PDB Chemical Component MST
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MST
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
C2 |
1.318 |
1.330 |
N1 |
C6 |
1.378 |
1.328 |
C2 |
S7 |
1.781 |
1.762 |
C2 |
N3 |
1.325 |
1.329 |
S7 |
C8 |
1.790 |
1.811 |
C8 |
H83 |
1.115 |
1.089 |
C8 |
H82 |
1.115 |
1.089 |
C8 |
H81 |
1.115 |
1.090 |
N3 |
C4 |
1.377 |
1.329 |
C4 |
N9 |
1.344 |
1.380 |
C4 |
N5 |
1.319 |
1.329 |
N9 |
C10 |
1.452 |
1.465 |
N9 |
H9 |
1.019 |
0.970 |
C10 |
C11 |
1.542 |
1.530 |
C10 |
C12 |
1.540 |
1.529 |
C10 |
C13 |
1.544 |
1.529 |
C11 |
H113 |
1.116 |
1.090 |
C11 |
H112 |
1.114 |
1.090 |
C11 |
H111 |
1.114 |
1.091 |
C12 |
H123 |
1.116 |
1.089 |
C12 |
H122 |
1.115 |
1.090 |
C12 |
H121 |
1.114 |
1.090 |
C13 |
H133 |
1.116 |
1.089 |
C13 |
H132 |
1.115 |
1.091 |
C13 |
H131 |
1.114 |
1.090 |
N5 |
C6 |
1.323 |
1.330 |
C6 |
N14 |
1.356 |
1.380 |
N14 |
C15 |
1.462 |
1.465 |
N14 |
H14 |
1.020 |
0.970 |
C15 |
C16 |
1.474 |
1.529 |
C15 |
H152 |
1.116 |
1.089 |
C15 |
H151 |
1.115 |
1.090 |
C16 |
H163 |
1.114 |
1.090 |
C16 |
H162 |
1.115 |
1.090 |
C16 |
H161 |
1.115 |
1.089 |
Bond Angles for MST
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
N1 |
C6 |
111.6 |
120.0 |
N1 |
C2 |
S7 |
114.1 |
120.0 |
N1 |
C2 |
N3 |
129.9 |
120.0 |
N1 |
C6 |
N5 |
125.8 |
120.0 |
N1 |
C6 |
N14 |
116.0 |
120.0 |
S7 |
C2 |
N3 |
116.1 |
120.0 |
C2 |
S7 |
C8 |
103.4 |
100.0 |
C2 |
N3 |
C4 |
111.6 |
120.0 |
S7 |
C8 |
H83 |
103.4 |
109.4 |
S7 |
C8 |
H82 |
114.5 |
109.5 |
S7 |
C8 |
H81 |
114.5 |
109.4 |
H83 |
C8 |
H82 |
114.5 |
109.5 |
H83 |
C8 |
H81 |
114.5 |
109.5 |
H82 |
C8 |
H81 |
96.0 |
109.5 |
N3 |
C4 |
N9 |
117.1 |
120.0 |
N3 |
C4 |
N5 |
125.7 |
120.0 |
N9 |
C4 |
N5 |
116.9 |
120.0 |
C4 |
N9 |
C10 |
127.8 |
120.0 |
C4 |
N9 |
H9 |
105.8 |
120.0 |
C4 |
N5 |
C6 |
115.1 |
120.0 |
C10 |
N9 |
H9 |
105.7 |
120.0 |
N9 |
C10 |
C11 |
108.7 |
109.5 |
N9 |
C10 |
C12 |
110.2 |
109.5 |
N9 |
C10 |
C13 |
109.0 |
109.5 |
C11 |
C10 |
C12 |
108.6 |
109.5 |
C11 |
C10 |
C13 |
109.4 |
109.4 |
C10 |
C11 |
H113 |
108.7 |
109.5 |
C10 |
C11 |
H112 |
112.5 |
109.5 |
C10 |
C11 |
H111 |
112.5 |
109.4 |
C12 |
C10 |
C13 |
110.9 |
109.6 |
C10 |
C12 |
H123 |
110.2 |
109.6 |
C10 |
C12 |
H122 |
112.0 |
109.4 |
C10 |
C12 |
H121 |
112.0 |
