PDB Chemical Component MTX

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MTX

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C2 1.368 1.318
N1 C8A 1.438 1.339
C2 NA2 1.413 1.382
C2 N3 1.367 1.329
NA2 HN21 1.019 0.970
NA2 HN22 1.021 0.970
N3 C4 1.344 1.325
C4 NA4 1.306 1.377
C4 C4A 1.443 1.464
NA4 HN41 1.020 0.970
NA4 HN42 1.020 0.970
C4A N5 1.342 1.328
C4A C8A 1.340 1.418
N5 C6 1.334 1.316
C6 C7 1.284 1.394
C6 C9 1.530 1.507
C7 N8 1.348 1.316
C7 H7 1.103 1.080
N8 C8A 1.405 1.335
C9 N10 1.574 1.464
C9 H91 1.115 1.090
C9 H92 1.115 1.090
N10 CM 1.540 1.465
N10 C14 1.404 1.390
CM HM1 1.115 1.089
CM HM2 1.115 1.090
CM HM3 1.116 1.090
C11 C12 1.409 1.399
C11 C16 1.424 1.397
C11 C 1.462 1.476
C12 C13 1.362 1.375
C12 H12 1.103 1.079
C13 C14 1.412 1.393
C13 H13 1.103 1.080
C14 C15 1.401 1.392
C15 C16 1.339 1.375
C15 H15 1.103 1.079
C16 H16 1.103 1.080
C O 1.223 1.216
C N 1.306 1.347
N CA 1.416 1.465
N HN 1.020 0.969
CA CT 1.413 1.506
CA CB 1.492 1.529
CA HA 1.115 1.091
CT O1 1.355 1.209
CT O2 1.294 1.342
O2 HO2 0.950 0.967
CB CG 1.653 1.529
CB HB1 1.115 1.090
CB HB2 1.116 1.090
CG CD 1.735 1.506
CG HG1 1.115 1.090
CG HG2 1.116 1.090
CD OE1 1.379 1.208
CD OE2 1.344 1.342
OE2 HOE2 0.951 0.967

Bond Angles for MTX

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C8A 113.7 121.1
N1 C2 NA2 118.0 118.2
N1 C2 N3 124.5 123.5
N1 C8A C4A 121.2 118.6
N1 C8A N8 112.6 121.9
NA2 C2 N3 117.5 118.3
C2 NA2 HN21 118.0 120.0
C2 NA2 HN22 109.2 120.0
C2 N3 C4 121.5 121.3
HN21 NA2 HN22 109.1 120.0
N3 C4 NA4 119.5 121.1
N3 C4 C4A 116.1 117.7
NA4 C4 C4A 124.2 121.1
C4 NA4 HN41 119.5 120.0
C4 NA4 HN42 108.6 120.0
C4 C4A N5 114.7 122.2
C4 C4A C8A 121.6 117.8
HN41 NA4 HN42 108.7 120.1
N5 C4A C8A 123.2 120.0
C4A N5 C6 112.2 119.5
C4A C8A N8 125.0 119.4
N5 C6 C7 122.5 120.7
N5 C6 C9 115.0 119.7
C7 C6 C9 122.0 119.7
C6 C7 N8 131.2 120.8
C6 C7 H7 111.4 119.6
C6 C9 N10 113.2 109.5
C6 C9 H91 110.8 109.4
C6 C9 H92 110.8 109.4
N8 C7 H7 117.4 119.6
C7 N8 C8A 104.7 119.5
N10 C9 H91 110.8 109.5
N10 C9 H92 110.8 109.5
C9 N10 CM 101.8 120.0
C9 N10 C14 123.3 120.0
H91 C9 H92 99.6 109.5
CM N10 C14 134.5 120.0
N10 CM HM1 101.8 109.5
N10 CM HM2 115.1 109.5
N10 CM HM3 115.1 109.5
N10 C14 C13 115.1 120.0
