PDB Chemical Component MVA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MVA
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CN |
1.485 |
1.470 |
| N |
CA |
1.464 |
1.468 |
| N |
H |
1.000 |
1.009 |
| CN |
HN1 |
1.100 |
1.090 |
| CN |
HN2 |
1.100 |
1.090 |
| CN |
HN3 |
1.100 |
1.090 |
| CA |
CB |
1.595 |
1.530 |
| CA |
C |
1.541 |
1.507 |
| CA |
HA |
1.100 |
1.091 |
| CB |
CG1 |
1.520 |
1.530 |
| CB |
CG2 |
1.543 |
1.529 |
| CB |
HB |
1.100 |
1.090 |
| CG1 |
HG11 |
1.100 |
1.090 |
| CG1 |
HG12 |
1.100 |
1.089 |
| CG1 |
HG13 |
1.100 |
1.091 |
| CG2 |
HG21 |
1.100 |
1.090 |
| CG2 |
HG22 |
1.100 |
1.090 |
| CG2 |
HG23 |
1.100 |
1.091 |
| C |
O |
1.244 |
1.208 |
| C |
OXT |
|
1.343 |
| OXT |
HXT |
|
0.967 |
Bond Angles for MVA
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CN |
N |
CA |
119.8 |
111.0 |
| CN |
N |
H |
106.1 |
111.0 |
| N |
CN |
HN1 |
109.5 |
109.5 |
| N |
CN |
HN2 |
109.5 |
109.5 |
| N |
CN |
HN3 |
109.4 |
109.4 |
| CA |
N |
H |
106.2 |
111.0 |
| N |
CA |
CB |
111.6 |
109.5 |
| N |
CA |
C |
106.2 |
109.5 |
| N |
CA |
HA |
111.2 |
109.5 |
| HN1 |
CN |
HN2 |
109.4 |
109.5 |
| HN1 |
CN |
HN3 |
109.5 |
109.5 |
| HN2 |
CN |
HN3 |
109.5 |
109.5 |
| CB |
CA |
C |
112.0 |
109.5 |
| CB |
CA |
HA |
105.2 |
109.5 |
| CA |
CB |
CG1 |
111.0 |
109.5 |
| CA |
CB |
CG2 |
111.1 |
109.5 |
| CA |
CB |
HB |
105.6 |
109.5 |
| C |
CA |
HA |
110.7 |
109.5 |
| CA |
C |
O |
119.0 |
120.0 |
| CA |
C |
OXT |
|
120.0 |
| CG1 |
CB |
CG2 |
103.5 |
109.5 |
| CG1 |
CB |
HB |
113.0 |
109.5 |
| CB |
CG1 |
HG11 |
109.5 |
109.4 |
| CB |
CG1 |
HG12 |
109.5 |
109.5 |
| CB |
CG1 |
HG13 |
109.5 |
109.5 |
| CG2 |
CB |
HB |
112.9 |
109.5 |
| CB |
CG2 |
HG21 |
109.5 |
109.5 |
| CB |
CG2 |
HG22 |
109.5 |
109.5 |
| CB |
CG2 |
HG23 |
109.5 |
109.5 |
| HG11 |
CG1 |
HG12 |
109.5 |
109.5 |
| HG11 |
CG1 |
HG13 |
109.4 |
109.5 |
| HG12 |
CG1 |
HG13 |
109.5 |
109.5 |
| HG21 |
CG2 |
HG22 |
109.5 |
109.4 |
| HG21 |
CG2 |
HG23 |
109.5 |
109.5 |
| HG22 |
CG2 |
HG23 |
109.5 |
109.5 |
| O |
C |
OXT |
|
120.0 |
| C |
OXT |
HXT |
|
117.0 |
Torsion Angles for MVA
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
CN |
H |
240.0 |
236.0 |
| CN |
N |
CA |
CB |
304.5 |
154.6 |
| CN |
N |
CA |
C |
66.9 |
274.6 |
| CN |
N |
CA |
HA |
187.3 |
34.6 |
| HN1 |
CN |
N |
HN2 |
240.0 |
240.0 |
| HN1 |
CN |
N |
HN3 |
120.0 |
120.0 |
| HN2 |
CN |
N |
HN3 |
240.0 |
240.0 |
| CN |
N |
CA |
H |
120.0 |
123.9 |
| CA |
N |
CN |
HN1 |
180.0 |
295.5 |
| CA |
N |
CN |
HN2 |
300.0 |
55.5 |
| CA |
N |
CN |
