PDB Chemical Component MV2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MV2

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C	O	1.432	1.429
C	C9	1.524	1.531
N	C6	1.330	1.348
N	C8	1.455	1.465
C1	C2	1.524	1.530
C1	C3	1.522	1.530
C1	C4	1.522	1.530
C1	C5	1.522	1.529
C2	O2	1.432	1.429
C5	O5	1.431	1.430
C5	C6	1.500	1.507
C6	O6	1.220	1.212
C8	C9	1.524	1.530
C	H	1.100	1.090
C	HA	1.100	1.090
N	HN	1.000	0.971
O	HO	0.950	0.967
C2	H2	1.100	1.090
C2	H2A	1.100	1.090
O2	HO2	0.949	0.967
C3	H3	1.100	1.090
C3	H3A	1.100	1.090
C3	H3B	1.100	1.089
C4	H4	1.099	1.090
C4	H4A	1.100	1.090
C4	H4B	1.100	1.090
C5	H5	1.100	1.090
O5	HO5	0.950	0.967
C8	H8	1.099	1.090
C8	H8A	1.100	1.090
C9	H9	1.100	1.090
C9	H9A	1.100	1.090

Bond Angles for MV2

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O	C	C9	109.5	109.5
O	C	H	109.5	109.5
O	C	HA	109.5	109.5
C	O	HO	109.5	114.0
C	C9	C8	111.0	109.5
C9	C	H	109.5	109.5
C9	C	HA	109.5	109.4
C	C9	H9	109.0	109.5
C	C9	H9A	109.0	109.4
C6	N	C8	127.1	120.0
N	C6	C5	116.5	120.0
N	C6	O6	122.9	120.0
C6	N	HN	116.5	120.0
N	C8	C9	105.0	109.4
C8	N	HN	116.5	120.0
N	C8	H8	111.0	109.5
N	C8	H8A	111.0	109.4
C2	C1	C3	109.0	109.4
C2	C1	C4	109.0	109.5
C2	C1	C5	109.0	109.5
C1	C2	O2	109.5	109.5
C1	C2	H2	109.5	109.5
C1	C2	H2A	109.5	109.5
C3	C1	C4	109.9	109.5
C3	C1	C5	109.9	109.5
C1	C3	H3	109.5	109.5
C1	C3	H3A	109.5	109.4
C1	C3	H3B	109.4	109.5
C4	C1	C5	109.9	109.5
C1	C4	H4	109.5	109.5
C1	C4	H4A	109.5	109.5
C1	C4	H4B	109.4	109.5
C1	C5	O5	109.5	109.5
C1	C5	C6	109.4	109.5
C1	C5	H5	109.5	109.5
O2	C2	H2	109.5	109.5
O2	C2	H2A	109.5	109.4
C2	O2	HO2	109.5	114.0
O5	C5	C6	109.5	109.5
O5	C5	H5	109.5	109.5
C5	O5	HO5	109.5	114.0
C5	C6	O6	120.6	120.0
C6	C5	H5	109.5	109.5
C9	C8	H8	111.0	109.5
C9	C8	H8A	111.0	109.4
C8	C9	H9	109.0	109.5
C8	C9	H9A	109.0	109.5
H	C	HA	109.5	109.4
H2	C2	H2A	109.5	109.5
H3	C3	H3A	109.5	109.5
H3	C3	H3B	109.5	109.5
H3A	C3	H3B	109.5	109.4
H4	C4	H4A	109.5	109.5
H4	C4	H4B	109.5	109.5
H4A	C4	H4B	109.5	109.5
H8	C8	H8A	107.9	109.5
H9	C9	H9A	110.0	109.5

