PDB Chemical Component MVM
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MVM
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C4 |
C7 |
1.525 |
1.530 |
C4 |
N2 |
1.478 |
1.469 |
C7 |
C3 |
1.481 |
1.531 |
N2 |
C1 |
1.467 |
1.468 |
C3 |
C9 |
1.495 |
1.531 |
C1 |
C9 |
1.534 |
1.531 |
C9 |
N1 |
1.489 |
1.465 |
C8 |
N3 |
1.316 |
1.319 |
C8 |
C10 |
1.382 |
1.381 |
N3 |
C6 |
1.307 |
1.324 |
C10 |
C11 |
1.376 |
1.388 |
C6 |
N1 |
1.450 |
1.393 |
C6 |
C2 |
1.382 |
1.391 |
N1 |
C5 |
1.459 |
1.349 |
C11 |
C2 |
1.370 |
1.385 |
C2 |
CL |
1.774 |
1.736 |
C5 |
O1 |
1.184 |
1.216 |
C5 |
C12 |
1.536 |
1.476 |
C12 |
C17 |
1.387 |
1.398 |
C12 |
C13 |
1.373 |
1.397 |
C17 |
C16 |
1.373 |
1.378 |
C13 |
C14 |
1.372 |
1.377 |
C16 |
C15 |
1.368 |
1.391 |
C14 |
C15 |
1.368 |
1.390 |
C15 |
N4 |
1.426 |
1.398 |
N4 |
N5 |
1.302 |
1.402 |
N4 |
C22 |
1.368 |
1.376 |
N5 |
N6 |
1.313 |
1.287 |
C22 |
N7 |
1.340 |
1.325 |
C22 |
C18 |
1.397 |
1.407 |
N6 |
C18 |
1.379 |
1.352 |
N7 |
C21 |
1.330 |
1.316 |
C18 |
C19 |
1.410 |
1.403 |
C21 |
C20 |
1.410 |
1.387 |
C19 |
C20 |
1.401 |
1.370 |
C7 |
H1 |
1.100 |
1.090 |
C7 |
H2 |
1.099 |
1.090 |
C13 |
H3 |
1.080 |
1.080 |
C20 |
H4 |
1.080 |
1.081 |
C8 |
H5 |
1.080 |
1.081 |
C16 |
H6 |
1.080 |
1.080 |
C19 |
H7 |
1.080 |
1.080 |
C3 |
H8 |
1.100 |
1.090 |
C3 |
H9 |
1.100 |
1.090 |
C1 |
H10 |
1.100 |
1.090 |
C1 |
H11 |
1.100 |
1.090 |
C11 |
H12 |
1.080 |
1.080 |
C14 |
H13 |
1.080 |
1.080 |
C10 |
H14 |
1.080 |
1.081 |
C4 |
H15 |
1.100 |
1.090 |
C4 |
H16 |
1.100 |
1.091 |
C9 |
H17 |
1.101 |
1.090 |
N2 |
H18 |
1.000 |
1.009 |
C17 |
H20 |
1.081 |
1.079 |
C21 |
H21 |
1.080 |
1.081 |
Bond Angles for MVM
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C4 |
C7 |
H1 |
108.8 |
109.5 |
C4 |
C7 |
H2 |
108.8 |
109.5 |
N2 |
C4 |
H15 |
109.7 |
109.5 |
N2 |
C4 |
H16 |
109.7 |
109.4 |
C4 |
N2 |
H18 |
109.3 |
111.0 |
C7 |
C3 |
C9 |
119.4 |
109.2 |
C3 |
C7 |
H1 |
108.9 |
109.5 |
C3 |
C7 |
H2 |
108.8 |
109.5 |
C7 |
C3 |
H8 |
106.9 |
109.5 |
C7 |
C3 |
H9 |
106.9 |
109.5 |
N2 |
C1 |
H10 |
108.1 |
109.5 |
N2 |
C1 |
H11 |
108.1 |
109.5 |
C3 |
C9 |
C1 |
113.2 |
109.3 |
C3 |
C9 |
N1 |
109.3 |
109.5 |
C9 |
C3 |
H8 |
106.9 |
109.5 |
C9 |
C3 |
