PDB Chemical Component MZJ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MZJ
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O30 |
C29 |
1.223 |
1.217 |
C2 |
N1 |
1.335 |
1.318 |
C2 |
N3 |
1.336 |
1.318 |
C12 |
N13 |
1.446 |
1.469 |
C12 |
C11 |
1.511 |
1.532 |
C32 |
C31 |
1.447 |
1.330 |
C29 |
N13 |
1.334 |
1.349 |
C29 |
C31 |
1.460 |
1.470 |
N1 |
C6 |
1.348 |
1.330 |
N3 |
C4 |
1.347 |
1.330 |
N13 |
C14 |
1.459 |
1.469 |
C11 |
C10 |
1.525 |
1.531 |
C14 |
C15 |
1.530 |
1.532 |
C9 |
C10 |
1.533 |
1.530 |
C9 |
N8 |
1.456 |
1.465 |
C6 |
N8 |
1.353 |
1.384 |
C6 |
C5 |
1.483 |
1.403 |
C4 |
N7 |
1.350 |
1.385 |
C4 |
C5 |
1.392 |
1.404 |
C10 |
C15 |
1.536 |
1.530 |
C5 |
C16 |
1.499 |
1.482 |
C16 |
C17 |
1.384 |
1.394 |
C16 |
C21 |
1.392 |
1.395 |
C17 |
C18 |
1.395 |
1.379 |
C21 |
C20 |
1.391 |
1.378 |
C18 |
C19 |
1.386 |
1.388 |
C20 |
C19 |
1.384 |
1.389 |
C19 |
O22 |
1.376 |
1.358 |
C24 |
C25 |
1.454 |
1.382 |
C24 |
C23 |
1.339 |
1.387 |
O22 |
C23 |
1.464 |
1.359 |
C25 |
C26 |
1.259 |
1.382 |
C23 |
C28 |
1.268 |
1.388 |
C26 |
C27 |
1.208 |
1.383 |
C28 |
C27 |
1.206 |
1.381 |
C10 |
H1 |
1.100 |
1.090 |
C15 |
H2 |
1.100 |
1.090 |
C15 |
H3 |
1.100 |
1.090 |
C17 |
H4 |
1.080 |
1.081 |
C20 |
H5 |
1.080 |
1.080 |
C21 |
H6 |
1.080 |
1.080 |
C24 |
H7 |
1.080 |
1.079 |
C26 |
H8 |
1.080 |
1.080 |
C28 |
H9 |
1.080 |
1.081 |
C31 |
H10 |
1.080 |
1.080 |
C32 |
H12 |
1.080 |
1.080 |
C32 |
H13 |
1.079 |
1.080 |
C12 |
H15 |
1.100 |
1.090 |
C12 |
H16 |
1.100 |
1.090 |
C11 |
H17 |
1.100 |
1.090 |
C11 |
H18 |
1.100 |
1.090 |
C14 |
H19 |
1.100 |
1.090 |
C14 |
H20 |
1.100 |
1.090 |
C9 |
H21 |
1.100 |
1.090 |
C9 |
H22 |
1.101 |
1.090 |
N8 |
H23 |
1.000 |
0.970 |
N7 |
H24 |
1.000 |
0.970 |
N7 |
H25 |
1.000 |
0.970 |
C2 |
H26 |
1.080 |
1.080 |
C18 |
H27 |
1.080 |
1.079 |
C27 |
H28 |
1.080 |
1.080 |
C25 |
H29 |
1.080 |
1.080 |
Bond Angles for MZJ
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O30 |
C29 |
N13 |
123.4 |
119.9 |
O30 |
C29 |
C31 |
119.8 |
120.1 |
C12 |
N13 |
C14 |
113.7 |
