PDB Chemical Component MXD

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MXD

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
NAO	CAE	1.347	1.388
NAO	HAO1	1.000	0.970
NAO	HAO2	1.000	0.971
CAE	CAF	1.382	1.392
CAE	NAC	1.409	1.331
CAF	CAD	1.397	1.391
CAF	HAF	1.080	1.080
NAC	OAN	1.351	1.416
NAC	CAA	1.398	1.324
CAA	NAM	1.360	1.386
CAA	NAB	1.372	1.325
NAM	HAM1	1.000	0.970
NAM	HAM2	1.000	0.970
NAB	CAD	1.372	1.331
CAD	NAI	1.400	1.388
NAI	CAG	1.455	1.466
NAI	CAK	1.468	1.466
CAG	CAH	1.532	1.531
CAG	HAG1	1.100	1.090
CAG	HAG2	1.100	1.090
CAK	CAL	1.530	1.530
CAK	HAK1	1.100	1.090
CAK	HAK2	1.100	1.091
CAL	CAJ	1.530	1.531
CAL	HAL1	1.100	1.090
CAL	HAL2	1.100	1.090
CAJ	CAH	1.536	1.532
CAJ	HAJ1	1.099	1.091
CAJ	HAJ2	1.100	1.090
CAH	HAH1	1.100	1.089
CAH	HAH2	1.100	1.090

Bond Angles for MXD

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
CAE	NAO	HAO1	109.5	120.0
CAE	NAO	HAO2	109.5	120.0
NAO	CAE	CAF	122.0	120.5
NAO	CAE	NAC	118.3	120.4
HAO1	NAO	HAO2	109.4	120.0
CAF	CAE	NAC	119.8	119.1
CAE	CAF	CAD	119.0	118.5
CAE	CAF	HAF	120.5	120.8
CAE	NAC	OAN	119.1	119.6
CAE	NAC	CAA	120.0	120.8
CAD	CAF	HAF	120.5	120.7
CAF	CAD	NAB	121.2	119.1
CAF	CAD	NAI	116.6	120.5
OAN	NAC	CAA	120.9	119.6
NAC	CAA	NAM	117.2	119.2
NAC	CAA	NAB	119.5	121.7
NAM	CAA	NAB	123.3	119.1
CAA	NAM	HAM1	125.5	120.0
CAA	NAM	HAM2	109.1	119.9
CAA	NAB	CAD	120.6	120.8
HAM1	NAM	HAM2	125.5	120.0
NAB	CAD	NAI	122.3	120.4
CAD	NAI	CAG	121.7	106.7
CAD	NAI	CAK	118.7	106.7
CAG	NAI	CAK	119.6	107.4
NAI	CAG	CAH	107.5	109.8
NAI	CAG	HAG1	110.6	109.5
NAI	CAG	HAG2	110.1	109.5
NAI	CAK	CAL	108.9	109.8
NAI	CAK	HAK1	109.8	109.5
NAI	CAK	HAK2	109.7	109.4
CAH	CAG	HAG1	110.5	109.4
CAH	CAG	HAG2	110.2	109.4
CAG	CAH	CAJ	110.0	109.2
CAG	CAH	HAH1	109.2	109.5
CAG	CAH	HAH2	109.3	109.5
HAG1	CAG	HAG2	108.0	109.3
CAL	CAK	HAK1	109.8	109.4
CAL	CAK	HAK2	109.7	109.4
CAK	CAL	CAJ	109.9	109.2
CAK	CAL	HAL1	109.2	109.5
CAK	CAL	HAL2	109.3	109.5
HAK1	CAK	HAK2	109.1	109.4
CAJ	CAL	HAL1	109.2	109.5
CAJ	CAL	HAL2	109.3	109.5
CAL	CAJ	CAH	110.7	109.0
CAL	CAJ	HAJ1	108.8	109.6