Torsion Angles for MV2

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O	C	C9	C8	152.4	180.0
C9	C	O	H	240.0	240.0
C9	C	O	HA	120.0	120.0
O	C	C9	H9	272.4	300.0
O	C	C9	H9A	32.3	60.0
H	C	O	HA	240.0	240.0
O	C	C9	H	120.0	120.0
O	C	C9	HA	240.0	240.0
C9	C	O	HO	180.0	180.0
N	C8	C9	C	304.2	180.0
C	C9	C8	H8	184.2	60.0
C	C9	C8	H8A	64.2	299.9
C8	C9	C	H9	240.0	240.0
C8	C9	C	H9A	120.0	120.0
H	C	C9	HA	120.0	119.9
H9	C9	C	H9A	240.0	240.0
C6	N	C8	C9	72.9	180.0
C8	N	C6	HN	180.0	179.9
C6	N	C8	H8	192.9	300.0
C6	N	C8	H8A	312.9	60.1
C1	C5	C6	N	163.5	111.0
O5	C5	C6	N	43.6	351.0
C5	C6	N	O6	180.0	180.0
N	C6	C5	H5	283.6	231.1
C	C9	C8	N	304.2	180.0
C8	N	C6	C5	180.0	174.9
C8	N	C6	O6	360.0	354.9
C6	N	C8	HN	180.0	180.1
C9	C8	N	H8	240.0	240.0
C9	C8	N	H8A	120.0	119.9
N	C8	C9	H9	184.2	60.0
N	C8	C9	H9A	64.2	300.0
H8	C8	N	H8A	240.0	239.9
C3	C1	C2	C4	120.0	240.1
C3	C1	C2	C5	240.0	120.0
C2	C1	C3	H3	180.0	64.1
C2	C1	C3	H3A	300.0	184.1
C2	C1	C3	H3B	60.0	304.0
C4	C1	C2	C5	120.0	240.0
C2	C1	C4	H4	180.0	60.0
C2	C1	C4	H4A	300.0	180.0
C2	C1	C4	H4B	60.0	300.1
C2	C1	C5	O5	311.2	306.2
C2	C1	C5	C6	191.2	186.2
C2	C1	C5	H5	71.2	66.2
O2	C2	C1	H2	240.0	240.0
O2	C2	C1	H2A	120.0	120.0
C1	C2	O2	HO2	180.0	180.0
H2	C2	C1	H2A	240.0	240.0
C2	C1	C3	C4	240.6	120.0
C2	C1	C3	C5	119.5	240.0
C3	C1	C2	O2	310.0	300.0
C3	C1	C2	H2	70.1	60.0
C3	C1	C2	H2A	190.1	180.0
C4	C1	C3	C5	238.9	120.0
C3	C1	C4	H4	60.6	180.0
C3	C1	C4	H4A	180.6	300.0
C3	C1	C4	H4B	300.6	60.0
C3	C1	C5	O5	70.7	186.2
C3	C1	C5	C6	310.7	66.3
C3	C1	C5	H5	190.7	306.2
H3	C3	C1	H3A	240.0	240.0
H3	C3	C1	H3B	120.0	120.1
H3A	C3	C1	H3B	240.0	240.1
C2	C1	C4	C3	119.4	240.1
C2	C1	C4	C5	240.5	120.1
C4	C1	C2	O2	190.1	60.0
C4	C1	C2	H2	310.1	180.0
C4	C1	C2	H2A	70.1	300.0
C3	C1	C4	C5	121.1	240.0
C4	C1	C3	H3	299.4	304.1
C4	C1	C3	H3A	59.4	64.1
C4	C1	C3	H3B	179.4	184.1
C4	C1	C5	O5	191.7	66.2
C4	C1	C5	C6	71.8	306.3
C4	C1	C5	H5	311.8	186.2
H4	C4	C1	H4A	240.0	240.0
H4	C4	C1	H4B	120.0	120.0
H4A	C4	C1	H4B	240.0	240.0
N	C6	C5	C1	163.5	111.0
C2	C1	C5	C3	240.5	120.0
C2	C1	C5	C4	119.4	240.0
C5	C1	C2	O2	70.1	180.0
C5	C1	C2	H2	190.1	300.0
C5	C1	C2	H2A	310.1	60.0
C3	C1	C5	C4	238.9	120.0
C5	C1	C3	H3	60.5	184.1
C5	C1	C3	H3A	180.5	304.1
C5	C1	C3	H3B	300.5	64.0
C5	C1	C4	H4	299.5	300.0
C5	C1	C4	H4A	59.5	60.0
C5	C1	C4	H4B	179.5	180.0
O5	C5	C1	C6	120.0	120.0
O5	C5	C1	H5	240.0	240.0
C1	C5	O5	HO5	180.0	300.0
C1	C5	C6	O6	343.6	291.0
C6	C5	C1	H5	120.0	120.0
O2	C2	C1	C3	310.0	300.0
O2	C2	C1	C4	190.1	60.0
O2	C2	C1	C5	70.1	180.0
C1	C2	O2	H2	120.0	120.0
C1	C2	O2	H2A	240.0	240.0
H2	C2	O2	H2A	120.0	120.0
N	C6	C5	O5	43.6	351.0
C1	C5	O5	C6	240.1	240.0
C1	C5	O5	H5	120.0	120.0
O5	C5	C6	O6	223.6	171.1
C6	C5	O5	H5	240.0	240.0
C5	C6	N	C8	180.0	174.9
N	C6	C5	O6	180.0	180.0
C5	C6	N	HN	0.0	354.9
C1	C5	C6	O5	120.0	120.0