H9 |
106.9 |
109.5 |
C3 |
C9 |
H17 |
109.2 |
109.5 |
C1 |
C9 |
N1 |
106.9 |
109.5 |
C9 |
C1 |
H10 |
108.1 |
109.4 |
C9 |
C1 |
H11 |
108.1 |
109.5 |
C1 |
C9 |
H17 |
108.8 |
109.5 |
C6 |
N1 |
C9 |
122.0 |
120.0 |
N1 |
C9 |
H17 |
109.4 |
109.5 |
C10 |
C8 |
N3 |
121.0 |
120.9 |
N3 |
C8 |
H5 |
119.5 |
119.6 |
C8 |
C10 |
C11 |
119.0 |
119.3 |
C10 |
C8 |
H5 |
119.5 |
119.5 |
C8 |
C10 |
H14 |
120.5 |
120.4 |
C10 |
C11 |
H12 |
121.2 |
120.8 |
C2 |
C6 |
N1 |
120.0 |
119.7 |
C6 |
N1 |
C5 |
117.8 |
120.0 |
C6 |
C2 |
CL |
121.1 |
120.4 |
N1 |
C5 |
O1 |
120.2 |
120.0 |
C11 |
C2 |
CL |
118.1 |
120.4 |
C5 |
C12 |
C17 |
122.3 |
120.0 |
C12 |
C17 |
H20 |
119.8 |
120.0 |
C12 |
C13 |
C14 |
120.1 |
119.9 |
C12 |
C13 |
H3 |
119.9 |
120.0 |
C17 |
C16 |
H6 |
120.8 |
119.9 |
C13 |
C14 |
C15 |
119.1 |
120.1 |
C14 |
C13 |
H3 |
119.9 |
120.1 |
C13 |
C14 |
H13 |
120.4 |
120.0 |
C16 |
C15 |
N4 |
118.5 |
119.9 |
C15 |
C16 |
H6 |
120.8 |
120.0 |
C15 |
N4 |
N5 |
125.0 |
126.6 |
N4 |
N5 |
N6 |
109.4 |
109.5 |
N4 |
C22 |
N7 |
134.2 |
133.8 |
N4 |
C22 |
C18 |
104.7 |
105.9 |
N5 |
N6 |
C18 |
108.7 |
110.1 |
N7 |
C22 |
C18 |
121.2 |
120.4 |
C22 |
N7 |
C21 |
122.6 |
121.4 |
C22 |
C18 |
N6 |
106.4 |
107.8 |
N7 |
C21 |
H21 |
120.1 |
119.3 |
C18 |
C19 |
H7 |
120.1 |
120.8 |
C21 |
C20 |
H4 |
120.6 |
120.1 |
C19 |
C20 |
H4 |
120.5 |
120.1 |
H1 |
C7 |
H2 |
109.5 |
109.5 |
H8 |
C3 |
H9 |
109.5 |
109.5 |
H10 |
C1 |
H11 |
109.5 |
109.5 |
H15 |
C4 |
H16 |
109.5 |
109.4 |
Torsion Angles for MVM
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C4 |
C7 |
C3 |
C9 |
38.5 |
57.7 |
C3 |
C7 |
C4 |
H1 |
239.6 |
119.9 |
C3 |
C7 |
C4 |
H2 |
120.4 |
240.0 |
C4 |
C7 |
C3 |
H8 |
159.9 |
177.6 |
C4 |
C7 |
C3 |
H9 |
277.1 |
297.7 |
H1 |
C7 |
C4 |
H2 |
240.8 |
120.1 |
N2 |
C4 |
C7 |
H1 |
64.3 |
180.9 |
N2 |
C4 |
C7 |
H2 |
183.5 |
60.8 |
C4 |
N2 |
C1 |
H10 |
64.2 |
178.3 |
C4 |
N2 |
C1 |
H11 |
182.7 |
58.3 |
H15 |
C4 |
N2 |
H16 |
120.3 |
119.9 |
C4 |
C7 |
C3 |
H1 |
120.4 |
240.1 |
C4 |
C7 |
C3 |
H2 |
239.6 |
120.0 |
C7 |
C3 |
C9 |
C1 |
332.3 |
302.3 |
C7 |
C3 |
C9 |
N1 |
213.2 |
182.4 |
C9 |
C3 |
C7 |
H8 |
238.6 |
240.1 |
C9 |
C3 |
C7 |
H9 |
121.4 |
119.9 |
C7 |
C3 |
C9 |
H17 |
93.6 |
62.3 |
