PDB Chemical Component MYF
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MYF
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O22 |
C7 |
1.212 |
1.223 |
C7 |
C6 |
1.500 |
1.470 |
C7 |
C8 |
1.462 |
1.477 |
C6 |
C1 |
1.497 |
1.396 |
C6 |
C5 |
1.484 |
1.394 |
C1 |
O21 |
1.332 |
1.362 |
C1 |
C2 |
1.404 |
1.396 |
O21 |
HO21 |
0.950 |
0.970 |
C2 |
C3 |
1.402 |
1.396 |
C2 |
H2 |
1.080 |
1.085 |
C3 |
O20 |
1.328 |
1.362 |
C3 |
C4 |
1.397 |
1.395 |
O20 |
HO20 |
0.950 |
0.970 |
C5 |
C4 |
1.408 |
1.395 |
C5 |
O10 |
1.383 |
1.372 |
C4 |
H4 |
1.080 |
1.086 |
O10 |
C9 |
1.450 |
1.387 |
C9 |
C8 |
1.345 |
1.342 |
C9 |
C11 |
1.475 |
1.477 |
C8 |
H8 |
1.079 |
1.085 |
C11 |
C12 |
1.397 |
1.397 |
C11 |
C16 |
1.408 |
1.396 |
C12 |
C13 |
1.394 |
1.395 |
C12 |
H12 |
1.080 |
1.087 |
C13 |
O19 |
1.334 |
1.362 |
C13 |
C14 |
1.502 |
1.395 |
O19 |
HO19 |
0.950 |
0.969 |
C14 |
C15 |
1.506 |
1.395 |
C14 |
O18 |
1.335 |
1.363 |
O18 |
HO18 |
0.950 |
0.970 |
C15 |
C16 |
1.408 |
1.395 |
C15 |
O17 |
1.348 |
1.363 |
C16 |
H16 |
1.080 |
1.088 |
O17 |
HO17 |
0.950 |
0.970 |
Bond Angles for MYF
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O22 |
C7 |
C6 |
122.3 |
122.3 |
O22 |
C7 |
C8 |
118.4 |
121.5 |
C6 |
C7 |
C8 |
119.3 |
116.2 |
C7 |
C6 |
C1 |
125.3 |
120.8 |
C7 |
C6 |
C5 |
117.5 |
118.8 |
C7 |
C8 |
C9 |
119.3 |
119.4 |
C7 |
C8 |
H8 |
120.4 |
118.0 |
C1 |
C6 |
C5 |
117.2 |
120.4 |
C6 |
C1 |
O21 |
121.5 |
122.6 |
C6 |
C1 |
C2 |
119.6 |
119.5 |
C6 |
C5 |
C4 |
119.2 |
120.0 |
C6 |
C5 |
O10 |
119.7 |
122.9 |
O21 |
C1 |
C2 |
119.0 |
117.9 |
C1 |
O21 |
HO21 |
109.5 |
110.3 |
C1 |
C2 |
C3 |
120.8 |
120.2 |
C1 |
C2 |
H2 |
119.6 |
119.9 |
C3 |
C2 |
H2 |
119.6 |
119.9 |
C2 |
C3 |
O20 |
120.5 |
119.9 |
C2 |
C3 |
C4 |
121.9 |
120.2 |
O20 |
C3 |
C4 |
117.6 |
119.9 |
C3 |
O20 |
HO20 |
109.5 |
110.2 |
C3 |
C4 |
C5 |
121.4 |
119.8 |
C3 |
C4 |
H4 |
119.3 |
119.5 |
C4 |
C5 |
O10 |
121.1 |
117.1 |
C5 |
C4 |
H4 |
119.3 |
120.8 |
C5 |
O10 |
C9 |
120.7 |
118.4 |
O10 |
C9 |
C8 |
123.6 |
124.3 |
O10 |
C9 |
C11 |
115.5 |
114.0 |
C8 |
C9 |
C11 |
120.7 |
121.8 |
C9 |
C8 |
H8 |