N10 C14 C15 123.1 120.0
HM1 CM HM2 115.2 109.5
HM1 CM HM3 115.0 109.5
HM2 CM HM3 95.4 109.4
C12 C11 C16 125.9 119.9
C12 C11 C 113.8 120.0
C11 C12 C13 116.9 119.9
C11 C12 H12 123.1 120.1
C16 C11 C 119.9 120.1
C11 C16 C15 113.9 120.0
C11 C16 H16 125.8 120.0
C11 C O 119.6 120.0
C11 C N 114.7 120.0
C13 C12 H12 120.0 120.0
C12 C13 C14 118.5 120.1
C12 C13 H13 119.0 120.0
C14 C13 H13 122.5 119.9
C13 C14 C15 121.5 120.1
C14 C15 C16 122.6 120.1
C14 C15 H15 121.1 120.0
C16 C15 H15 116.3 120.0
C15 C16 H16 120.3 120.0
O C N 125.3 120.0
C N CA 124.7 120.0
C N HN 113.2 120.0
CA N HN 122.1 120.0
N CA CT 110.5 109.5
N CA CB 110.5 109.5
N CA HA 106.7 109.5
CT CA CB 104.9 109.5
CT CA HA 112.2 109.4
CA CT O1 116.9 120.0
CA CT O2 134.4 120.0
CB CA HA 112.0 109.4
CA CB CG 106.9 109.5
CA CB HB1 113.2 109.4
CA CB HB2 113.2 109.5
O1 CT O2 107.6 120.0
CT O2 HO2 134.4 120.0
CG CB HB1 113.1 109.5
CG CB HB2 113.2 109.5
CB CG CD 129.7 109.5
CB CG HG1 105.2 109.4
CB CG HG2 105.2 109.5
HB1 CB HB2 97.2 109.5
CD CG HG1 105.1 109.5
CD CG HG2 105.1 109.5
CG CD OE1 106.2 120.0
CG CD OE2 105.2 120.1
HG1 CG HG2 104.0 109.4
OE1 CD OE2 133.0 119.9
CD OE2 HOE2 105.2 120.0

Torsion Angles for MTX

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C8A C4A 13.0 0.0
C2 N1 C8A N8 181.4 180.0
NA2 C2 N1 N3 183.3 180.1
N1 C2 NA2 HN21 180.0 179.9
N1 C2 NA2 HN22 54.7 0.0
N1 C2 N3 C4 7.1 0.2
C8A N1 C2 NA2 171.1 180.0
C8A N1 C2 N3 347.8 359.9
C4 C4A C8A N1 351.0 360.0
N5 C4A C8A N1 179.9 179.8
C4A C8A N1 N8 191.6 180.0
C7 N8 C8A N1 180.2 180.0
NA2 C2 N1 C8A 171.1 180.0
N1 C2 NA2 N3 176.9 179.9
NA2 C2 N3 C4 183.8 180.1
HN21 NA2 C2 HN22 125.3 179.9
N3 C2 N1 C8A 347.8 359.9
N1 C2 N3 NA2 183.3 180.1
N3 C2 NA2 HN21 3.1 0.0
N3 C2 NA2 HN22 237.8 180.1
C2 N3 C4 NA4 174.5 180.0
C2 N3 C4 C4A 358.3 359.8
HN21 NA2 C2 N3 3.1 0.0
C2 NA2 HN21 HN22 234.7 180.1
HN22 NA2 C2 N3 237.8 180.1
C2 NA2 HN22 HN21 130.3 179.9
NA4 C4 N3 C4A 176.2 180.2
N3 C4 NA4 HN41 180.0 359.9
N3 C4 NA4 HN42 54.7 179.9
N3 C4 C4A N5 174.8 180.3
N3 C4 C4A C8A 2.9 0.1
N3 C4 NA4 C4A 184.1 179.8
NA4 C4 C4A N5 358.8 0.1
NA4 C4 C4A C8A 186.9 179.9
HN41 NA4 C4 HN42 125.3 179.9
N1 C8A C4A C4 351.0 360.0
N3 C4 C4A NA4 176.0 180.2
C4A C4 NA4 HN41 355.9 180.1