H1 |
C7 |
C3 |
H2 |
119.2 |
239.9 |
H8 |
C3 |
C7 |
H9 |
242.8 |
239.9 |
C9 |
C1 |
N2 |
H10 |
239.2 |
120.0 |
C9 |
C1 |
N2 |
H11 |
120.8 |
240.0 |
N2 |
C1 |
C9 |
H17 |
274.4 |
299.3 |
H10 |
C1 |
N2 |
H11 |
241.6 |
120.0 |
C9 |
C3 |
C7 |
H1 |
278.1 |
177.6 |
C9 |
C3 |
C7 |
H2 |
158.9 |
297.7 |
C7 |
C3 |
C9 |
H8 |
121.4 |
119.9 |
C7 |
C3 |
C9 |
H9 |
238.6 |
240.1 |
C1 |
C9 |
C3 |
N1 |
119.0 |
119.9 |
C3 |
C9 |
C1 |
H10 |
275.2 |
179.2 |
C3 |
C9 |
C1 |
H11 |
156.8 |
299.2 |
C1 |
C9 |
C3 |
H17 |
238.6 |
240.0 |
C6 |
N1 |
C9 |
C3 |
18.3 |
240.0 |
N1 |
C9 |
C3 |
H17 |
119.6 |
120.1 |
H8 |
C3 |
C9 |
H9 |
117.2 |
120.2 |
N2 |
C1 |
C9 |
H10 |
120.8 |
240.0 |
N2 |
C1 |
C9 |
H11 |
239.2 |
120.1 |
C3 |
C9 |
C1 |
N1 |
239.6 |
240.1 |
C1 |
C9 |
C3 |
H8 |
210.9 |
182.4 |
C1 |
C9 |
C3 |
H9 |
93.7 |
62.2 |
C3 |
C9 |
C1 |
H17 |
121.6 |
120.0 |
C6 |
N1 |
C9 |
C1 |
255.4 |
120.2 |
N1 |
C9 |
C1 |
H17 |
242.0 |
239.9 |
H10 |
C1 |
C9 |
H11 |
118.4 |
240.0 |
C3 |
C9 |
N1 |
C1 |
122.9 |
119.8 |
N1 |
C9 |
C3 |
H8 |
91.9 |
62.5 |
N1 |
C9 |
C3 |
H9 |
334.7 |
302.3 |
C3 |
C9 |
N1 |
H17 |
240.5 |
239.9 |
N1 |
C9 |
C1 |
H10 |
35.6 |
299.1 |
N1 |
C9 |
C1 |
H11 |
277.2 |
59.1 |
C1 |
C9 |
N1 |
H17 |
117.6 |
120.1 |
C2 |
C6 |
N1 |
C9 |
251.3 |
262.5 |
C6 |
N1 |
C9 |
C5 |
180.9 |
180.0 |
C9 |
N1 |
C5 |
O1 |
1.4 |
5.8 |
N3 |
C8 |
C10 |
C11 |
359.9 |
0.2 |
C10 |
C8 |
N3 |
H5 |
180.0 |
179.5 |
N3 |
C8 |
C10 |
H14 |
179.9 |
180.0 |
N3 |
C8 |
C10 |
H5 |
180.0 |
180.5 |
C8 |
C10 |
C11 |
H12 |
180.5 |
180.0 |
N3 |
C6 |
C2 |
CL |
179.0 |
179.7 |
C11 |
C10 |
C8 |
N3 |
359.9 |
0.2 |
C11 |
C10 |
C8 |
H5 |
179.9 |
179.7 |
C8 |
C10 |
C11 |
H14 |
180.0 |
179.7 |
C10 |
C11 |
C2 |
CL |
179.2 |
180.0 |
C3 |
C9 |
N1 |
C6 |
18.3 |
240.0 |
C1 |
C9 |
N1 |
C6 |
255.4 |
120.2 |
C6 |
N1 |
C9 |
H17 |
137.8 |
0.1 |
N1 |
C6 |
C2 |
CL |
2.5 |
0.0 |
C6 |
N1 |
C5 |
O1 |
180.5 |
185.8 |
C2 |
C6 |
N1 |
C5 |
72.2 |
82.6 |
C11 |
C2 |
C6 |
CL |
178.4 |
180.0 |
C3 |
C9 |
N1 |
C5 |
197.3 |
60.0 |
C1 |
C9 |
N1 |
C5 |
74.5 |
300.2 |
C6 |
N1 |
C5 |
C9 |
179.1 |
180.0 |
N1 |
C5 |
C12 |
C17 |
65.7 |
215.3 |
C8 |
C10 |
C11 |
C2 |
0.5 |
0.0 |
C11 |
C2 |
C6 |
N1 |
180.9 |
180.0 |
C6 |
C2 |
C11 |
CL |
181.5 |