CAL	CAJ	HAJ2	109.1	109.6
HAL1	CAL	HAL2	109.8	109.5
CAH	CAJ	HAJ1	108.8	109.5
CAH	CAJ	HAJ2	109.1	109.5
CAJ	CAH	HAH1	109.2	109.6
CAJ	CAH	HAH2	109.3	109.5
HAJ1	CAJ	HAJ2	110.4	109.6
HAH1	CAH	HAH2	109.9	109.6

Torsion Angles for MXD

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
HAO1	NAO	CAE	HAO2	120.0	180.3
CAF	CAE	NAO	NAC	181.3	180.3
NAO	CAE	CAF	CAD	180.6	180.0
NAO	CAE	CAF	HAF	0.7	360.0
NAO	CAE	NAC	OAN	0.2	0.3
NAO	CAE	NAC	CAA	178.7	179.7
CAE	NAO	HAO1	HAO2	240.0	179.7
HAO1	NAO	CAE	CAF	162.6	0.0
HAO1	NAO	CAE	NAC	341.3	179.7
CAE	NAO	HAO2	HAO1	120.0	180.3
HAO2	NAO	CAE	CAF	42.7	179.8
HAO2	NAO	CAE	NAC	221.4	359.4
CAF	CAE	NAO	HAO1	162.6	0.0
CAF	CAE	NAO	HAO2	42.7	179.8
NAO	CAE	CAF	NAC	178.7	179.7
CAF	CAE	NAC	OAN	178.9	180.0
CAF	CAE	NAC	CAA	357.5	359.4
CAD	CAF	CAE	HAF	180.0	180.0
CAE	CAF	CAD	NAB	359.8	0.0
CAE	CAF	CAD	NAI	178.7	180.0
NAC	CAE	NAO	HAO1	341.3	179.7
NAC	CAE	NAO	HAO2	221.4	359.4
NAO	CAE	NAC	CAF	181.3	180.3
NAC	CAE	CAF	CAD	2.0	0.3
NAC	CAE	CAF	HAF	182.0	180.3
OAN	NAC	CAE	CAA	181.5	180.6
CAE	NAC	CAA	NAM	181.8	180.3
CAE	NAC	CAA	NAB	1.4	0.6
CAD	CAF	CAE	NAC	2.0	0.3
CAE	CAF	CAD	HAF	180.0	180.0
CAA	NAB	CAD	CAF	359.0	360.0
NAB	CAD	CAF	NAI	181.1	180.1
CAF	CAD	NAI	CAG	178.0	180.0
CAF	CAD	NAI	CAK	356.4	65.5
HAF	CAF	CAE	NAC	182.0	180.3
CAE	CAF	HAF	CAD	180.0	180.0
HAF	CAF	CAD	NAB	179.8	180.0
HAF	CAF	CAD	NAI	358.6	360.0
CAE	NAC	OAN	CAA	178.5	179.4
OAN	NAC	CAA	NAM	0.4	359.7
OAN	NAC	CAA	NAB	179.9	180.0
CAE	NAC	CAA	OAN	181.5	180.6
NAM	CAA	NAC	NAB	180.5	179.7
NAC	CAA	NAM	HAM1	179.8	180.2
NAC	CAA	NAM	HAM2	359.8	0.3
NAC	CAA	NAB	CAD	0.4	359.8
NAC	CAA	NAM	NAB	179.5	180.3
NAM	CAA	NAB	CAD	179.9	180.0
HAM1	NAM	CAA	HAM2	180.0	179.9
CAF	CAD	NAB	CAA	359.0	360.0
NAC	CAA	NAB	NAM	180.5	179.7
NAB	CAA	NAM	HAM1	0.3	360.0
NAB	CAA	NAM	HAM2	180.3	180.0
CAA	NAB	CAD	NAI	180.2	180.0
HAM1	NAM	CAA	NAB	0.3	360.0
CAA	NAM	HAM1	HAM2	180.0	180.1
HAM2	NAM	CAA	NAB	180.3	180.0
CAA	NAM	HAM2	HAM1	180.0	179.9
NAB	CAD	CAF	HAF	179.8	180.0
CAF	CAD	NAB	NAI	178.8	179.9
NAB	CAD	NAI	CAG	356.8	360.0
NAB	CAD	NAI	CAK	175.2	245.4
