 120.0
H171 C17 C16 H162 317.6 60.0
H171 C17 C16 H161 199.4 180.0
H171 C17 C18 H183 300.9 300.0
H171 C17 C18 H181 60.9 60.0
H171 C17 C18 H182 180.9 180.1
C15 C16 H162 H161 117.1 240.0
H162 C16 C17 H172 199.3 180.0
H162 C16 C17 H171 317.6 60.0
C17 C16 H162 H161 242.9 120.0
C15 C16 H161 H162 242.8 120.0
H161 C16 C17 H172 81.1 300.0
H161 C16 C17 H171 199.4 180.0
C17 C16 H161 H162 117.1 240.0
H151 C15 C14 C13 39.0 60.0
H151 C15 C16 H162 43.5 180.0
H151 C15 C16 H161 161.7 60.0
C14 C15 H151 H152 243.3 240.0
H151 C15 C14 H142 278.0 180.0
H151 C15 C14 H141 159.9 300.0
H152 C15 C14 C13 281.0 300.0
H152 C15 C16 H162 161.4 300.0
H152 C15 C16 H161 279.6 180.0
C14 C15 H152 H151 116.7 120.0
H152 C15 C14 H142 160.1 59.9
H152 C15 C14 H141 42.0 180.0
C12 C11 H111 H112 122.3 122.2
C10 C11 H111 H112 237.6 237.6
C12 C11 H112 H111 237.7 237.8
C10 C11 H112 H111 122.4 122.3
C14 C13 H131 H132 244.1 240.0
H131 C13 C14 H142 58.1 300.0
H131 C13 C14 H141 176.2 179.9
C14 C13 H132 H131 115.9 120.0
H132 C13 C14 H142 300.7 180.0
H132 C13 C14 H141 58.8 59.9
C15 C14 H142 C13 126.0 240.1
H142 C14 C13 H131 58.1 300.0
H142 C14 C13 H132 300.7 180.0
C13 C14 H142 H141 117.0 239.9
H142 C14 C15 H151 278.0 180.0
H142 C14 C15 H152 160.1 59.9
C15 C14 H142 H141 243.0 120.0
C15 C14 H141 C13 234.0 119.9
H141 C14 C13 H131 176.2 179.9
H141 C14 C13 H132 58.8 59.9
C13 C14 H141 H142 243.0 120.0
H141 C14 C15 H151 159.9 300.0
H141 C14 C15 H152 42.0 180.0
C15 C14 H141 H142 117.0 240.0
H101 C10 C11 H111 15.8 29.4
H101 C10 C11 H112 254.2 267.1
H101 C10 C26 O27 100.6 132.5
H101 C10 C26 H261 338.2 11.5
H012 C01 C02 C09 178.6 185.7
H012 C01 C02 C03 360.0 5.7
C02 C01 H012 H011 180.0 179.9
H011 C01 C02 C09 358.6 5.5
H011 C01 C02 C03 180.0 185.6
C02 C01 H011 H012 180.0 180.1
C03 C04 H041 C05 180.0 180.0
H041 C04 C05 H051 0.4 0.1
H051 C05 C04 H041 0.4 0.1
H061 C06 C05 H051 0.0 0.0
H071 C07 C06 H061 360.0 0.0
H081 C08 C07 H071 359.7 359.9
C33 C32 H322 H321 122.1 238.7
H322 C32 C26 O27 39.5 239.1
H322 C32 C26 H261 160.3 0.1
C33 C32 H321 H322 237.9 121.3
H321 C32 C26 O27 278.0 0.1
H321 C32 C26 H261 38.8 121.0
H331 C33 C32 H322 321.2 103.4
H331 C33 C32 H321 82.7 342.2
H332 C33 C32 H322 200.6 341.8
H332 C33 C32 H321 322.0 220.6
S28 N30 H301 H302 120.0 180.0
S28 N30 H302 H301 240.0 180.0