109.5 |
C10 |
C13 |
H133 |
109.0 |
109.6 |
C10 |
C13 |
H132 |
112.4 |
109.5 |
C10 |
C13 |
H131 |
112.4 |
109.4 |
H113 |
C11 |
H112 |
112.5 |
109.5 |
H113 |
C11 |
H111 |
112.5 |
109.4 |
H112 |
C11 |
H111 |
98.0 |
109.5 |
H123 |
C12 |
H122 |
111.9 |
109.5 |
H123 |
C12 |
H121 |
112.0 |
109.4 |
H122 |
C12 |
H121 |
98.5 |
109.5 |
H133 |
C13 |
H132 |
112.3 |
109.5 |
H133 |
C13 |
H131 |
112.3 |
109.5 |
H132 |
C13 |
H131 |
98.1 |
109.4 |
N5 |
C6 |
N14 |
118.1 |
120.0 |
C6 |
N14 |
C15 |
125.8 |
120.0 |
C6 |
N14 |
H14 |
106.4 |
120.0 |
C15 |
N14 |
H14 |
106.5 |
120.0 |
N14 |
C15 |
C16 |
109.5 |
109.5 |
N14 |
C15 |
H152 |
112.1 |
109.5 |
N14 |
C15 |
H151 |
112.2 |
109.4 |
C16 |
C15 |
H152 |
112.3 |
109.5 |
C16 |
C15 |
H151 |
112.2 |
109.5 |
C15 |
C16 |
H163 |
109.5 |
109.4 |
C15 |
C16 |
H162 |
112.2 |
109.5 |
C15 |
C16 |
H161 |
112.2 |
109.5 |
H152 |
C15 |
H151 |
98.2 |
109.4 |
H163 |
C16 |
H162 |
112.2 |
109.5 |
H163 |
C16 |
H161 |
112.2 |
109.5 |
H162 |
C16 |
H161 |
98.3 |
109.4 |
Torsion Angles for MST
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
N1 |
C6 |
N5 |
5.1 |
359.6 |
C2 |
N1 |
C6 |
N14 |
181.8 |
179.8 |
S7 |
C2 |
N1 |
N3 |
179.5 |
179.8 |
N1 |
C2 |
S7 |
C8 |
173.9 |
0.2 |
N1 |
C2 |
N3 |
C4 |
357.4 |
359.8 |
C6 |
N1 |
C2 |
S7 |
177.0 |
180.2 |
C6 |
N1 |
C2 |
N3 |
357.5 |
0.4 |
C4 |
N5 |
C6 |
N1 |
357.8 |
0.2 |
N5 |
C6 |
N1 |
N14 |
183.3 |
179.8 |
N1 |
C6 |
N14 |
C15 |
2.1 |
359.8 |
N1 |
C6 |
N14 |
H14 |
236.8 |
179.8 |
S7 |
C2 |
N1 |
C6 |
177.0 |
180.2 |
N1 |
C2 |
S7 |
N3 |
180.4 |
180.2 |
S7 |
C2 |
N3 |
C4 |
177.9 |
180.0 |
C2 |
S7 |
C8 |
H83 |
180.0 |
180.0 |
C2 |
S7 |
C8 |
H82 |
305.2 |
300.0 |
C2 |
S7 |
C8 |
H81 |
54.7 |
60.0 |
N3 |
C2 |
N1 |
C6 |
357.5 |
0.4 |
N1 |
C2 |
N3 |
S7 |
179.5 |
179.8 |
N3 |
C2 |
S7 |
C8 |
353.5 |
180.0 |
C2 |
N3 |
C4 |
N9 |
180.3 |
180.0 |
C2 |
N3 |
C4 |
N5 |
6.2 |
-0.0 |
C8 |
S7 |
C2 |
N3 |
353.5 |
180.0 |
H83 |
C8 |
S7 |
H82 |
234.8 |
240.0 |
H83 |
C8 |
S7 |
H81 |
125.3 |
120.0 |
H82 |
C8 |
S7 |
H81 |
250.5 |
240.1 |
S7 |
C8 |
H83 |
H82 |
125.3 |
120.0 |
S7 |
C8 |
H83 |
H81 |
234.7 |
240.1 |
H82 |
C8 |
H83 |
H81 |
109.4 |
120.0 |
S7 |
C8 |
H82 |
H83 |
240.8 |
240.0 |
S7 |
C8 |
H82 |
H81 |
120.5 |
119.9 |
H83 |
C8 |
H82 |
H81 |
239.7 |
239.9 |
S7 |
