PDB Chemical Component MTE

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MTE

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C2 1.386 1.315
N1 C10 1.352 1.338
C2 N2 1.359 1.372
C2 N3 1.329 1.360
N2 HN21 1.019 0.970
N2 HN22 1.021 0.970
N3 C4 1.365 1.351
N3 HN3 1.020 0.970
C4 O4 1.323 1.221
C4 C9 1.475 1.398
N5 C6 1.578 1.471
N5 C9 1.502 1.410
N5 HN5 1.019 0.971
C6 C7 1.651 1.533
C6 C1' 1.399 1.509
C6 H6 1.115 1.090
C7 N8 1.427 1.465
C7 O3' 1.419 1.427
C7 H7 1.115 1.090
N8 C10 1.369 1.385
N8 HN8 1.021 0.970
C9 C10 1.611 1.387
C1' S1' 1.647 1.762
C1' C2' 1.458 1.338
S1' H1S 0.950 1.345
C2' S2' 1.756 1.761
C2' C3' 1.589 1.503
S2' H2S 0.951 1.344
C3' O3' 1.466 1.426
C3' C4' 1.413 1.530
C3' H3' 1.115 1.090
C4' O4' 1.452 1.429
C4' H4'1 1.115 1.090
C4' H4'2 1.114 1.089
O4' P 1.395 1.610
P O1P 1.516 1.480
P O2P 1.483 1.609
P O3P 1.361 1.610
O2P HOP2 0.951 0.966
O3P HOP3 0.951 0.966

Bond Angles for MTE

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C10 126.9 121.0
N1 C2 N2 119.5 119.2
N1 C2 N3 118.4 121.6
N1 C10 N8 126.7 120.8
N1 C10 C9 114.6 119.6
N2 C2 N3 122.1 119.2
C2 N2 HN21 119.5 120.0
C2 N2 HN22 108.6 120.1
C2 N3 C4 126.0 120.2
C2 N3 HN3 115.4 119.9
HN21 N2 HN22 108.5 120.0
C4 N3 HN3 118.5 119.9
N3 C4 O4 125.6 120.7
N3 C4 C9 119.4 118.5
O4 C4 C9 115.0 120.8
C4 C9 N5 127.4 121.0
C4 C9 C10 114.7 119.1
C6 N5 C9 113.2 119.1
C6 N5 HN5 110.8 120.5
N5 C6 C7 109.0 107.9
N5 C6 C1' 114.9 109.0
N5 C6 H6 106.9 110.3
C9 N5 HN5 110.9 120.5
N5 C9 C10 117.8 119.9
C7 C6 C1' 111.8 108.9
C7 C6 H6 110.3 110.3
C6 C7 N8 114.7 108.6
C6 C7 O3' 105.8 107.8
C6 C7 H7 106.6 110.4
C1' C6 H6 103.7 110.4
C6 C1' S1' 115.0 120.9
C6 C1' C2' 117.5 119.4
N8 C7 O3' 102.8 109.2
N8 C7 H7 109.4 110.3
C7 N8 C10 125.7 119.5
C7 N8 HN8 106.5 120.2
O3' C7 H7 117.8 110.4
C7 O3' C3' 113.3 106.8
C10 N8 HN8 106.5 120.2
N8 C10 C9 118.7 119.6
S1' C1' C2' 127.6 119.7
C1' S1' H1S 114.9 100.1
C1' C2' S2' 113.9 118.6
C1' C2' C3' 123.1 122.2
S2' C2' C3' 123.0 119.1
C2' S2' H2S 113.9 100.0
C2' C3' O3' 110.3 111.8
C2' C3' C4' 108.9 108.8
C2' C3' H3' 109.9 109.0
O3' C3' C4' 111.1 109.1
O3' C3' H3' 107.6 109.0
C4' C3' H3' 109.0 109.0