118.8 |
C11 |
C12 |
H15 |
109.7 |
109.6 |
C11 |
C12 |
H16 |
109.7 |
109.6 |
C12 |
C11 |
H17 |
108.3 |
109.5 |
C12 |
C11 |
H18 |
108.4 |
109.5 |
C32 |
C31 |
H10 |
122.6 |
120.0 |
C31 |
C29 |
N13 |
116.3 |
120.0 |
C29 |
N13 |
C14 |
123.5 |
120.6 |
C29 |
C31 |
H10 |
122.5 |
120.1 |
N1 |
C6 |
N8 |
117.3 |
120.6 |
N1 |
C6 |
C5 |
118.8 |
118.9 |
N3 |
C4 |
N7 |
119.7 |
120.6 |
N3 |
C4 |
C5 |
119.4 |
118.9 |
N13 |
C14 |
H19 |
109.0 |
109.6 |
N13 |
C14 |
H20 |
109.0 |
109.6 |
C11 |
C10 |
H1 |
107.6 |
109.4 |
C14 |
C15 |
H2 |
107.0 |
109.5 |
C14 |
C15 |
H3 |
107.0 |
109.6 |
C9 |
C10 |
H1 |
107.5 |
109.4 |
C6 |
N8 |
C9 |
117.8 |
120.0 |
N8 |
C9 |
H21 |
108.6 |
109.5 |
N8 |
C9 |
H22 |
108.6 |
109.5 |
C9 |
N8 |
H23 |
107.4 |
120.0 |
C6 |
N8 |
H23 |
107.3 |
120.0 |
C6 |
C5 |
C16 |
124.6 |
121.0 |
C5 |
C4 |
N7 |
120.8 |
120.6 |
C4 |
N7 |
H24 |
109.5 |
120.0 |
C4 |
N7 |
H25 |
109.4 |
120.0 |
C4 |
C5 |
C16 |
118.5 |
121.0 |
C15 |
C10 |
H1 |
107.5 |
109.5 |
C10 |
C15 |
H2 |
107.0 |
109.5 |
C10 |
C15 |
H3 |
107.0 |
109.5 |
C5 |
C16 |
C17 |
121.1 |
120.1 |
C5 |
C16 |
C21 |
119.5 |
120.1 |
C16 |
C17 |
C18 |
119.9 |
120.0 |
C16 |
C17 |
H4 |
120.0 |
120.0 |
C16 |
C21 |
H6 |
119.6 |
120.0 |
C17 |
C18 |
C19 |
120.5 |
120.0 |
C18 |
C17 |
H4 |
120.1 |
120.0 |
C17 |
C18 |
H27 |
119.7 |
120.0 |
C21 |
C20 |
C19 |
119.6 |
120.1 |
C21 |
C20 |
H5 |
120.2 |
120.0 |
C18 |
C19 |
O22 |
120.1 |
119.9 |
C20 |
C19 |
O22 |
120.1 |
119.9 |
C19 |
C20 |
H5 |
120.2 |
119.9 |
C19 |
O22 |
C23 |
119.5 |
118.0 |
C23 |
C24 |
C25 |
114.7 |
119.9 |
C24 |
C25 |
C26 |
117.0 |
120.1 |
C25 |
C24 |
H7 |
122.6 |
120.1 |
C24 |
C25 |
H29 |
121.5 |
119.9 |
C24 |
C23 |
O22 |
120.8 |
120.0 |
C24 |
C23 |
C28 |
118.4 |
119.9 |
C23 |
C24 |
H7 |
122.7 |
120.1 |
C25 |
C26 |
H8 |
119.0 |
119.9 |
C23 |
C28 |
C27 |
123.4 |
120.0 |
C23 |
C28 |
H9 |
118.3 |
120.0 |
C26 |
C27 |
C28 |
124.4 |
120.0 |
C27 |
C26 |
H8 |
119.0 |
119.9 |
C26 |
C27 |
H28 |
117.8 |
119.9 |
C27 |
C28 |
H9 |
118.3 |
120.0 |
C28 |
C27 |
H28 |
117.8 |
120.0 |
H2 |
C15 |
H3 |