C4A C4 NA4 HN42 230.6 0.1
N5 C4A C4 C8A 171.9 180.2
C4 C4A N5 C6 184.2 180.3
C4 C4A C8A N8 184.1 180.0
HN41 NA4 C4 C4A 355.9 180.1
C4 NA4 HN41 HN42 234.8 180.1
HN42 NA4 C4 C4A 230.6 0.1
C4 NA4 HN42 HN41 131.4 179.9
N1 C8A C4A N5 179.9 179.8
C4 C4A N5 C8A 188.3 179.8
N5 C4A C8A N8 13.0 359.8
C4A N5 C6 C7 356.8 359.5
C4A N5 C6 C9 184.9 179.8
N1 C8A C4A N8 166.9 180.0
C4 C4A C8A N5 171.2 180.2
C8A C4A N5 C6 355.9 0.5
C7 N8 C8A C4A 348.0 360.0
C6 N5 C4A C8A 355.9 0.5
C7 C6 N5 C9 171.9 179.8
N5 C6 C7 N8 2.5 0.2
N5 C6 C7 H7 182.6 180.2
N5 C6 C9 N10 203.2 269.7
N5 C6 C9 H91 328.5 149.7
N5 C6 C9 H92 78.0 29.7
N5 C6 C7 C9 188.6 180.2
C7 C6 C9 N10 31.2 90.0
C7 C6 C9 H91 156.5 330.0
C7 C6 C9 H92 266.0 209.9
N8 C7 C6 H7 180.0 180.0
C6 C7 N8 C8A 4.7 0.0
N5 C6 C9 C7 172.0 179.8
C9 C6 C7 N8 173.9 180.0
C9 C6 C7 H7 353.9 360.0
N10 C9 C6 H91 234.8 120.0
N10 C9 C6 H92 125.2 240.0
C6 C9 N10 CM 236.9 90.0
C6 C9 N10 C14 51.5 270.0
H91 C9 C6 H92 250.4 120.0
N1 C8A N8 C7 180.2 180.0
C4A C8A N8 C7 348.0 360.0
N8 C7 C6 C9 173.9 180.0
C6 C7 N8 H7 180.0 180.0
H7 C7 C6 C9 353.9 360.0
C6 C7 H7 N8 180.0 180.0
H7 C7 N8 C8A 184.7 180.0
N1 C8A N8 C4A 192.1 180.0
C8A N8 C7 H7 184.7 180.0
C6 C9 N10 H91 125.2 240.0
C6 C9 N10 H92 234.8 120.0
H91 C9 N10 H92 109.6 239.9
CM N10 C9 C14 185.3 180.0
C9 N10 CM HM1 180.0 0.0
C9 N10 CM HM2 305.3 120.0
C9 N10 CM HM3 54.8 240.0
C9 N10 C14 C13 189.0 180.0
C9 N10 C14 C15 15.5 359.8
C6 C9 H91 N10 233.4 120.0
C6 C9 H91 H92 116.7 240.0
N10 C9 H91 H92 243.3 120.0
H91 C9 N10 CM 111.6 209.9
H91 C9 N10 C14 286.3 30.0
C6 C9 H92 N10 126.6 240.0
C6 C9 H92 H91 243.3 120.0
N10 C9 H92 H91 116.7 240.0
H92 C9 N10 CM 2.1 330.0
H92 C9 N10 C14 176.8 150.0
CM N10 C9 H91 111.6 209.9
CM N10 C9 H92 2.1 330.0
C9 N10 CM C14 173.8 180.0
CM N10 C14 C13 1.7 360.0
CM N10 C14 C15 188.2 179.8
HM1 CM N10 HM2 234.7 240.0
HM1 CM N10 HM3 125.2 120.0
HM2 CM N10 HM3 250.5 240.0
C14 N10 C9 H91 286.3 30.0
C14 N10 C9 H92 176.8 150.0
C9 N10 C14 CM 187.3 180.0
C14 N10 CM HM1 6.2 180.0
C14 N10 CM HM2 131.5 300.0
C14 N10 CM HM3 241.0 60.0
C12 C13 C14 N10 178.3 180.0
N10 C14 C13 H13 358.4 360.0
C13 C14 N10 C15 173.5 180.2
N10 C14 C15 C16 176.2 179.7
N10 C14 C15 H15 356.1 0.2
HM1 CM N10 C14 6.2 180.0