C3' C4' O4' 111.0 109.4
C3' C4' H4'1 111.7 109.5
C3' C4' H4'2 111.6 109.4
O4' C4' H4'1 111.6 109.4
O4' C4' H4'2 111.6 109.5
C4' O4' P 120.9 106.8
H4'1 C4' H4'2 98.8 109.5
O4' P O1P 110.9 109.5
O4' P O2P 109.5 109.5
O4' P O3P 112.7 109.5
O1P P O2P 113.0 109.5
O1P P O3P 103.7 109.4
O2P P O3P 106.9 109.5
P O2P HOP2 109.5 106.9
P O3P HOP3 112.7 106.8

Torsion Angles for MTE

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C10 N8 180.3 180.3
C2 N1 C10 C9 358.9 0.2
N2 C2 N1 N3 178.2 179.7
N1 C2 N2 HN21 180.0 0.0
N1 C2 N2 HN22 54.8 179.8
N1 C2 N3 C4 0.1 359.3
N1 C2 N3 HN3 180.2 179.8
C10 N1 C2 N2 179.1 180.0
C10 N1 C2 N3 0.8 0.3
C4 C9 C10 N1 0.6 359.7
N5 C9 C10 N1 179.6 179.6
C7 N8 C10 N1 174.8 197.3
N1 C10 N8 HN8 300.1 17.2
N8 C10 N1 C9 181.5 180.1
N2 C2 N1 C10 179.1 180.0
N1 C2 N2 N3 181.8 180.3
N2 C2 N3 C4 181.9 179.6
N2 C2 N3 HN3 2.0 0.2
HN21 N2 C2 HN22 125.2 180.2
N3 C2 N1 C10 0.8 0.3
N1 C2 N3 N2 178.2 179.7
N3 C2 N2 HN21 358.1 179.7
N3 C2 N2 HN22 232.9 359.4
C4 N3 C2 HN3 180.0 179.4
C2 N3 C4 O4 181.1 180.4
C2 N3 C4 C9 359.5 0.6
HN21 N2 C2 N3 358.1 179.7
C2 N2 HN21 HN22 234.8 179.8
HN22 N2 C2 N3 232.9 359.4
C2 N2 HN22 HN21 131.4 180.2
C2 N3 C4 HN3 180.0 180.6
O4 C4 N3 C9 181.6 179.8
N3 C4 C9 N5 181.2 180.0
N3 C4 C9 C10 0.1 359.9
C2 N3 HN3 C4 180.0 179.4
HN3 N3 C4 O4 1.1 359.9
HN3 N3 C4 C9 179.4 180.0
O4 C4 N3 HN3 1.1 359.9
N3 C4 O4 C9 178.5 180.2
O4 C4 C9 N5 359.8 0.2
O4 C4 C9 C10 178.7 180.1
N1 C10 C9 C4 0.6 359.7
C9 C4 N3 HN3 179.4 180.0
N3 C4 C9 O4 181.4 179.8
C6 N5 C9 C4 209.4 195.7
C4 C9 N5 HN5 334.6 15.7
N5 C9 C4 C10 181.1 180.1
N8 C10 C9 C4 179.3 179.6
C4 C9 N5 C6 209.4 195.7
C9 N5 C6 HN5 125.3 179.9
C6 N5 C9 C10 30.6 15.8
C7 C6 N5 C1' 126.3 118.1
C7 C6 N5 H6 240.8 239.4
N5 C6 C7 N8 46.0 55.5
N5 C6 C7 O3' 293.4 297.2
N5 C6 C7 H7 167.2 176.6
C1' C6 N5 H6 114.5 121.3
N5 C6 C1' S1' 277.5 279.3
N5 C6 C1' C2' 98.7 99.0
N1 C10 C9 N5 179.6 179.6
C4 C9 N5 C10 178.8 179.9
C6 N5 C9 HN5 234.7 180.1
C9 N5 C6 C7 309.5 316.6
C9 N5 C6 C1' 183.1 198.4
C9 N5 C6 H6 68.7 77.1
N8 C10 C9 N5 358.3 359.5
C6 N5 HN5 C9 126.6 179.9
HN5 N5 C6 C7 184.2 136.6
HN5 N5 C6 C1' 57.9 18.5
HN5 N5 C6 H6 303.4 257.2