NAI	CAD	CAF	HAF	358.6	360.0
CAF	CAD	NAI	NAB	181.2	180.1
CAG	NAI	CAD	CAK	181.6	114.5
CAD	NAI	CAG	CAH	122.5	180.3
CAD	NAI	CAG	HAG1	1.7	300.4
CAD	NAI	CAG	HAG2	242.5	60.2
CAD	NAI	CAK	CAL	236.5	179.7
CAD	NAI	CAK	HAK1	116.3	299.8
CAD	NAI	CAK	HAK2	356.4	59.7
CAD	NAI	CAG	CAK	178.4	246.0
CAG	NAI	CAK	CAL	54.9	65.6
CAG	NAI	CAK	HAK1	294.7	185.8
CAG	NAI	CAK	HAK2	174.9	305.6
CAH	CAG	NAI	HAG1	120.8	239.9
CAH	CAG	NAI	HAG2	240.0	120.1
NAI	CAG	CAH	CAJ	54.8	61.3
NAI	CAG	CAH	HAH1	295.1	181.3
NAI	CAG	CAH	HAH2	174.9	301.5
HAG1	CAG	NAI	HAG2	119.2	240.2
CAD	NAI	CAK	CAG	181.6	114.1
CAK	NAI	CAG	CAH	304.1	294.4
CAK	NAI	CAG	HAG1	183.3	54.4
CAK	NAI	CAG	HAG2	64.1	174.2
CAL	CAK	NAI	HAK1	120.2	239.9
CAL	CAK	NAI	HAK2	240.0	120.0
NAI	CAK	CAL	CAJ	308.0	298.7
NAI	CAK	CAL	HAL1	188.2	178.7
NAI	CAK	CAL	HAL2	68.0	58.6
HAK1	CAK	NAI	HAK2	119.8	240.2
CAH	CAG	NAI	CAK	304.1	294.4
NAI	CAG	CAH	HAG1	239.2	120.1
NAI	CAG	CAH	HAG2	120.0	239.9
HAG1	CAG	CAH	HAG2	240.8	119.8
CAL	CAJ	CAH	CAG	300.7	304.5
CAG	CAH	CAJ	HAJ1	60.2	64.3
CAG	CAH	CAJ	HAJ2	180.7	184.5
CAJ	CAH	CAG	HAH1	119.8	240.0
CAJ	CAH	CAG	HAH2	240.0	119.9
HAH1	CAH	CAG	HAH2	120.2	239.9
HAG1	CAG	NAI	CAK	183.3	54.4
NAI	CAG	HAG1	CAH	118.9	239.7
NAI	CAG	HAG1	HAG2	239.5	119.9
CAH	CAG	HAG1	HAG2	120.5	240.2
HAG1	CAG	CAH	CAJ	175.6	301.2
HAG1	CAG	CAH	HAH1	55.9	61.2
HAG1	CAG	CAH	HAH2	295.7	181.3
HAG2	CAG	NAI	CAK	64.1	174.2
NAI	CAG	HAG2	CAH	241.6	120.3
NAI	CAG	HAG2	HAG1	120.8	240.1
CAH	CAG	HAG2	HAG1	239.2	119.8
HAG2	CAG	CAH	CAJ	294.9	181.5
HAG2	CAG	CAH	HAH1	175.1	301.4
HAG2	CAG	CAH	HAH2	54.9	61.6
NAI	CAK	CAL	HAK1	239.8	120.2
NAI	CAK	CAL	HAK2	120.0	239.9
HAK1	CAK	CAL	HAK2	240.2	119.8
CAJ	CAL	CAK	HAL1	119.8	120.0
CAJ	CAL	CAK	HAL2	240.0	240.1
CAK	CAL	CAJ	CAH	57.5	55.6
CAK	CAL	CAJ	HAJ1	298.0	295.8
CAK	CAL	CAJ	HAJ2	177.5	175.4
HAL1	CAL	CAK	HAL2	120.2	120.1
NAI	CAK	HAK1	CAL	119.7	239.7
NAI	CAK	HAK1	HAK2	239.8	119.9
CAL	CAK	HAK1	HAK2	120.1	240.2
HAK1	CAK	CAL	CAJ	68.2	178.5
HAK1	CAK	CAL	HAL1	308.4	58.5
HAK1	CAK	CAL	HAL2	188.2	298.4
NAI	CAK	HAK2	CAL	240.5	120.3
NAI	CAK	HAK2	HAK1	120.2	240.1