N10 CM HM1 HM2 125.3 120.0
N10 CM HM1 HM3 234.8 240.0
HM2 CM HM1 HM3 109.5 120.0
HM2 CM N10 C14 131.5 300.0
N10 CM HM2 HM1 241.9 240.0
N10 CM HM2 HM3 121.0 120.0
HM1 CM HM2 HM3 239.1 240.0
HM3 CM N10 C14 241.0 60.0
N10 CM HM3 HM1 118.0 120.0
N10 CM HM3 HM2 239.0 240.0
HM1 CM HM3 HM2 121.0 120.0
C16 C11 C12 C 186.6 180.1
C12 C11 C16 C15 353.3 359.6
C12 C11 C16 H16 173.3 180.0
C12 C11 C O 341.5 0.0
C12 C11 C N 154.0 180.0
C13 C12 C11 H12 180.0 180.0
C11 C12 C13 C14 5.3 360.0
C11 C12 C13 H13 185.3 180.0
C12 C11 C16 C 173.1 179.9
C16 C11 C12 C13 2.1 0.1
C16 C11 C12 H12 182.0 180.1
C16 C11 C O 155.4 180.0
C16 C11 C N 327.8 359.9
C14 C15 C16 C11 3.9 0.6
C11 C16 C15 H15 184.0 180.1
C15 C16 C11 H16 180.0 179.7
C12 C11 C C16 186.1 180.1
C C11 C12 C13 175.5 180.0
C C11 C12 H12 355.4 360.0
C C11 C16 C15 180.2 179.7
C C11 C16 H16 0.3 0.1
O C C11 N 187.5 180.1
C11 C N CA 173.4 180.0
C11 C N HN 353.4 0.1
N10 C14 C13 C12 178.3 180.0
C13 C12 C11 C16 2.1 0.1
C13 C12 C11 C 175.5 180.0
C11 C12 C13 H12 180.0 180.0
C14 C13 C12 H13 180.0 180.0
C12 C13 C14 C15 352.0 0.2
H12 C12 C11 C16 182.0 180.1
H12 C12 C11 C 355.4 360.0
C11 C12 H12 C13 180.0 180.0
H12 C12 C13 C14 185.3 180.0
H12 C12 C13 H13 5.3 0.0
N10 C14 C13 C15 186.4 179.8
C14 C13 C12 H12 185.3 180.0
C12 C13 C14 H13 180.0 180.0
C13 C14 C15 C16 3.1 359.5
C13 C14 C15 H15 183.0 180.0
H13 C13 C12 H12 5.3 0.0
C12 C13 H13 C14 180.0 180.0
H13 C13 C14 C15 172.0 180.2
N10 C14 C15 C13 173.1 180.2
C11 C16 C15 C14 3.9 0.6
C15 C14 C13 H13 172.0 180.2
C16 C15 C14 H15 180.0 179.5
C14 C15 C16 H16 183.9 180.2
C15 C16 C11 C 180.2 179.7
C11 C16 C15 H16 180.0 180.3
C14 C15 C16 H15 180.0 180.5
C14 C15 H15 C16 180.0 179.5
H15 C15 C16 H16 3.9 359.7
H16 C16 C11 C 0.3 0.1
C11 C16 H16 C15 180.0 179.7
H16 C16 C15 H15 3.9 359.7
C11 C O N 171.6 179.9
O C N CA 345.4 359.9
O C N HN 165.4 180.0
C11 C N O 188.0 180.1
CA N C HN 180.1 179.9
C N CA CT 236.2 270.1
C N CA CB 120.5 150.0
C N CA HA 358.4 30.1
C N CA HN 179.9 180.1
CT CA N CB 115.7 120.0
CT CA N HA 237.8 240.0
N CA CT O1 327.1 150.0
N CA CT O2 161.4 330.0
CB CA N HA 122.1 120.0
N CA CB CG 280.3 300.1
N CA CB HB1 45.5 60.0
N CA CB HB2 155.0 180.0
C N HN CA 180.1 179.9
HN N CA CT 56.3 90.0