109.5 |
109.5 |
H12 |
C32 |
H13 |
120.0 |
119.9 |
H15 |
C12 |
H16 |
109.5 |
109.7 |
H17 |
C11 |
H18 |
109.5 |
109.6 |
H19 |
C14 |
H20 |
109.5 |
109.7 |
H21 |
C9 |
H22 |
109.5 |
109.5 |
H24 |
N7 |
H25 |
109.5 |
120.0 |
Torsion Angles for MZJ
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C31 |
C29 |
O30 |
N13 |
188.7 |
180.0 |
O30 |
C29 |
N13 |
C14 |
182.2 |
354.6 |
O30 |
C29 |
C31 |
H10 |
209.9 |
185.0 |
C29 |
N13 |
C12 |
C14 |
181.5 |
180.0 |
C12 |
N13 |
C14 |
H19 |
173.9 |
186.7 |
C12 |
N13 |
C14 |
H20 |
293.3 |
66.2 |
C11 |
C12 |
N13 |
C14 |
292.7 |
53.6 |
C12 |
C11 |
C10 |
H1 |
205.3 |
301.3 |
H15 |
C12 |
C11 |
H16 |
120.3 |
120.4 |
H17 |
C11 |
C12 |
H18 |
241.2 |
120.2 |
C32 |
C31 |
C29 |
N13 |
218.0 |
184.9 |
C29 |
C31 |
C32 |
H10 |
180.0 |
180.0 |
O30 |
C29 |
N13 |
C31 |
188.4 |
180.0 |
C12 |
N13 |
C29 |
C14 |
178.4 |
180.0 |
N13 |
C29 |
C31 |
H10 |
38.0 |
5.0 |
C29 |
N13 |
C14 |
H19 |
352.4 |
6.6 |
C29 |
N13 |
C14 |
H20 |
111.8 |
246.2 |
O30 |
C29 |
C31 |
N13 |
171.9 |
180.0 |
C32 |
C31 |
C29 |
H10 |
180.0 |
180.0 |
C31 |
C29 |
N13 |
C14 |
353.8 |
174.6 |
N1 |
C6 |
N8 |
C9 |
3.8 |
0.1 |
N1 |
C6 |
N8 |
H23 |
242.7 |
180.0 |
N1 |
C6 |
C5 |
C16 |
179.2 |
180.0 |
C5 |
C4 |
N3 |
N7 |
181.3 |
180.0 |
N3 |
C4 |
N7 |
H24 |
360.0 |
0.0 |
N3 |
C4 |
N7 |
H25 |
120.0 |
180.0 |
N3 |
C4 |
C5 |
C16 |
180.3 |
180.0 |
N13 |
C14 |
C15 |
H2 |
90.2 |
294.7 |
N13 |
C14 |
C15 |
H3 |
207.5 |
174.6 |
H19 |
C14 |
N13 |
H20 |
240.6 |
120.5 |
C9 |
C10 |
C11 |
H1 |
243.7 |
240.1 |
C15 |
C10 |
C11 |
H1 |
118.8 |
120.0 |
C11 |
C10 |
C15 |
H2 |
262.2 |
58.6 |
C11 |
C10 |
C15 |
H3 |
145.0 |
178.6 |
C14 |
C15 |
C10 |
H1 |
142.4 |
58.7 |
C10 |
C15 |
C14 |
H2 |
238.6 |
119.9 |
C10 |
C15 |
C14 |
H3 |
121.4 |
240.0 |
H2 |
C15 |
C14 |
H3 |
242.8 |
120.1 |
C11 |
C10 |
C9 |
H1 |
116.3 |
119.9 |
C6 |
N8 |
C9 |
C10 |
149.4 |
180.0 |
C15 |
C10 |
C9 |
H1 |
242.3 |
240.0 |
C9 |
C10 |
C15 |
H2 |
138.7 |
298.6 |
C9 |
C10 |
C15 |
H3 |
21.5 |
58.6 |
N8 |
C9 |
C10 |
H1 |
58.6 |
305.0 |
C6 |
N8 |
C9 |
H23 |