180.0 |
CL |
C2 |
C6 |
N1 |
2.5 |
0.0 |
O1 |
C5 |
C12 |
C17 |
245.4 |
35.3 |
C6 |
N1 |
C5 |
C12 |
0.2 |
5.7 |
C5 |
C12 |
C17 |
H20 |
359.0 |
0.1 |
C5 |
C12 |
C13 |
C14 |
180.6 |
180.0 |
C5 |
C12 |
C13 |
H3 |
0.6 |
359.7 |
C17 |
C12 |
C13 |
C14 |
358.6 |
0.0 |
C17 |
C12 |
C13 |
H3 |
178.6 |
179.7 |
C12 |
C17 |
C16 |
H6 |
180.2 |
179.8 |
C12 |
C13 |
C14 |
C15 |
0.5 |
359.7 |
C14 |
C13 |
C12 |
H3 |
180.0 |
180.3 |
C12 |
C13 |
C14 |
H13 |
180.5 |
179.7 |
C15 |
C16 |
C17 |
H6 |
180.0 |
180.5 |
C12 |
C13 |
C14 |
H3 |
180.0 |
179.7 |
C17 |
C16 |
C15 |
H6 |
180.0 |
179.5 |
C13 |
C14 |
C15 |
C16 |
0.8 |
0.6 |
C16 |
C15 |
N4 |
N5 |
308.6 |
324.9 |
C15 |
C14 |
C13 |
H3 |
180.5 |
180.0 |
C13 |
C14 |
C15 |
H13 |
180.0 |
180.0 |
C14 |
C15 |
C16 |
H6 |
178.9 |
179.9 |
C14 |
C15 |
N4 |
N5 |
130.2 |
145.0 |
C13 |
C14 |
C15 |
N4 |
179.1 |
180.5 |
N4 |
C15 |
C16 |
H6 |
0.5 |
0.0 |
C15 |
N4 |
N5 |
N6 |
178.4 |
180.0 |
C15 |
N4 |
C22 |
N7 |
1.4 |
0.4 |
C15 |
N4 |
C22 |
C18 |
181.3 |
180.2 |
N5 |
N4 |
C22 |
N7 |
179.5 |
180.0 |
N5 |
N4 |
C22 |
C18 |
359.4 |
359.8 |
N4 |
N5 |
N6 |
C18 |
0.2 |
359.5 |
C16 |
C15 |
N4 |
C22 |
126.5 |
144.4 |
N7 |
C22 |
N4 |
C18 |
180.1 |
180.2 |
N4 |
C22 |
N7 |
C21 |
179.4 |
180.0 |
N4 |
C22 |
C18 |
N6 |
0.7 |
359.9 |
C22 |
C18 |
N6 |
N5 |
359.4 |
0.4 |
N4 |
C22 |
N7 |
C18 |
179.9 |
179.8 |
N7 |
C22 |
C18 |
N6 |
180.6 |
179.7 |
C22 |
N7 |
C21 |
H21 |
180.7 |
180.0 |
N4 |
C22 |
C18 |
N7 |
180.1 |
180.1 |
N5 |
N6 |
C18 |
C22 |
359.4 |
0.4 |
C18 |
C22 |
N7 |
C21 |
359.5 |
0.2 |
C22 |
C18 |
C19 |
H7 |
179.8 |
180.0 |
N6 |
C18 |
C19 |
H7 |
359.4 |
0.1 |
C21 |
N7 |
C22 |
C18 |
359.5 |
0.2 |
N7 |
C21 |
C20 |
H4 |
179.3 |
180.0 |
C18 |
C19 |
C20 |
H4 |
180.4 |
180.0 |
C19 |
C20 |
C21 |
H4 |
180.0 |
179.7 |
C21 |
C20 |
C19 |
H4 |
180.0 |
180.3 |
C4 |
C7 |
H1 |
H2 |
118.8 |
239.9 |
H1 |
C7 |
C3 |
C9 |
278.1 |
177.6 |
C3 |
C7 |
H1 |
H2 |
241.1 |
120.1 |
H1 |
C7 |
C3 |
H8 |
39.5 |
297.5 |
H1 |
C7 |
C3 |
H9 |
156.7 |
57.6 |
C4 |
C7 |
H2 |
H1 |
241.2 |
120.1 |
H2 |
C7 |
C3 |
C9 |
158.9 |
297.7 |
C3 |
C7 |
H2 |
H1 |
118.9 |
239.9 |
H2 |
C7 |
C3 |
H8 |
280.3 |
57.6 |
H2 |
C7 |
C3 |
H9 |
37.5 |
177.8 |
C12 |
C13 |
H3 |
C14 |
180.0 |
180.3 |