HN3 |
60.0 |
175.5 |
| CB |
CA |
N |
C |
237.6 |
240.0 |
| CB |
CA |
N |
HA |
117.2 |
120.0 |
| N |
CA |
CB |
CG1 |
189.9 |
180.0 |
| N |
CA |
CB |
CG2 |
304.4 |
300.0 |
| N |
CA |
CB |
HB |
67.1 |
60.0 |
| C |
CA |
N |
HA |
239.5 |
240.0 |
| N |
CA |
C |
O |
267.0 |
332.8 |
| N |
CA |
C |
OXT |
|
152.8 |
| CN |
N |
H |
CA |
231.4 |
236.1 |
| H |
N |
CN |
HN1 |
300.0 |
59.5 |
| H |
N |
CN |
HN2 |
60.0 |
179.5 |
| H |
N |
CN |
HN3 |
180.0 |
299.5 |
| H |
N |
CA |
CB |
184.5 |
30.7 |
| H |
N |
CA |
C |
306.9 |
150.7 |
| H |
N |
CA |
HA |
67.3 |
270.7 |
| HN1 |
CN |
N |
CA |
180.0 |
295.5 |
| HN1 |
CN |
N |
H |
300.0 |
59.5 |
| N |
CN |
HN1 |
HN2 |
120.0 |
120.0 |
| N |
CN |
HN1 |
HN3 |
240.0 |
240.0 |
| HN2 |
CN |
HN1 |
HN3 |
120.0 |
120.0 |
| HN2 |
CN |
N |
CA |
300.0 |
55.5 |
| HN2 |
CN |
N |
H |
60.0 |
179.5 |
| N |
CN |
HN2 |
HN1 |
240.0 |
240.0 |
| N |
CN |
HN2 |
HN3 |
120.0 |
120.0 |
| HN1 |
CN |
HN2 |
HN3 |
240.0 |
240.0 |
| HN3 |
CN |
N |
CA |
60.0 |
175.5 |
| HN3 |
CN |
N |
H |
180.0 |
299.5 |
| N |
CN |
HN3 |
HN1 |
120.0 |
120.0 |
| N |
CN |
HN3 |
HN2 |
240.0 |
240.0 |
| HN1 |
CN |
HN3 |
HN2 |
120.0 |
120.1 |
| CB |
CA |
N |
H |
184.5 |
30.7 |
| N |
CA |
CB |
C |
118.9 |
120.0 |
| N |
CA |
CB |
HA |
239.3 |
240.0 |
| C |
CA |
CB |
HA |
120.3 |
120.0 |
| CB |
CA |
C |
O |
29.0 |
92.8 |
| CB |
CA |
C |
OXT |
|
272.8 |
| CG1 |
CB |
CA |
CG2 |
245.4 |
240.0 |
| CG1 |
CB |
CA |
HB |
122.8 |
120.0 |
| CA |
CB |
CG1 |
HG11 |
180.0 |
180.0 |
| CA |
CB |
CG1 |
HG12 |
300.0 |
300.0 |
| CA |
CB |
CG1 |
HG13 |
60.0 |
60.0 |
| CG2 |
CB |
CA |
HB |
237.3 |
240.0 |
| CA |
CB |
CG2 |
HG21 |
180.0 |
60.0 |
| CA |
CB |
CG2 |
HG22 |
300.0 |
180.0 |
| CA |
CB |
CG2 |
HG23 |
60.0 |
300.0 |
| C |
CA |
N |
H |
306.9 |
150.7 |
| N |
CA |
C |
CB |
237.9 |
240.0 |
| N |
CA |
C |
HA |
120.8 |
120.0 |
| CB |
CA |
C |
HA |
242.9 |
240.0 |
| C |
CA |
CB |
CG1 |
70.9 |
60.0 |
| C |
CA |
CB |
CG2 |
185.5 |
180.0 |
| C |
CA |
CB |
HB |
308.2 |
300.0 |
| O |
C |
CA |
OXT |
|
180.0 |
| CA |
C |
OXT |
HXT |
|
180.0 |
| HA |
CA |
N |
H |
67.3 |
270.7 |
| N |
CA |
HA |
CB |
121.0 |
120.0 |
| N |
CA |
HA |
C |
242.2 |
240.0 |
| CB |
CA |
HA |
C |
121.2 |
120.0 |
| HA |
CA |
CB |
CG1 |
310.6 |
300.0 |
| HA |
CA |
CB |
CG2 |
65.2 |
60.0 |
| HA |
CA |
CB |
HB |
187.8 |
180.0 |
| HA |
CA |
C |
O |
146.2 |
212.8 |
| HA |
CA |
C |
OXT |
|
32.8 |
| CG1 |
CB |
CA |
C |
70.9 |
60.0 |
| CG1 |
CB |
CA |
HA |
310.6 |
300.0 |
| CA |
CB |
CG1 |
CG2 |
119.3 |
120.0 |
| CA |
CB |
CG1 |
HB |
241.6 |