HN5 N5 C9 C10 155.8 195.8
C7 C6 N5 C9 309.5 316.6
C7 C6 N5 HN5 184.2 136.6
N5 C6 C7 C1' 231.9 241.9
N5 C6 C7 H6 117.1 120.6
C1' C6 C7 H6 245.1 238.7
C7 C6 C1' S1' 152.7 161.8
C7 C6 C1' C2' 333.9 341.6
N8 C7 C6 O3' 112.6 118.2
N8 C7 C6 H7 238.7 238.9
C6 C7 N8 C10 340.5 314.5
C6 C7 N8 HN8 215.2 134.5
O3' C7 C6 H7 126.2 120.7
C6 C7 O3' C3' 290.6 284.8
C1' C6 N5 C9 183.1 198.4
C1' C6 N5 HN5 57.9 18.5
N5 C6 C1' C7 124.8 117.5
N5 C6 C1' H6 243.7 238.8
C7 C6 C1' H6 118.8 121.3
C1' C6 C7 N8 174.0 173.6
C1' C6 C7 O3' 61.5 55.4
C1' C6 C7 H7 295.3 294.7
S1' C1' C6 C2' 178.8 180.3
C6 C1' S1' H1S 180.0 304.7
C6 C1' C2' S2' 177.2 180.2
C6 C1' C2' C3' 358.9 0.4
H6 C6 N5 C9 68.7 77.1
H6 C6 N5 HN5 303.4 257.2
N5 C6 H6 C7 241.7 240.9
N5 C6 H6 C1' 121.8 120.4
C7 C6 H6 C1' 240.1 239.6
H6 C6 C7 N8 288.9 294.9
H6 C6 C7 O3' 176.3 176.7
H6 C6 C7 H7 50.2 56.0
H6 C6 C1' S1' 33.9 40.6
H6 C6 C1' C2' 215.0 220.3
N1 C10 N8 C7 174.8 197.3
N8 C7 C6 C1' 174.0 173.6
N8 C7 C6 H6 288.9 294.9
C6 C7 N8 O3' 245.7 242.6
C6 C7 N8 H7 119.7 121.1
O3' C7 N8 H7 234.0 238.5
N8 C7 O3' C3' 169.9 167.0
C10 N8 C7 HN8 125.3 179.9
C7 N8 C10 C9 356.3 17.4
O3' C7 C6 C1' 61.5 55.4
O3' C7 C6 H6 176.3 176.7
C6 C7 O3' N8 120.7 117.8
C6 C7 O3' H7 241.0 239.3
N8 C7 O3' H7 120.3 121.5
O3' C7 N8 C10 94.8 71.8
O3' C7 N8 HN8 329.5 251.9
C2' C3' O3' C7 41.8 54.6
C7 O3' C3' C4' 162.7 175.0
C7 O3' C3' H3' 282.0 294.0
H7 C7 C6 C1' 295.3 294.7
H7 C7 C6 H6 50.2 56.0
C6 C7 H7 N8 235.4 240.0
C6 C7 H7 O3' 118.6 119.2
N8 C7 H7 O3' 243.2 239.2
H7 C7 N8 C10 220.8 193.3
H7 C7 N8 HN8 95.5 13.4
H7 C7 O3' C3' 49.6 45.5
N1 C10 N8 C9 178.5 179.9
C4 C9 C10 N8 179.3 179.6
N5 C9 C10 N8 358.3 359.5
C10 N8 C7 O3' 94.8 71.8
C10 N8 C7 H7 220.8 193.3
C7 N8 C10 HN8 234.7 180.1
HN8 N8 C7 O3' 329.5 251.9
HN8 N8 C7 H7 95.5 13.4
C7 N8 HN8 C10 136.3 179.9
HN8 N8 C10 C9 121.6 197.4
N1 C10 C9 N8 181.4 180.1
C4 C9 C10 N5 181.0 180.1
C10 C9 N5 HN5 155.8 195.8
C9 C10 N8 HN8 121.6 197.4
S1' C1' C6 H6 33.9 40.6
C6 C1' S1' C2' 181.3 179.7
S1' C1' C2' S2' 358.6 359.9
S1' C1' C2' C3' 180.3 180.1
C2' C1' C6 H6 215.0 220.3
C6 C1' C2' S1' 178.6 180.3
C2' C1' S1' H1S 358.7 125.0
