PDB Chemical Component MYC

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MYC

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.389	1.381
C1	C6	1.446	1.392
C1	H1	1.102	1.080
C2	C3	1.452	1.401
C2	O30	1.382	1.357
C3	C4	1.430	1.404
C3	C9	1.469	1.472
C4	C5	1.400	1.387
C4	O12	1.372	1.350
C5	C6	1.389	1.387
C5	H5	1.103	1.080
C6	O29	1.338	1.357
C9	C10	1.473	1.419
C9	O13	1.252	1.221
C10	C11	1.402	1.362
C10	O27	1.358	1.360
C11	C14	1.512	1.474
C11	O12	1.374	1.342
C14	C15	1.420	1.396
C14	C19	1.423	1.398
C15	C16	1.427	1.383
C15	H15	1.103	1.079
C16	C17	1.414	1.391
C16	O25	1.364	1.360
C17	C18	1.410	1.392
C17	O24	1.358	1.359
C18	C19	1.407	1.383
C18	O23	1.351	1.360
C19	H19	1.103	1.080
O23	HO3	0.950	0.967
O24	HO4	0.951	0.967
O25	HO5	0.950	0.967
O27	HO7	0.950	0.967
O29	HO9	0.950	0.967
O30	HO0	0.950	0.966

Bond Angles for MYC

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	118.8	120.2
C2	C1	H1	118.7	120.0
C1	C2	C3	121.9	119.5
C1	C2	O30	119.1	120.2
C6	C1	H1	122.6	119.9
C1	C6	C5	120.7	120.6
C1	C6	O29	115.0	119.7
C3	C2	O30	119.0	120.3
C2	C3	C4	116.6	120.3
C2	C3	C9	124.6	121.2
C2	O30	HO0	119.1	106.8
C4	C3	C9	118.7	118.5
C3	C4	C5	121.9	119.4
C3	C4	O12	121.0	119.8
C3	C9	C10	116.9	117.4
C3	C9	O13	123.0	121.3
C5	C4	O12	117.0	120.7
C4	C5	C6	120.0	120.0
C4	C5	H5	120.4	120.1
C4	O12	C11	122.6	122.3
C6	C5	H5	119.6	119.9
C5	C6	O29	124.3	119.7
C6	O29	HO9	115.0	106.8
C10	C9	O13	120.2	121.3
C9	C10	C11	120.5	119.4
C9	C10	O27	116.2	120.2
C11	C10	O27	123.3	120.3
C10	C11	C14	128.3	118.7
C10	C11	O12	120.3	122.5
C10	O27	HO7	116.2	106.8
C14	C11	O12	111.3	118.8
C11	C14	C15	118.9	120.2
C11	C14	C19	122.4	120.0
C15	C14	C19	118.7	119.8
C14	C15	C16	120.5	120.0
C14	C15	H15	119.5	120.0
C14	C19	C18	119.9	119.9
C14	C19	H19	120.6	120.0
C16	C15	H15	120.0	120.0
C15	C16	C17	120.5	120.1
C15	C16	O25	122.3	120.0
C17	C16	O25	117.2	119.9
C16	C17	C18	118.2	120.1
C16	C17	O24	117.7	120.0
C16	O25	HO5	122.2	106.8
C18	C17	O24	124.1	119.9
C17	C18	C19	122.1	120.1
C17	C18	O23	121.5	120.0
C17	O24	HO4	117.7	106.8
C19	C18	O23	116.4	119.9
C18	C19	H19	119.5	120.1
C18	O23	HO3	121.5	106.8