238.8 |
180.0 |
H21 |
C9 |
N8 |
H22 |
119.0 |
120.0 |
N1 |
C6 |
N8 |
C5 |
180.6 |
180.1 |
C6 |
N8 |
C9 |
H21 |
28.9 |
60.0 |
C6 |
N8 |
C9 |
H22 |
269.9 |
300.0 |
C9 |
N8 |
C6 |
H23 |
121.2 |
180.0 |
N8 |
C6 |
C5 |
C16 |
359.8 |
0.1 |
N1 |
C6 |
C5 |
N8 |
179.4 |
179.9 |
C6 |
C5 |
C4 |
N7 |
181.8 |
180.1 |
C4 |
C5 |
C6 |
C16 |
179.7 |
180.0 |
C6 |
C5 |
C16 |
C17 |
65.5 |
244.9 |
C6 |
C5 |
C16 |
C21 |
242.9 |
65.0 |
N3 |
C4 |
N7 |
C5 |
181.3 |
180.0 |
N7 |
C4 |
C5 |
C16 |
1.5 |
0.0 |
H24 |
N7 |
C4 |
H25 |
240.0 |
180.0 |
N1 |
C6 |
C5 |
C4 |
358.9 |
359.9 |
N3 |
C4 |
C5 |
N7 |
178.7 |
180.0 |
C6 |
C5 |
C4 |
C16 |
180.2 |
180.0 |
C5 |
C4 |
N7 |
H24 |
178.7 |
180.0 |
C5 |
C4 |
N7 |
H25 |
298.7 |
0.0 |
C4 |
C5 |
C16 |
C17 |
245.7 |
65.0 |
C4 |
C5 |
C16 |
C21 |
63.1 |
245.0 |
C11 |
C10 |
C15 |
H1 |
241.2 |
240.0 |
C14 |
C15 |
C10 |
H2 |
121.4 |
240.1 |
C14 |
C15 |
C10 |
H3 |
238.6 |
120.0 |
C9 |
C10 |
C15 |
H1 |
117.7 |
120.0 |
H2 |
C15 |
C10 |
H3 |
117.2 |
240.0 |
C16 |
C5 |
C4 |
N7 |
1.5 |
0.0 |
C5 |
C16 |
C17 |
C18 |
178.1 |
179.9 |
C5 |
C16 |
C17 |
H4 |
358.2 |
359.8 |
C5 |
C16 |
C21 |
H6 |
1.6 |
0.2 |
C5 |
C16 |
C17 |
C21 |
177.4 |
180.0 |
C16 |
C17 |
C18 |
C19 |
358.7 |
359.8 |
C18 |
C17 |
C16 |
H4 |
180.0 |
180.2 |
C16 |
C17 |
C18 |
H27 |
178.7 |
179.7 |
C5 |
C16 |
C21 |
C17 |
182.6 |
180.0 |
C21 |
C16 |
C17 |
C18 |
0.8 |
359.9 |
C21 |
C16 |
C17 |
H4 |
180.8 |
179.7 |
C16 |
C21 |
C20 |
C19 |
1.6 |
0.2 |
C16 |
C21 |
C20 |
H5 |
181.6 |
180.2 |
C16 |
C17 |
C18 |
H4 |
180.0 |
179.8 |
C17 |
C18 |
C19 |
O22 |
180.0 |
180.0 |
C5 |
C16 |
C21 |
C20 |
181.6 |
180.0 |
C21 |
C20 |
C19 |
O22 |
179.9 |
180.0 |
C19 |
C20 |
C21 |
H5 |
180.0 |
180.0 |
C19 |
C18 |
C17 |
H4 |
178.7 |
180.0 |
C17 |
C18 |
C19 |
H27 |
180.0 |
179.9 |
C20 |
C19 |
C18 |
O22 |
182.0 |
180.4 |
C18 |
C19 |
C20 |
H5 |
177.9 |
179.5 |
C18 |
C19 |
O22 |
C23 |
68.4 |
75.9 |
C17 |
C18 |
C19 |
C20 |
2.0 |
0.4 |
C21 |
C20 |
C19 |
H5 |
180.0 |
180.0 |
C18 |
C19 |
C20 |
O22 |
178.0 |
179.6 |
C20 |
C19 |
O22 |
C23 |
246.3 |