C8 |
H81 |
H83 |
119.2 |
120.0 |
S7 |
C8 |
H81 |
H82 |
239.5 |
240.0 |
H83 |
C8 |
H81 |
H82 |
120.3 |
120.1 |
N9 |
C4 |
N3 |
N5 |
174.1 |
180.0 |
N3 |
C4 |
N9 |
C10 |
16.5 |
-0.0 |
N3 |
C4 |
N9 |
H9 |
251.3 |
180.0 |
N3 |
C4 |
N5 |
C6 |
355.9 |
-0.0 |
N3 |
C4 |
N9 |
N5 |
185.4 |
180.0 |
N9 |
C4 |
N5 |
C6 |
181.8 |
180.0 |
C10 |
N9 |
C4 |
H9 |
125.2 |
180.0 |
C4 |
N9 |
C10 |
C11 |
169.7 |
180.0 |
C4 |
N9 |
C10 |
C12 |
50.8 |
300.0 |
C4 |
N9 |
C10 |
C13 |
288.9 |
60.1 |
N1 |
C6 |
N5 |
C4 |
357.8 |
0.2 |
N3 |
C4 |
N5 |
N9 |
174.1 |
180.0 |
N5 |
C4 |
N9 |
C10 |
191.1 |
180.0 |
N5 |
C4 |
N9 |
H9 |
65.9 |
360.0 |
C4 |
N5 |
C6 |
N14 |
181.2 |
180.0 |
C10 |
N9 |
C4 |
N5 |
191.1 |
180.0 |
C4 |
N9 |
C10 |
H9 |
234.7 |
180.0 |
C11 |
C10 |
N9 |
C12 |
118.9 |
240.0 |
C11 |
C10 |
N9 |
C13 |
240.8 |
119.9 |
N9 |
C10 |
C11 |
H113 |
180.0 |
180.0 |
N9 |
C10 |
C11 |
H112 |
305.2 |
300.0 |
N9 |
C10 |
C11 |
H111 |
54.8 |
60.0 |
C12 |
C10 |
N9 |
C13 |
121.9 |
239.9 |
N9 |
C10 |
C12 |
H123 |
180.0 |
300.0 |
N9 |
C10 |
C12 |
H122 |
305.2 |
60.1 |
N9 |
C10 |
C12 |
H121 |
54.7 |
180.0 |
N9 |
C10 |
C13 |
H133 |
180.0 |
59.9 |
N9 |
C10 |
C13 |
H132 |
305.2 |
180.0 |
N9 |
C10 |
C13 |
H131 |
54.8 |
299.9 |
H9 |
N9 |
C4 |
N5 |
65.9 |
360.0 |
C4 |
N9 |
H9 |
C10 |
137.9 |
180.0 |
H9 |
N9 |
C10 |
C11 |
295.0 |
360.0 |
H9 |
N9 |
C10 |
C12 |
176.1 |
120.0 |
H9 |
N9 |
C10 |
C13 |
54.2 |
240.1 |
C11 |
C10 |
N9 |
H9 |
295.0 |
-0.0 |
N9 |
C10 |
C11 |
C12 |
240.1 |
120.0 |
N9 |
C10 |
C11 |
C13 |
118.9 |
240.0 |
C12 |
C10 |
C11 |
C13 |
238.8 |
120.1 |
C11 |
C10 |
C12 |
H123 |
61.0 |
60.0 |
C11 |
C10 |
C12 |
H122 |
186.2 |
180.0 |
C11 |
C10 |
C12 |
H121 |
295.7 |
300.0 |
C11 |
C10 |
C13 |
H133 |
298.8 |
300.0 |
C11 |
C10 |
C13 |
H132 |
64.0 |
60.1 |
C11 |
C10 |
C13 |
H131 |
173.5 |
180.0 |
H113 |
C11 |
C10 |
H112 |
234.7 |
240.0 |
H113 |
C11 |
C10 |
H111 |
125.2 |
120.0 |
H112 |
C11 |
C10 |
H111 |
250.5 |
240.0 |
C12 |
C10 |
N9 |
H9 |
176.1 |
120.0 |
N9 |
C10 |
C12 |
C11 |
119.0 |
240.0 |
N9 |
C10 |
C12 |
C13 |
239.2 |
120.1 |
C11 |
C10 |
C12 |
C13 |
120.2 |
240.0 |
C12 |
C10 |
C11 |
H113 |
299.9 |
60.0 |
C12 |
C10 |
C11 |
H112 |
65.1 |
180.1 |
C12 |
C10 |
C11 |
H111 |
174.7 |
300.1 |
C12 |
C10 |
C13 |
H133 |
58.5 |
180.0 |
C12 |
C10 |