Torsion Angles for MYC

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C6	C1	C2	H1	180.1	180.0
C2	C1	C6	C5	357.9	0.3
C2	C1	C6	O29	179.2	180.0
C3	C2	C1	O30	183.1	180.0
C1	C2	C3	C4	356.3	0.0
C1	C2	C3	C9	180.3	180.0
C1	C2	O30	HO0	179.9	90.0
C2	C1	C6	H1	179.9	180.0
C6	C1	C2	C3	2.9	0.0
C6	C1	C2	O30	179.8	180.0
C4	C5	C6	C1	2.1	359.4
C1	C6	C5	H5	182.0	179.7
C5	C6	C1	O29	178.7	180.3
C1	C6	O29	HO9	180.1	90.0
C2	C1	H1	C6	180.1	180.0
H1	C1	C2	C3	182.9	180.0
H1	C1	C2	O30	359.7	0.0
H1	C1	C6	C5	178.0	180.3
H1	C1	C6	O29	359.3	360.0
C3	C2	C1	C6	2.9	0.0
C3	C2	C1	H1	182.9	180.0
C1	C2	C3	O30	176.9	180.0
C3	C2	O30	HO0	356.9	270.1
C4	C3	C2	C9	176.0	180.0
C2	C3	C4	C5	3.7	359.7
C2	C3	C4	O12	180.9	180.0
C2	C3	C9	C10	177.9	180.0
C2	C3	C9	O13	357.0	360.0
O30	C2	C1	C6	179.8	180.0
O30	C2	C1	H1	359.7	0.0
C1	C2	O30	C3	183.0	180.0
O30	C2	C3	C4	179.4	180.0
O30	C2	C3	C9	3.4	360.0
C4	C3	C2	O30	179.4	180.0
C2	C3	C4	C9	183.8	180.0
C4	C3	C9	C10	1.9	360.0
C4	C3	C9	O13	181.1	180.0
C5	C4	C3	O12	182.8	179.7
C3	C4	C5	C6	356.9	0.6
C3	C4	C5	H5	177.0	180.3
C3	C4	O12	C11	1.5	0.0
C9	C3	C2	O30	3.4	360.0
C2	C3	C9	C4	175.9	180.0
C9	C3	C4	C5	180.0	179.7
C9	C3	C4	O12	357.1	360.0
C10	C9	C3	O13	180.8	180.0
C3	C9	C10	C11	0.3	0.0
C3	C9	C10	O27	178.6	180.0
C1	C6	C5	C4	2.1	359.4
C5	C4	C3	C9	180.0	179.7
C3	C4	C5	O12	177.3	180.3
C5	C4	O12	C11	178.8	180.3
C6	C5	C4	H5	179.9	180.3
C4	C5	C6	O29	180.7	179.7
O12	C4	C3	C9	357.1	360.0
C3	C4	O12	C5	182.7	179.7
O12	C4	C5	C6	179.7	180.3
O12	C4	C5	H5	359.8	0.0
C10	C11	O12	C4	0.8	360.0
C14	C11	O12	C4	179.0	179.9
C5	C6	C1	H1	178.0	180.3
C1	C6	C5	O29	181.4	179.7
C6	C5	C4	O12	179.7	180.3
C4	C5	C6	H5	180.1	179.7
C5	C6	O29	HO9	1.4	269.7
H5	C5	C4	O12	359.8	0.0
C4	C5	H5	C6	179.9	180.3
H5	C5	C6	O29	0.6	360.0
O29	C6	C1	H1	359.3	360.0
C1	C6	O29	C5	178.6	180.3
O29	C6	C5	H5	0.6	360.0
C3	C9	C10	O13	179.2	180.0
C11	C10	C9	O27	181.6	180.0
C9	C10	C11	C14	180.5	180.0
C9	C10	C11	O12	358.4	0.0
C9	C10	O27	HO7	180.0	360.0
C3	C9	O13	C10	180.9	180.0
O13	C9	C10	C11	181.1	180.0
O13	C9	C10	O27	359.4	360.0
C4	O12	C11	C10	0.8	360.0
C11	C10	C9	O13	181.1	180.0
C9	C10	C11	O27	178.3	180.0
C11	C10	O27	HO7	358.3	179.9
C14	C11	C10	O12	182.2	180.0
C10	C11	C14	C15	169.9	47.5
C10	C11	C14	C19	349.6	227.2
O27	C10	C9	O13	359.4	360.0
C9	C10	O27	C11	181.7	180.0
O27	C10	C11	C14	2.3	0.1
O27	C10	C11	O12	180.1	180.0
C4	O12	C11	C14	179.0	179.9
C14	C11	C10	O27	2.3	0.1
C10	C11	C14	O12	178.0	180.0
C15	C14	C11	C19	180.3	180.3
C11	C14	C15	C16	179.2	180.0
C11	C14	C15	H15	359.2	360.0
C11	C14	C19	C18	180.8	179.8
C11	C14	C19	H19	0.9	0.3
O12	C11	C10	O27	180.1	180.0
C10	C11	O12	C14	181.8	180.0
O12	C11	C14	C15	351.9	227.5
O12	C11	C14	C19	171.7	47.2
C15	C14	C11	O12	351.9	227.5
C11	C14	C15	C19	179.7	179.7
C15	C14	C19	C18	0.5	359.5
C15	C14	C19	H19	180.6	180.0
C16	C15	C14	H15	180.0	180.0
C14	C15	C16	C17	1.1	360.0
C14	C15	C16	O25	179.8	180.1
C19	C14	C11	O12	171.7	47.2
C11	C14	C19	C15	180.3	180.3
C19	C14	C15	C16	359.5	0.3
C19	C14	C15	H15	179.4	180.2
C17	C18	C19	C14	359.0	0.5
C14	C19	C18	O23	180.2	180.3
C18	C19	C14	H19	179.9	179.5
C16	C15	C14	C19	359.5	0.3
C14	C15	C16	H15	180.0	180.0
C17	C16	C15	O25	181.3	179.9
C15	C16	C17	C18	358.5	360.0
C15	C16	C17	O24	180.0	180.0
C15	C16	O25	HO5	180.1	89.9
H15	C15	C14	C19	179.4	180.2
C14	C15	H15	C16	180.0	180.0
H15	C15	C16	C17	181.1	180.0
H15	C15	C16	O25	359.8	0.1
C17	C16	C15	H15	181.1	180.0
C15	C16	C17	O25	178.8	180.1
C17	C16	O25	HO5	358.8	270.0
C18	C17	C16	O24	178.5	179.9
C16	C17	C18	C19	1.5	359.8
C16	C17	C18	O23	180.2	180.0
C16	C17	O24	HO4	180.0	90.0
O25	C16	C15	H15	359.8	0.1
C15	C16	O25	C17	181.2	179.9
O25	C16	C17	C18	179.7	179.9
O25	C16	C17	O24	1.2	360.0
C14	C19	C18	C17	359.0	0.5
C18	C17	C16	O25	179.7	179.9
C16	C17	C18	O24	181.6	180.1
C18	C17	O24	HO4	1.7	270.1
C19	C18	C17	O23	181.3	179.8
C17	C18	C19	H19	178.9	179.9
C17	C18	O23	HO3	180.0	90.1
O24	C17	C16	O25	1.2	360.0
C16	C17	O24	C18	178.4	179.9
O24	C17	C18	C19	179.9	179.7
O24	C17	C18	O23	358.6	359.9
C14	C19	C18	H19	180.1	180.5
C19	C18	C17	O24	179.9	179.7
C17	C18	C19	O23	178.7	180.2
C19	C18	O23	HO3	358.8	270.2
O23	C18	C17	O24	358.6	359.9
C17	C18	O23	C19	181.2	179.8
O23	C18	C19	H19	0.1	359.8
C14	C19	H19	C18	179.9	179.5
H19	C19	C18	O23	0.1	359.8