H3 |
C13 |
C14 |
C15 |
180.5 |
180.0 |
H3 |
C13 |
C14 |
H13 |
0.5 |
360.0 |
C10 |
C8 |
H5 |
N3 |
180.0 |
180.5 |
H5 |
C8 |
C10 |
C11 |
179.9 |
179.7 |
H5 |
C8 |
C10 |
H14 |
359.9 |
359.4 |
H6 |
C16 |
C15 |
N4 |
0.5 |
0.0 |
H7 |
C19 |
C20 |
H4 |
0.4 |
359.9 |
C7 |
C3 |
H8 |
C9 |
231.0 |
240.3 |
H8 |
C3 |
C7 |
H1 |
39.5 |
297.5 |
H8 |
C3 |
C7 |
H2 |
280.3 |
57.6 |
C7 |
C3 |
H8 |
H9 |
115.5 |
120.1 |
H8 |
C3 |
C9 |
C1 |
210.9 |
182.4 |
H8 |
C3 |
C9 |
N1 |
91.9 |
62.5 |
C9 |
C3 |
H8 |
H9 |
244.5 |
239.8 |
H8 |
C3 |
C9 |
H17 |
332.2 |
302.4 |
C7 |
C3 |
H9 |
C9 |
129.0 |
119.7 |
H9 |
C3 |
C7 |
H1 |
156.7 |
57.6 |
H9 |
C3 |
C7 |
H2 |
37.5 |
177.8 |
C7 |
C3 |
H9 |
H8 |
244.5 |
239.9 |
H9 |
C3 |
C9 |
C1 |
93.7 |
62.2 |
H9 |
C3 |
C9 |
N1 |
334.7 |
302.3 |
C9 |
C3 |
H9 |
H8 |
115.5 |
120.2 |
H9 |
C3 |
C9 |
H17 |
215.0 |
182.2 |
N2 |
C1 |
H10 |
H11 |
117.6 |
240.0 |
H10 |
C1 |
C9 |
N1 |
35.6 |
299.1 |
C9 |
C1 |
H10 |
H11 |
242.4 |
120.0 |
H10 |
C1 |
C9 |
H17 |
153.6 |
59.2 |
N2 |
C1 |
H11 |
H10 |
242.4 |
120.0 |
H11 |
C1 |
C9 |
N1 |
277.2 |
59.1 |
C9 |
C1 |
H11 |
H10 |
117.6 |
240.1 |
H11 |
C1 |
C9 |
H17 |
35.2 |
179.2 |
H12 |
C11 |
C2 |
CL |
359.2 |
0.0 |
C13 |
C14 |
H13 |
C15 |
180.0 |
180.0 |
H13 |
C14 |
C13 |
H3 |
0.5 |
360.0 |
H14 |
C10 |
C8 |
N3 |
179.9 |
180.0 |
C8 |
C10 |
H14 |
C11 |
180.0 |
180.3 |
H14 |
C10 |
C8 |
H5 |
359.9 |
359.4 |
H14 |
C10 |
C11 |
H12 |
0.5 |
0.3 |
H15 |
C4 |
C7 |
H1 |
184.1 |
300.9 |
H15 |
C4 |
C7 |
H2 |
303.4 |
180.8 |
N2 |
C4 |
H15 |
H16 |
239.5 |
240.1 |
H15 |
C4 |
N2 |
H18 |
66.1 |
65.8 |
H16 |
C4 |
C7 |
H1 |
304.4 |
60.9 |
H16 |
C4 |
C7 |
H2 |
63.7 |
300.8 |
N2 |
C4 |
H16 |
H15 |
120.5 |
119.9 |
H16 |
C4 |
N2 |
H18 |
305.7 |
305.9 |
C3 |
C9 |
H17 |
C1 |
236.0 |
240.2 |
C3 |
C9 |
H17 |
N1 |
119.6 |
120.1 |
H17 |
C9 |
C3 |
H8 |
332.2 |
302.4 |
H17 |
C9 |
C3 |
H9 |
215.0 |
182.2 |
C1 |
C9 |
H17 |
N1 |
243.6 |
239.9 |
H17 |
C9 |
C1 |
H10 |
153.6 |
59.2 |
H17 |
C9 |
C1 |
H11 |
35.2 |
179.2 |
H18 |
N2 |
C4 |
H15 |
66.1 |
65.8 |
H18 |
N2 |
C4 |
H16 |
305.7 |
305.9 |
H18 |
N2 |
C1 |
H10 |
304.1 |
54.2 |
H18 |
N2 |
C1 |
H11 |
62.6 |
294.2 |
H20 |
C17 |
C16 |
H6 |
0.3 |
359.7 |
H21 |
C21 |
C20 |
H4 |
359.4 |
0.0 |