255.5 |
O22 |
C19 |
C20 |
H5 |
359.9 |
360.0 |
C24 |
C23 |
O22 |
C19 |
13.8 |
355.2 |
C25 |
C24 |
C23 |
O22 |
179.4 |
180.0 |
C25 |
C24 |
C23 |
C28 |
360.0 |
0.0 |
C23 |
C24 |
C25 |
H7 |
180.0 |
179.7 |
C24 |
C25 |
C26 |
H8 |
177.7 |
180.0 |
C19 |
O22 |
C23 |
C24 |
13.8 |
355.2 |
C23 |
C24 |
C25 |
C26 |
1.7 |
360.0 |
C25 |
C24 |
C23 |
H7 |
180.0 |
180.3 |
C23 |
C24 |
C25 |
H29 |
181.7 |
180.0 |
C24 |
C23 |
C28 |
C27 |
358.7 |
360.0 |
C24 |
C23 |
C28 |
H9 |
178.7 |
179.9 |
O22 |
C23 |
C24 |
C25 |
179.4 |
180.0 |
C24 |
C23 |
O22 |
C28 |
180.6 |
180.1 |
O22 |
C23 |
C24 |
H7 |
359.4 |
359.6 |
O22 |
C23 |
C28 |
C27 |
179.3 |
180.0 |
O22 |
C23 |
C28 |
H9 |
359.3 |
360.0 |
C26 |
C25 |
C24 |
H7 |
181.8 |
180.3 |
C24 |
C25 |
C26 |
H29 |
180.0 |
180.0 |
C27 |
C26 |
C25 |
H8 |
180.0 |
180.0 |
C25 |
C26 |
C27 |
H28 |
181.2 |
180.0 |
C28 |
C23 |
C24 |
C25 |
360.0 |
0.0 |
C24 |
C23 |
C28 |
O22 |
179.4 |
179.9 |
C28 |
C23 |
C24 |
H7 |
180.0 |
179.7 |
C26 |
C27 |
C28 |
C23 |
0.8 |
0.0 |
C27 |
C28 |
C23 |
H9 |
180.0 |
180.0 |
C23 |
C28 |
C27 |
H28 |
180.8 |
180.0 |
C24 |
C25 |
C26 |
C27 |
357.6 |
0.0 |
C25 |
C26 |
C27 |
H8 |
180.0 |
180.0 |
C23 |
C28 |
C27 |
C26 |
0.8 |
0.0 |
C26 |
C27 |
C28 |
H9 |
180.8 |
180.1 |
C28 |
C27 |
C26 |
H28 |
180.0 |
180.0 |
C23 |
C28 |
C27 |
H9 |
180.0 |
180.0 |
C28 |
C27 |
C26 |
H8 |
181.2 |
180.0 |
C26 |
C27 |
C28 |
H28 |
180.0 |
180.0 |
H1 |
C10 |
C15 |
H2 |
21.0 |
178.6 |
H1 |
C10 |
C15 |
H3 |
263.8 |
298.6 |
C14 |
C15 |
H2 |
H3 |
115.6 |
239.9 |
H2 |
C15 |
C10 |
H1 |
21.0 |
178.6 |
C10 |
C15 |
H2 |
H3 |
244.5 |
120.0 |
C14 |
C15 |
H3 |
H2 |
244.4 |
120.1 |
H3 |
C15 |
C10 |
H1 |
263.8 |
298.6 |
C10 |
C15 |
H3 |
H2 |
115.5 |
240.0 |
C16 |
C17 |
H4 |
C18 |
180.0 |
180.2 |
H4 |
C17 |
C18 |
C19 |
178.7 |
180.0 |
H4 |
C17 |
C18 |
H27 |
358.7 |
359.9 |
C21 |
C20 |
H5 |
C19 |
180.0 |
180.0 |
H5 |
C20 |
C19 |
O22 |
359.9 |
360.0 |
H6 |
C21 |
C20 |
C19 |
181.6 |
180.0 |
H6 |
C21 |
C20 |
H5 |
1.6 |
0.0 |
C23 |
C24 |
H7 |
C25 |
180.0 |
180.3 |
H7 |
C24 |
C25 |
C26 |