S2' C2' C1' C3' 178.3 179.8
C1' C2' S2' H2S 180.0 354.9
C1' C2' C3' O3' 356.2 342.0
C1' C2' C3' C4' 234.0 221.5
C1' C2' C3' H3' 114.7 102.6
H1S S1' C1' C2' 358.7 125.0
C1' C2' S2' C3' 181.7 180.2
S2' C2' C3' O3' 178.1 162.3
S2' C2' C3' C4' 55.9 41.7
S2' C2' C3' H3' 296.6 282.9
C7 O3' C3' C2' 41.8 54.6
C1' C2' C3' S2' 178.1 179.8
C3' C2' S2' H2S 358.3 174.7
O3' C3' C2' C4' 122.2 120.6
O3' C3' C2' H3' 241.5 239.4
C4' C3' C2' H3' 119.4 118.8
C2' C3' C4' O4' 180.1 182.3
C2' C3' C4' H4'1 305.4 302.2
C2' C3' C4' H4'2 54.9 62.2
H2S S2' C2' C3' 358.3 174.7
C3' O3' C7 H7 49.6 45.5
C2' C3' O3' C4' 239.2 239.6
C2' C3' O3' H3' 119.9 120.6
C4' C3' O3' H3' 240.7 241.0
O3' C3' C4' O4' 58.5 60.0
O3' C3' C4' H4'1 183.7 180.0
O3' C3' C4' H4'2 293.2 300.0
C2' C3' C4' O3' 121.7 122.2
C2' C3' C4' H3' 240.1 241.2
O3' C3' C4' H3' 118.4 118.9
O4' C4' C3' H4'1 234.8 240.1
O4' C4' C3' H4'2 125.2 120.0
C3' C4' O4' P 186.9 180.0
H4'1 C4' C3' H4'2 250.5 240.0
C2' C3' H3' O3' 239.9 237.7
C2' C3' H3' C4' 119.2 118.7
O3' C3' H3' C4' 239.4 241.0
H3' C3' C4' O4' 300.0 301.1
H3' C3' C4' H4'1 65.3 61.0
H3' C3' C4' H4'2 174.8 181.1
O4' C4' C3' H3' 300.0 301.1
C3' C4' O4' H4'1 125.3 120.0
C3' C4' O4' H4'2 234.7 240.0
H4'1 C4' O4' H4'2 109.5 120.0
C4' O4' P O1P 298.2 59.9
C4' O4' P O2P 172.9 179.9
C4' O4' P O3P 54.0 300.0
H4'1 C4' C3' H3' 65.3 61.0
C3' C4' H4'1 O4' 235.1 240.0
C3' C4' H4'1 H4'2 117.6 120.0
O4' C4' H4'1 H4'2 242.5 240.0
H4'1 C4' O4' P 61.7 60.0
H4'2 C4' C3' H3' 174.8 181.1
C3' C4' H4'2 O4' 124.9 120.0
C3' C4' H4'2 H4'1 242.4 239.9
O4' C4' H4'2 H4'1 117.5 120.0
H4'2 C4' O4' P 312.2 300.0
P O4' C4' H4'1 61.7 60.0
P O4' C4' H4'2 312.2 300.0
O1P P O4' O2P 125.4 240.0
O1P P O4' O3P 244.2 119.9
O2P P O4' O3P 118.8 239.9
O4' P O2P HOP2 180.0 179.9
O4' P O3P HOP3 180.0 300.0
O4' P O1P O2P 236.6 120.1
O4' P O1P O3P 121.3 240.1
O2P P O1P O3P 244.6 120.0
O1P P O2P HOP2 55.9 300.0
O1P P O3P HOP3 300.0 180.1
O4' P O2P O1P 124.1 240.0
O4' P O2P O3P 237.6 120.0
O1P P O2P O3P 113.5 240.1
O2P P O3P HOP3 59.6 60.1
O4' P O3P O1P 240.0 119.9
O4' P O3P O2P 120.3 239.9
O1P P O3P O2P 240.4 120.0
O3P P O2P HOP2 302.4 59.9
HOP2 O2P P O3P 302.4 59.9