HN N CA CB 300.6 329.9
HN N CA HA 178.5 210.0
CT CA N HN 56.3 90.0
N CA CT CB 240.9 240.0
N CA CT HA 119.0 120.0
CB CA CT HA 238.1 240.0
CT CA CB CG 161.1 180.0
CT CA CB HB1 286.4 300.0
CT CA CB HB2 35.9 60.0
O1 CT CA O2 165.8 180.0
CA CT O2 HO2 180.0 180.1
CB CA N HN 300.6 329.9
N CA CB CT 119.2 120.0
N CA CB HA 241.1 240.0
CT CA CB HA 121.9 120.0
CB CA CT O1 86.3 270.0
CB CA CT O2 280.5 90.0
CG CB CA HB1 234.7 240.0
CG CB CA HB2 125.3 120.1
CA CB CG CD 281.7 180.0
CA CB CG HG1 46.9 300.0
CA CB CG HG2 156.4 59.9
HB1 CB CA HB2 250.5 240.0
HA CA N HN 178.5 210.0
N CA HA CT 238.8 240.0
N CA HA CB 121.1 120.0
CT CA HA CB 242.3 240.0
HA CA CT O1 208.1 30.0
HA CA CT O2 42.4 210.0
HA CA CB CG 39.2 60.1
HA CA CB HB1 164.4 180.0
HA CA CB HB2 273.9 300.0
O1 CT CA CB 86.3 270.0
O1 CT CA HA 208.1 30.0
CA CT O1 O2 190.6 180.0
O1 CT O2 HO2 13.3 0.1
O2 CT CA CB 280.5 90.0
O2 CT CA HA 42.4 210.0
CA CT O2 O1 166.7 180.0
CG CB CA HA 39.2 60.1
CA CB CG HB1 125.3 119.9
CA CB CG HB2 234.7 240.0
HB1 CB CG HB2 109.4 120.0
CD CG CB HG1 234.7 240.0
CD CG CB HG2 125.2 120.0
CB CG CD OE1 130.3 0.0
CB CG CD OE2 345.6 180.0
HG1 CG CB HG2 250.5 240.1
HB1 CB CA HA 164.4 180.0
CA CB HB1 CG 238.2 240.0
CA CB HB1 HB2 119.1 120.0
CG CB HB1 HB2 240.9 240.0
HB1 CB CG CD 156.4 60.0
HB1 CB CG HG1 281.6 180.1
HB1 CB CG HG2 31.1 300.0
HB2 CB CA HA 273.9 300.0
CA CB HB2 CG 121.8 120.1
CA CB HB2 HB1 240.8 240.1
CG CB HB2 HB1 119.0 120.0
HB2 CB CG CD 47.0 300.0
HB2 CB CG HG1 172.2 60.0
HB2 CB CG HG2 281.7 179.9
CD CG CB HB1 156.4 60.0
CD CG CB HB2 47.0 300.0
CB CG CD HG1 125.3 120.0
CB CG CD HG2 234.7 240.0
HG1 CG CD HG2 109.4 120.0
OE1 CD CG OE2 144.7 180.0
CG CD OE2 HOE2 180.1 180.0
HG1 CG CB HB1 281.6 180.1
HG1 CG CB HB2 172.2 60.0
CB CG HG1 CD 220.6 240.0
CB CG HG1 HG2 110.3 119.9
CD CG HG1 HG2 249.7 240.0
HG1 CG CD OE1 5.0 240.0
HG1 CG CD OE2 220.3 60.0
HG2 CG CB HB1 31.1 300.0
HG2 CG CB HB2 281.7 179.9
CB CG HG2 CD 139.4 120.1
CB CG HG2 HG1 249.6 240.1
CD CG HG2 HG1 110.2 120.0
HG2 CG CD OE1 255.6 120.1
HG2 CG CD OE2 110.9 300.0
OE1 CD CG HG1 5.0 240.0
OE1 CD CG HG2 255.6 120.1
CG CD OE1 OE2 229.7 180.0
OE1 CD OE2 HOE2 49.5 360.0
OE2 CD CG HG1 220.3 60.0
OE2 CD CG HG2 110.9 300.0
CG CD OE2 OE1 130.6 180.0