C13 |
H132 |
183.8 |
300.1 |
C12 |
C10 |
C13 |
H131 |
293.3 |
60.0 |
H123 |
C12 |
C10 |
H122 |
234.8 |
239.9 |
H123 |
C12 |
C10 |
H121 |
125.3 |
120.0 |
H122 |
C12 |
C10 |
H121 |
250.5 |
240.1 |
C13 |
C10 |
N9 |
H9 |
54.2 |
240.1 |
N9 |
C10 |
C13 |
C11 |
241.2 |
119.9 |
N9 |
C10 |
C13 |
C12 |
121.5 |
239.9 |
C11 |
C10 |
C13 |
C12 |
240.2 |
120.0 |
C13 |
C10 |
C11 |
H113 |
61.0 |
300.0 |
C13 |
C10 |
C11 |
H112 |
186.3 |
60.0 |
C13 |
C10 |
C11 |
H111 |
295.8 |
180.0 |
C13 |
C10 |
C12 |
H123 |
300.8 |
180.0 |
C13 |
C10 |
C12 |
H122 |
66.0 |
300.0 |
C13 |
C10 |
C12 |
H121 |
175.5 |
60.0 |
H133 |
C13 |
C10 |
H132 |
234.7 |
239.9 |
H133 |
C13 |
C10 |
H131 |
125.2 |
120.0 |
H132 |
C13 |
C10 |
H131 |
250.5 |
240.1 |
H113 |
C11 |
C10 |
C12 |
299.9 |
60.0 |
H113 |
C11 |
C10 |
C13 |
61.0 |
300.0 |
C10 |
C11 |
H113 |
H112 |
125.3 |
120.1 |
C10 |
C11 |
H113 |
H111 |
234.8 |
240.0 |
H112 |
C11 |
H113 |
H111 |
109.5 |
119.9 |
H112 |
C11 |
C10 |
C12 |
65.1 |
180.1 |
H112 |
C11 |
C10 |
C13 |
186.3 |
60.0 |
C10 |
C11 |
H112 |
H113 |
236.8 |
240.0 |
C10 |
C11 |
H112 |
H111 |
118.4 |
120.0 |
H113 |
C11 |
H112 |
H111 |
241.6 |
240.1 |
H111 |
C11 |
C10 |
C12 |
174.7 |
300.1 |
H111 |
C11 |
C10 |
C13 |
295.8 |
180.0 |
C10 |
C11 |
H111 |
H113 |
123.1 |
120.0 |
C10 |
C11 |
H111 |
H112 |
241.6 |
239.9 |
H113 |
C11 |
H111 |
H112 |
118.4 |
119.9 |
H123 |
C12 |
C10 |
C13 |
300.8 |
180.0 |
C10 |
C12 |
H123 |
H122 |
125.2 |
120.0 |
C10 |
C12 |
H123 |
H121 |
234.7 |
240.0 |
H122 |
C12 |
H123 |
H121 |
109.4 |
120.0 |
H122 |
C12 |
C10 |
C13 |
66.0 |
300.0 |
C10 |
C12 |
H122 |
H123 |
235.7 |
239.9 |
C10 |
C12 |
H122 |
H121 |
117.9 |
119.9 |
H123 |
C12 |
H122 |
H121 |
242.1 |
240.0 |
H121 |
C12 |
C10 |
C13 |
175.5 |
60.0 |
C10 |
C12 |
H121 |
H123 |
124.3 |
120.1 |
C10 |
C12 |
H121 |
H122 |
242.1 |
240.1 |
H123 |
C12 |
H121 |
H122 |
117.8 |
120.0 |
C10 |
C13 |
H133 |
H132 |
125.3 |
120.1 |
C10 |
C13 |
H133 |
H131 |
234.7 |
240.0 |
H132 |
C13 |
H133 |
H131 |
109.4 |
119.9 |
C10 |
C13 |
H132 |
H133 |
236.6 |
239.9 |
C10 |
C13 |
H132 |
H131 |
118.3 |
119.9 |
H133 |
C13 |
H132 |
H131 |
241.8 |
240.1 |
C10 |
C13 |
H131 |
H133 |
123.4 |
120.1 |
C10 |
C13 |
H131 |
H132 |
241.7 |
240.0 |
H133 |
C13 |
H131 |
H132 |
118.3 |
119.9 |
N1 |
C6 |