181.8 |
180.3 |
H7 |
C24 |
C25 |
H29 |
1.8 |
0.3 |
H7 |
C24 |
C23 |
O22 |
359.4 |
359.6 |
H7 |
C24 |
C23 |
C28 |
180.0 |
179.7 |
H8 |
C26 |
C27 |
C28 |
181.2 |
180.0 |
H8 |
C26 |
C27 |
H28 |
1.1 |
0.0 |
C23 |
C28 |
H9 |
C27 |
180.0 |
180.0 |
H9 |
C28 |
C27 |
H28 |
0.8 |
0.0 |
H10 |
C31 |
C29 |
N13 |
38.0 |
5.0 |
H12 |
C32 |
C31 |
H10 |
0.0 |
180.0 |
H13 |
C32 |
C31 |
H10 |
180.0 |
360.0 |
H15 |
C12 |
N13 |
C14 |
52.5 |
173.4 |
C11 |
C12 |
H15 |
H16 |
239.6 |
239.7 |
H15 |
C12 |
C11 |
H17 |
57.9 |
65.6 |
H15 |
C12 |
C11 |
H18 |
176.6 |
305.4 |
H16 |
C12 |
N13 |
C14 |
172.8 |
293.8 |
C11 |
C12 |
H16 |
H15 |
120.4 |
120.3 |
H16 |
C12 |
C11 |
H17 |
297.6 |
305.2 |
H16 |
C12 |
C11 |
H18 |
56.3 |
185.1 |
H17 |
C11 |
C12 |
H15 |
57.9 |
65.6 |
H17 |
C11 |
C12 |
H16 |
297.6 |
305.2 |
C12 |
C11 |
H17 |
H18 |
118.0 |
239.9 |
H17 |
C11 |
C10 |
H1 |
84.6 |
61.3 |
H18 |
C11 |
C12 |
H15 |
176.6 |
305.4 |
H18 |
C11 |
C12 |
H16 |
56.3 |
185.1 |
C12 |
C11 |
H18 |
H17 |
242.0 |
120.1 |
H18 |
C11 |
C10 |
H1 |
325.9 |
181.4 |
N13 |
C14 |
H19 |
H20 |
119.1 |
239.6 |
H19 |
C14 |
C15 |
H2 |
329.9 |
54.5 |
H19 |
C14 |
C15 |
H3 |
87.2 |
294.4 |
N13 |
C14 |
H20 |
H19 |
240.9 |
120.4 |
H20 |
C14 |
C15 |
H2 |
210.5 |
174.9 |
H20 |
C14 |
C15 |
H3 |
327.8 |
54.8 |
H21 |
C9 |
C10 |
H1 |
179.2 |
65.0 |
N8 |
C9 |
H21 |
H22 |
241.6 |
240.0 |
H21 |
C9 |
N8 |
H23 |
150.1 |
240.0 |
H22 |
C9 |
C10 |
H1 |
298.1 |
185.0 |
N8 |
C9 |
H22 |
H21 |
118.4 |
120.0 |
H22 |
C9 |
N8 |
H23 |
31.1 |
120.0 |
C6 |
N8 |
H23 |
C9 |
127.6 |
180.0 |
H23 |
N8 |
C9 |
H21 |
150.1 |
240.0 |
H23 |
N8 |
C9 |
H22 |
31.1 |
120.0 |
C4 |
N7 |
H24 |
H25 |
120.0 |
180.0 |
C4 |
N7 |
H25 |
H24 |
240.0 |
180.0 |
C17 |
C18 |
H27 |
C19 |
180.0 |
180.1 |
H27 |
C18 |
C17 |
H4 |
358.7 |
359.9 |
H27 |
C18 |
C19 |
O22 |
360.0 |
0.1 |
C26 |
C27 |
H28 |
C28 |
180.0 |
180.0 |
H28 |
C27 |
C26 |
H8 |
1.1 |
0.0 |
H28 |
C27 |
C28 |
H9 |
0.8 |
0.0 |
C24 |
C25 |
H29 |
C26 |
180.0 |
180.0 |
H29 |
C25 |
C24 |
H7 |
1.8 |
0.3 |
H29 |
C25 |
C26 |
H8 |
357.7 |
360.0 |