C1	C5	C6	H5	240.0	240.0
O5	C5	C6	H5	120.0	120.0
C6	C5	O5	HO5	299.9	60.0
O6	C6	N	C8	360.0	354.9
N	C6	O6	C5	180.0	180.0
O6	C6	N	HN	180.0	174.9
O6	C6	C5	H5	103.6	51.1
C8	C9	C	H	32.4	60.0
C8	C9	C	HA	272.4	300.1
C	C9	C8	H9	120.0	120.0
C	C9	C8	H9A	240.0	240.0
C9	C8	N	HN	252.9	359.9
N	C8	C9	H8	120.0	120.0
N	C8	C9	H8A	240.0	240.1
H8	C8	C9	H8A	120.0	120.1
H9	C9	C8	H9A	120.0	120.0
O	C	H	C9	240.0	240.0
O	C	H	HA	120.0	120.0
H	C	O	HO	300.0	300.0
H	C	C9	C8	32.4	60.0
C9	C	H	HA	240.0	240.1
H	C	C9	H9	152.4	180.0
H	C	C9	H9A	272.3	300.0
O	C	HA	C9	120.0	120.0
O	C	HA	H	240.0	240.0
HA	C	O	HO	60.0	60.0
HA	C	C9	C8	272.4	300.1
C9	C	HA	H	120.0	120.0
HA	C	C9	H9	32.4	60.1
HA	C	C9	H9A	152.3	180.0
C6	N	HN	C8	180.0	179.9
HN	N	C6	C5	0.0	354.9
HN	N	C6	O6	180.0	174.9
HN	N	C8	C9	252.9	359.9
HN	N	C8	H8	12.9	119.9
HN	N	C8	H8A	132.9	240.0
HO	O	C	C9	180.0	180.0
HO	O	C	H	300.0	300.0
HO	O	C	HA	60.0	60.0
H2	C2	C1	C3	70.1	60.0
H2	C2	C1	C4	310.1	180.0
H2	C2	C1	C5	190.1	300.0
C1	C2	H2	O2	240.0	240.0
C1	C2	H2	H2A	120.0	120.0
O2	C2	H2	H2A	240.0	240.0
H2	C2	O2	HO2	60.0	60.0
H2A	C2	C1	C3	190.1	180.0
H2A	C2	C1	C4	70.1	300.0
H2A	C2	C1	C5	310.1	60.0
C1	C2	H2A	O2	120.0	120.0
C1	C2	H2A	H2	240.0	240.0
O2	C2	H2A	H2	120.0	120.0
H2A	C2	O2	HO2	300.0	300.0
HO2	O2	C2	H2	60.0	60.0
HO2	O2	C2	H2A	300.0	300.0
H3	C3	C1	C4	299.4	304.1
H3	C3	C1	C5	60.5	184.1
C1	C3	H3	H3A	120.0	119.9
C1	C3	H3	H3B	240.0	240.0
H3A	C3	H3	H3B	120.0	120.0
H3A	C3	C1	C4	59.4	64.1
H3A	C3	C1	C5	180.5	304.1
C1	C3	H3A	H3	240.0	240.0
C1	C3	H3A	H3B	120.0	119.9
H3	C3	H3A	H3B	240.0	239.9
H3B	C3	C1	C4	179.4	184.1
H3B	C3	C1	C5	300.5	64.0
C1	C3	H3B	H3	120.0	120.0
C1	C3	H3B	H3A	240.0	240.1
H3	C3	H3B	H3A	120.0	120.1
H4	C4	C1	C5	299.5	300.0
C1	C4	H4	H4A	120.0	120.0
C1	C4	H4	H4B	240.0	240.0
H4A	C4	H4	H4B	120.0	120.0
H4A	C4	C1	C5	59.5	60.0
C1	C4	H4A	H4	240.0	240.0
C1	C4	H4A	H4B	120.0	120.0
H4	C4	H4A	H4B	240.0	240.0
H4B	C4	C1	C5	179.5	180.0
C1	C4	H4B	H4	120.0	120.0
C1	C4	H4B	H4A	240.0	240.0
H4	C4	H4B	H4A	120.0	120.0
C1	C5	H5	O5	240.0	240.0
C1	C5	H5	C6	120.0	120.0
O5	C5	H5	C6	240.0	240.0
H5	C5	O5	HO5	60.0	180.0
H5	C5	C6	O6	103.6	51.1
HO5	O5	C5	C6	299.9	60.0
HO5	O5	C5	H5	60.0	180.0
N	C8	H8	C9	243.6	240.0
H8	C8	N	HN	12.9	119.9
N	C8	H8	H8A	121.8	120.0
C9	C8	H8	H8A	238.2	240.0
H8	C8	C9	H9	64.2	300.0
H8	C8	C9	H9A	304.2	180.0
N	C8	H8A	C9	116.4	119.9
H8A	C8	N	HN	132.9	240.0
N	C8	H8A	H8	238.2	240.0
C9	C8	H8A	H8	121.8	120.1
H8A	C8	C9	H9	304.2	179.9
H8A	C8	C9	H9A	184.2	59.9
C	C9	H9	C8	238.7	240.0
H9	C9	C	H	152.4	180.0
H9	C9	C	HA	32.4	60.1
C	C9	H9	H9A	119.4	120.0
H9	C9	C8	H8	64.2	300.0
H9	C9	C8	H8A	304.2	179.9
C8	C9	H9	H9A	240.6	239.9
C	C9	H9A	C8	121.3	120.0
H9A	C9	C	H	272.3	300.0
H9A	C9	C	HA	152.3	180.0
C	C9	H9A	H9	240.6	240.0
H9A	C9	C8	H8	304.2	180.0
H9A	C9	C8	H8A	184.2	59.9
C8	C9	H9A	H9	119.4	120.0