N5 |
N14 |
176.7 |
180.2 |
N5 |
C6 |
N14 |
C15 |
179.0 |
180.0 |
N5 |
C6 |
N14 |
H14 |
53.8 |
-0.0 |
N1 |
C6 |
N14 |
N5 |
183.0 |
179.8 |
C15 |
N14 |
C6 |
H14 |
125.2 |
180.0 |
C6 |
N14 |
C15 |
C16 |
188.6 |
180.0 |
C6 |
N14 |
C15 |
H152 |
313.9 |
59.9 |
C6 |
N14 |
C15 |
H151 |
63.3 |
300.0 |
C6 |
N14 |
C15 |
H14 |
234.8 |
180.0 |
C16 |
C15 |
N14 |
H152 |
234.7 |
120.1 |
C16 |
C15 |
N14 |
H151 |
125.3 |
240.0 |
N14 |
C15 |
C16 |
H163 |
180.0 |
180.0 |
N14 |
C15 |
C16 |
H162 |
305.3 |
300.0 |
N14 |
C15 |
C16 |
H161 |
54.7 |
60.0 |
H152 |
C15 |
N14 |
H151 |
250.6 |
119.9 |
C6 |
N14 |
H14 |
C15 |
136.3 |
180.0 |
H14 |
N14 |
C15 |
C16 |
313.8 |
360.0 |
H14 |
N14 |
C15 |
H152 |
79.1 |
239.9 |
H14 |
N14 |
C15 |
H151 |
188.5 |
120.0 |
C16 |
C15 |
N14 |
H14 |
313.8 |
-0.0 |
N14 |
C15 |
C16 |
H152 |
125.2 |
240.0 |
N14 |
C15 |
C16 |
H151 |
234.7 |
120.0 |
H152 |
C15 |
C16 |
H151 |
109.5 |
240.0 |
H163 |
C16 |
C15 |
H162 |
234.8 |
240.0 |
H163 |
C16 |
C15 |
H161 |
125.3 |
120.0 |
H162 |
C16 |
C15 |
H161 |
250.5 |
240.0 |
H152 |
C15 |
N14 |
H14 |
79.1 |
239.9 |
N14 |
C15 |
H152 |
C16 |
236.2 |
120.0 |
N14 |
C15 |
H152 |
H151 |
118.0 |
240.1 |
C16 |
C15 |
H152 |
H151 |
241.8 |
120.0 |
H152 |
C15 |
C16 |
H163 |
54.8 |
300.0 |
H152 |
C15 |
C16 |
H162 |
180.0 |
60.0 |
H152 |
C15 |
C16 |
H161 |
289.5 |
180.0 |
H151 |
C15 |
N14 |
H14 |
188.5 |
120.0 |
N14 |
C15 |
H151 |
C16 |
123.8 |
240.0 |
N14 |
C15 |
H151 |
H152 |
242.0 |
120.0 |
C16 |
C15 |
H151 |
H152 |
118.2 |
239.9 |
H151 |
C15 |
C16 |
H163 |
305.3 |
60.0 |
H151 |
C15 |
C16 |
H162 |
70.5 |
180.0 |
H151 |
C15 |
C16 |
H161 |
180.0 |
300.0 |
H163 |
C16 |
C15 |
H152 |
54.8 |
300.0 |
H163 |
C16 |
C15 |
H151 |
305.3 |
60.0 |
C15 |
C16 |
H163 |
H162 |
125.2 |
120.0 |
C15 |
C16 |
H163 |
H161 |
234.8 |
239.9 |
H162 |
C16 |
H163 |
H161 |
109.6 |
120.0 |
H162 |
C16 |
C15 |
H152 |
180.0 |
60.0 |
H162 |
C16 |
C15 |
H151 |
70.5 |
180.0 |
C15 |
C16 |
H162 |
H163 |
236.3 |
240.1 |
C15 |
C16 |
H162 |
H161 |
118.1 |
120.1 |
H163 |
C16 |
H162 |
H161 |
241.8 |
240.0 |
H161 |
C16 |
C15 |
H152 |
289.5 |
180.0 |
H161 |
C16 |
C15 |
H151 |
180.0 |
300.0 |
C15 |
C16 |
H161 |
H163 |
123.7 |
120.0 |
C15 |
C16 |
H161 |
H162 |
241.9 |
240.0 |
H163 |
C16 |
H161 |
H162 |
118.2 |
120.0 |