120.3 |
122.6 |
C9 |
C11 |
C12 |
119.5 |
120.1 |
C9 |
C11 |
C16 |
117.5 |
120.2 |
C12 |
C11 |
C16 |
122.7 |
119.7 |
C11 |
C12 |
C13 |
120.5 |
120.1 |
C11 |
C12 |
H12 |
119.7 |
120.3 |
C11 |
C16 |
C15 |
121.3 |
120.2 |
C11 |
C16 |
H16 |
119.3 |
120.4 |
C13 |
C12 |
H12 |
119.7 |
119.6 |
C12 |
C13 |
O19 |
117.8 |
119.4 |
C12 |
C13 |
C14 |
119.5 |
120.0 |
O19 |
C13 |
C14 |
122.7 |
120.6 |
C13 |
O19 |
HO19 |
109.5 |
110.2 |
C13 |
C14 |
C15 |
117.9 |
120.0 |
C13 |
C14 |
O18 |
119.9 |
120.0 |
O18 |
C14 |
C15 |
122.2 |
120.0 |
C14 |
C15 |
C16 |
117.8 |
120.0 |
C14 |
C15 |
O17 |
121.4 |
120.6 |
C14 |
O18 |
HO18 |
109.5 |
110.2 |
C16 |
C15 |
O17 |
120.8 |
119.4 |
C15 |
C16 |
H16 |
119.3 |
119.5 |
C15 |
O17 |
HO17 |
109.5 |
110.2 |
Torsion Angles for MYF
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C7 |
O22 |
C8 |
180.6 |
180.1 |
O22 |
C7 |
C6 |
C1 |
359.6 |
359.8 |
O22 |
C7 |
C6 |
C5 |
179.1 |
179.8 |
O22 |
C7 |
C8 |
C9 |
182.2 |
179.9 |
O22 |
C7 |
C8 |
H8 |
2.2 |
0.1 |
O22 |
C7 |
C6 |
C8 |
179.4 |
179.9 |
C6 |
C7 |
C8 |
C9 |
1.6 |
359.8 |
C6 |
C7 |
C8 |
H8 |
181.6 |
180.0 |
C1 |
C6 |
C7 |
C5 |
180.4 |
180.0 |
C7 |
C6 |
C1 |
O21 |
0.4 |
0.1 |
C7 |
C6 |
C1 |
C2 |
179.7 |
180.0 |
C7 |
C6 |
C5 |
C4 |
179.2 |
180.1 |
C7 |
C6 |
C5 |
O10 |
359.8 |
360.0 |
O22 |
C7 |
C8 |
C6 |
180.6 |
180.1 |
C8 |
C7 |
C6 |
C1 |
180.2 |
179.9 |
C8 |
C7 |
C6 |
C5 |
359.7 |
359.9 |
O10 |
C9 |
C8 |
C7 |
357.4 |
0.7 |
C7 |
C8 |
C9 |
C11 |
183.6 |
179.6 |
C9 |
C8 |
C7 |
H8 |
180.0 |
179.8 |
C1 |
C6 |
C7 |
C8 |
180.2 |
179.9 |
C7 |
C6 |
C1 |
C5 |
179.6 |
180.0 |
C1 |
C6 |
C5 |
C4 |
358.8 |
0.0 |
C1 |
C6 |
C5 |
O10 |
179.4 |
179.9 |
O21 |
C1 |
C6 |
C2 |
180.7 |
180.1 |
C6 |
C1 |
O21 |
HO21 |
287.2 |
99.2 |
C6 |
C1 |
C2 |
C3 |
0.4 |
360.0 |
C6 |
C1 |
C2 |
H2 |
180.4 |
180.0 |
C5 |
C6 |
C7 |
C8 |
359.7 |
359.9 |
C7 |
C6 |
C5 |
C1 |
180.4 |
180.0 |
C5 |
C6 |
C1 |
O21 |
180.8 |
180.1 |
C5 |
C6 |
C1 |
C2 |
0.1 |
360.0 |
C3 |
C4 |
C5 |
C6 |
1.9 |
360.0 |
C4 |
C5 |
C6 |
O10 |
179.4 |
180.1 |
C6 |
C5 |
C4 |
H4 |
181.9 |
179.9 |
C6 |
C5 |
O10 |
C9 |
359.3 |
0.5 |
O21 |
C1 |