CAL	CAK	HAK2	HAK1	239.8	119.8
HAK2	CAK	CAL	CAJ	188.0	58.7
HAK2	CAK	CAL	HAL1	68.2	298.7
HAK2	CAK	CAL	HAL2	308.0	178.6
CAG	CAH	CAJ	CAL	300.7	304.5
CAJ	CAL	CAK	HAK1	68.2	178.5
CAJ	CAL	CAK	HAK2	188.0	58.7
CAK	CAL	CAJ	HAL1	240.2	240.0
CAK	CAL	CAJ	HAL2	120.0	120.0
HAL1	CAL	CAJ	HAL2	239.8	239.9
CAH	CAJ	CAL	HAJ1	119.5	119.8
CAH	CAJ	CAL	HAJ2	240.0	240.1
CAL	CAJ	CAH	HAH1	60.5	184.5
CAL	CAJ	CAH	HAH2	180.7	64.3
HAJ1	CAJ	CAL	HAJ2	120.5	120.3
HAL1	CAL	CAK	HAK1	308.4	58.5
HAL1	CAL	CAK	HAK2	68.2	298.7
CAK	CAL	HAL1	CAJ	120.2	119.8
CAK	CAL	HAL1	HAL2	240.1	239.9
CAJ	CAL	HAL1	HAL2	119.9	120.1
HAL1	CAL	CAJ	CAH	177.3	175.5
HAL1	CAL	CAJ	HAJ1	57.8	55.7
HAL1	CAL	CAJ	HAJ2	297.3	295.4
HAL2	CAL	CAK	HAK1	188.2	298.4
HAL2	CAL	CAK	HAK2	308.0	178.6
CAK	CAL	HAL2	CAJ	239.6	240.2
CAK	CAL	HAL2	HAL1	119.8	120.1
CAJ	CAL	HAL2	HAL1	240.2	239.9
HAL2	CAL	CAJ	CAH	297.5	295.6
HAL2	CAL	CAJ	HAJ1	178.0	175.8
HAL2	CAL	CAJ	HAJ2	57.5	55.5
CAJ	CAH	CAG	HAG1	175.6	301.2
CAJ	CAH	CAG	HAG2	294.9	181.5
CAG	CAH	CAJ	HAH1	240.2	119.9
CAG	CAH	CAJ	HAH2	120.0	240.2
CAH	CAJ	CAL	HAL1	177.3	175.5
CAH	CAJ	CAL	HAL2	297.5	295.6
CAL	CAJ	CAH	HAJ1	240.5	240.2
CAL	CAJ	CAH	HAJ2	120.0	119.9
HAJ1	CAJ	CAH	HAJ2	239.5	239.8
HAH1	CAH	CAJ	HAH2	239.8	120.2
HAJ1	CAJ	CAL	HAL1	57.8	55.7
HAJ1	CAJ	CAL	HAL2	178.0	175.8
CAL	CAJ	HAJ1	CAH	120.7	119.5
CAL	CAJ	HAJ1	HAJ2	240.3	239.7
CAH	CAJ	HAJ1	HAJ2	119.7	120.2
HAJ1	CAJ	CAH	HAH1	180.0	304.4
HAJ1	CAJ	CAH	HAH2	300.1	184.1
HAJ2	CAJ	CAL	HAL1	297.3	295.4
HAJ2	CAJ	CAL	HAL2	57.5	55.5
CAL	CAJ	HAJ2	CAH	239.0	240.5
CAL	CAJ	HAJ2	HAJ1	119.5	120.3
CAH	CAJ	HAJ2	HAJ1	240.5	239.8
HAJ2	CAJ	CAH	HAH1	300.5	64.6
HAJ2	CAJ	CAH	HAH2	60.6	304.4
HAH1	CAH	CAG	HAG1	55.9	61.2
HAH1	CAH	CAG	HAG2	175.1	301.4
CAG	CAH	HAH1	CAJ	120.3	240.3
CAG	CAH	HAH1	HAH2	240.1	120.1
HAH1	CAH	CAJ	HAJ1	180.0	304.4
HAH1	CAH	CAJ	HAJ2	300.5	64.6
CAJ	CAH	HAH1	HAH2	119.8	239.8
HAH2	CAH	CAG	HAG1	295.7	181.3
HAH2	CAH	CAG	HAG2	54.9	61.6
CAG	CAH	HAH2	CAJ	239.6	119.7
CAG	CAH	HAH2	HAH1	119.8	239.9
HAH2	CAH	CAJ	HAJ1	300.1	184.1
HAH2	CAH	CAJ	HAJ2	60.6	304.4
CAJ	CAH	HAH2	HAH1	240.2	120.2