240.0 |
| CG2 |
CB |
CG1 |
HB |
122.4 |
120.0 |
| CG1 |
CB |
CG2 |
HG21 |
299.2 |
180.0 |
| CG1 |
CB |
CG2 |
HG22 |
59.2 |
300.0 |
| CG1 |
CB |
CG2 |
HG23 |
179.2 |
60.0 |
| HG11 |
CG1 |
CB |
HG12 |
240.0 |
239.9 |
| HG11 |
CG1 |
CB |
HG13 |
119.9 |
120.0 |
| HG12 |
CG1 |
CB |
HG13 |
240.0 |
240.0 |
| CG2 |
CB |
CA |
C |
185.5 |
180.0 |
| CG2 |
CB |
CA |
HA |
65.2 |
60.0 |
| CA |
CB |
CG2 |
CG1 |
240.8 |
240.0 |
| CA |
CB |
CG2 |
HB |
118.3 |
120.0 |
| CG1 |
CB |
CG2 |
HB |
237.5 |
240.0 |
| CG2 |
CB |
CG1 |
HG11 |
60.7 |
60.0 |
| CG2 |
CB |
CG1 |
HG12 |
180.7 |
180.0 |
| CG2 |
CB |
CG1 |
HG13 |
300.8 |
300.0 |
| HG21 |
CG2 |
CB |
HG22 |
240.0 |
240.0 |
| HG21 |
CG2 |
CB |
HG23 |
120.0 |
120.0 |
| HG22 |
CG2 |
CB |
HG23 |
240.0 |
240.0 |
| HB |
CB |
CA |
C |
308.2 |
300.0 |
| HB |
CB |
CA |
HA |
187.8 |
180.0 |
| CA |
CB |
HB |
CG1 |
121.5 |
120.0 |
| CA |
CB |
HB |
CG2 |
238.5 |
240.0 |
| CG1 |
CB |
HB |
CG2 |
117.0 |
120.0 |
| HB |
CB |
CG1 |
HG11 |
298.3 |
299.9 |
| HB |
CB |
CG1 |
HG12 |
58.4 |
60.0 |
| HB |
CB |
CG1 |
HG13 |
178.4 |
180.0 |
| HB |
CB |
CG2 |
HG21 |
61.7 |
300.0 |
| HB |
CB |
CG2 |
HG22 |
181.7 |
60.0 |
| HB |
CB |
CG2 |
HG23 |
301.6 |
180.0 |
| HG11 |
CG1 |
CB |
CG2 |
60.7 |
60.0 |
| HG11 |
CG1 |
CB |
HB |
298.3 |
299.9 |
| CB |
CG1 |
HG11 |
HG12 |
120.0 |
120.0 |
| CB |
CG1 |
HG11 |
HG13 |
240.0 |
240.1 |
| HG12 |
CG1 |
HG11 |
HG13 |
120.0 |
120.0 |
| HG12 |
CG1 |
CB |
CG2 |
180.7 |
180.0 |
| HG12 |
CG1 |
CB |
HB |
58.4 |
60.0 |
| CB |
CG1 |
HG12 |
HG11 |
240.0 |
240.0 |
| CB |
CG1 |
HG12 |
HG13 |
120.0 |
120.0 |
| HG11 |
CG1 |
HG12 |
HG13 |
240.0 |
240.0 |
| HG13 |
CG1 |
CB |
CG2 |
300.8 |
300.0 |
| HG13 |
CG1 |
CB |
HB |
178.4 |
180.0 |
| CB |
CG1 |
HG13 |
HG11 |
120.0 |
119.9 |
| CB |
CG1 |
HG13 |
HG12 |
240.0 |
240.0 |
| HG11 |
CG1 |
HG13 |
HG12 |
120.0 |
120.1 |
| HG21 |
CG2 |
CB |
HB |
61.7 |
300.0 |
| CB |
CG2 |
HG21 |
HG22 |
120.0 |
120.0 |
| CB |
CG2 |
HG21 |
HG23 |
240.0 |
240.0 |
| HG22 |
CG2 |
HG21 |
HG23 |
120.0 |
119.9 |
| HG22 |
CG2 |
CB |
HB |
181.7 |
60.0 |
| CB |
CG2 |
HG22 |
HG21 |
240.0 |
240.0 |
| CB |
CG2 |
HG22 |
HG23 |
120.0 |
120.0 |
| HG21 |
CG2 |
HG22 |
HG23 |
240.0 |
240.1 |
| HG23 |
CG2 |
CB |
HB |
301.6 |
180.0 |
| CB |
CG2 |
HG23 |
HG21 |
120.0 |
120.0 |
| CB |
CG2 |
HG23 |
HG22 |
240.0 |
240.0 |
| HG21 |
CG2 |
HG23 |
HG22 |
120.0 |
119.9 |
| O |
C |
CA |
HA |
146.2 |
212.8 |
| CA |
C |
O |
OXT |
|
180.0 |
| O |
C |
OXT |
HXT |
|
359.9 |
| OXT |
C |
CA |
HA |
|
32.8 |
| CA |
C |
OXT |
O |
|
180.0 |