C6 |
C5 |
180.8 |
180.1 |
C6 |
C1 |
O21 |
C2 |
179.3 |
179.9 |
O21 |
C1 |
C2 |
C3 |
179.7 |
179.9 |
O21 |
C1 |
C2 |
H2 |
359.7 |
359.9 |
C2 |
C1 |
C6 |
C5 |
0.1 |
360.0 |
C6 |
C1 |
C2 |
O21 |
180.7 |
180.1 |
C2 |
C1 |
O21 |
HO21 |
107.9 |
279.3 |
C3 |
C2 |
C1 |
H2 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
O20 |
179.4 |
179.9 |
C1 |
C2 |
C3 |
C4 |
0.2 |
0.0 |
HO21 |
O21 |
C1 |
C2 |
107.9 |
279.3 |
C1 |
C2 |
C3 |
H2 |
180.0 |
180.0 |
O20 |
C3 |
C2 |
C4 |
179.2 |
179.9 |
C2 |
C3 |
O20 |
HO20 |
4.7 |
115.2 |
C2 |
C3 |
C4 |
C5 |
358.6 |
0.0 |
C2 |
C3 |
C4 |
H4 |
178.6 |
180.0 |
C1 |
C2 |
H2 |
C3 |
180.0 |
180.0 |
H2 |
C2 |
C3 |
O20 |
359.4 |
359.9 |
H2 |
C2 |
C3 |
C4 |
180.2 |
180.0 |
O20 |
C3 |
C2 |
H2 |
359.4 |
359.9 |
C2 |
C3 |
O20 |
C4 |
180.8 |
180.1 |
O20 |
C3 |
C4 |
C5 |
179.4 |
180.1 |
O20 |
C3 |
C4 |
H4 |
359.4 |
0.1 |
C6 |
C5 |
C4 |
C3 |
1.9 |
360.0 |
C4 |
C3 |
C2 |
H2 |
180.2 |
180.0 |
C2 |
C3 |
C4 |
O20 |
179.2 |
179.9 |
C4 |
C3 |
O20 |
HO20 |
183.9 |
295.1 |
C3 |
C4 |
C5 |
O10 |
181.2 |
180.1 |
C5 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
HO20 |
O20 |
C3 |
C4 |
183.9 |
295.1 |
C6 |
C5 |
C4 |
O10 |
180.7 |
179.9 |
C3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
C4 |
C5 |
O10 |
C9 |
180.0 |
180.4 |
C6 |
C5 |
O10 |
C4 |
179.3 |
180.1 |
O10 |
C5 |
C4 |
H4 |
1.2 |
0.0 |
C5 |
O10 |
C9 |
C8 |
2.2 |
359.2 |
C5 |
O10 |
C9 |
C11 |
176.3 |
180.2 |
C3 |
C4 |
H4 |
C5 |
180.0 |
180.0 |
H4 |
C4 |
C5 |
O10 |
1.2 |
0.0 |
C7 |
C8 |
C9 |
O10 |
357.4 |
0.7 |
C8 |
C9 |
O10 |
C11 |
185.9 |
179.0 |
O10 |
C9 |
C8 |
H8 |
177.4 |
180.5 |
O10 |
C9 |
C11 |
C12 |
167.7 |
149.1 |
O10 |
C9 |
C11 |
C16 |
341.8 |
329.0 |
C7 |
C8 |
C9 |
H8 |
180.0 |
180.2 |
O10 |
C9 |
C8 |
C11 |
173.8 |
181.1 |
C8 |
C9 |
C11 |
C12 |
342.0 |
330.1 |
C8 |
C9 |
C11 |
C16 |
156.1 |
150.0 |
O10 |
C9 |
C11 |
C8 |
185.7 |
179.0 |
C11 |
C9 |
C8 |
H8 |
3.6 |
359.4 |
C12 |
C11 |
C9 |
C16 |
186.0 |
180.1 |
C9 |
C11 |
C12 |
C13 |
177.1 |
180.0 |
C9 |
C11 |
C12 |
H12 |
357.0 |
359.9 |
C9 |
C11 |
C16 |
C15 |
183.2 |
180.0 |
C9 |
C11 |
C16 |
H16 |
3.1 |
0.1 |
C7 |
C8 |
H8 |
C9 |
180.0 |
179.8 |
H8 |
C8 |
C9 |
C11 |
3.6 |
359.4 |
C9 |
C11 |
C12 |
C16 |
173.7 |
179.9 |
C12 |
C11 |
C16 |
C15 |
357.0 |
360.0 |
C12 |
C11 |
C16 |
H16 |
177.0 |
180.0 |
C13 |
C12 |
C11 |
H12 |
180.0 |
180.1 |
C11 |
C12 |
C13 |
O19 |
178.4 |
179.9 |
C11 |
C12 |
C13 |
C14 |
358.5 |
360.0 |
C9 |
C11 |
C16 |
C12 |
186.2 |
180.1 |
C16 |
C11 |
C12 |
C13 |
3.4 |
0.0 |
C16 |
C11 |
C12 |
H12 |
183.3 |
180.0 |
C14 |
C15 |
C16 |
C11 |
0.8 |
0.0 |
C11 |
C16 |
C15 |
O17 |
180.3 |
180.1 |
C15 |
C16 |
C11 |
H16 |
180.0 |
180.0 |
C13 |
C12 |
C11 |
C16 |
3.4 |
0.0 |
C11 |
C12 |
C13 |
H12 |
180.0 |
179.9 |
O19 |
C13 |
C12 |
C14 |
179.9 |
180.0 |
C12 |
C13 |
O19 |
HO19 |
186.6 |
13.7 |
C12 |
C13 |
C14 |
C15 |
359.4 |
0.0 |
C12 |
C13 |
C14 |
O18 |
180.1 |
179.8 |
H12 |
C12 |
C11 |
C16 |
183.3 |
180.0 |
C11 |
C12 |
H12 |
C13 |
180.0 |
180.1 |
H12 |
C12 |
C13 |
O19 |
358.4 |
0.0 |
H12 |
C12 |
C13 |
C14 |
178.5 |
180.0 |
O19 |
C13 |
C12 |
H12 |
358.4 |
0.0 |
C12 |
C13 |
O19 |
C14 |
180.1 |
180.0 |
O19 |
C13 |
C14 |
C15 |
179.6 |
180.1 |
O19 |
C13 |
C14 |
O18 |
0.2 |
359.9 |
C14 |
C13 |
C12 |
H12 |
178.5 |
180.0 |
C12 |
C13 |
C14 |
O19 |
179.9 |
180.0 |
C14 |
C13 |
O19 |
HO19 |
6.4 |
193.7 |
O18 |
C14 |
C13 |
C15 |
180.7 |
179.8 |
C13 |
C14 |
C15 |
C16 |
0.9 |
360.0 |
C13 |
C14 |
C15 |
O17 |
181.4 |
179.9 |
C13 |
C14 |
O18 |
HO18 |
178.1 |
108.3 |
HO19 |
O19 |
C13 |
C14 |
6.4 |
193.7 |
C11 |
C16 |
C15 |
C14 |
0.8 |
0.0 |
C13 |
C14 |
C15 |
O18 |
180.7 |
179.8 |
C15 |
C14 |
O18 |
HO18 |
358.8 |
288.1 |
C16 |
C15 |
C14 |
O17 |
179.5 |
180.0 |
C14 |
C15 |
C16 |
H16 |
180.8 |
180.0 |
C14 |
C15 |
O17 |
HO17 |
171.6 |
77.9 |
C13 |
C14 |
O18 |
C15 |
179.3 |
180.2 |
O18 |
C14 |
C15 |
C16 |
180.2 |
180.2 |
O18 |
C14 |
C15 |
O17 |
0.8 |
0.1 |
HO18 |
O18 |
C14 |
C15 |
358.8 |
288.1 |
C11 |
C16 |
C15 |
H16 |
180.0 |
180.0 |
C14 |
C15 |
C16 |
O17 |
180.5 |
180.0 |
C16 |
C15 |
O17 |
HO17 |
352.2 |
257.9 |
C14 |
C15 |
O17 |
C16 |
179.5 |
180.0 |
O17 |
C15 |
C16 |
H16 |
0.3 |
0.0 |
C11 |
C16 |
H16 |
C15 |
180.0 |
180.0 |
H16 |
C16 |
C15 |
O17 |
0.3 |
0.0 |