PDB Chemical Component MSR
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MSR
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C12 |
C13 |
1.402 |
1.395 |
| C12 |
C11 |
1.414 |
1.394 |
| C12 |
H12 |
1.080 |
1.088 |
| C13 |
C14 |
1.401 |
1.395 |
| C13 |
H13 |
1.080 |
1.087 |
| C14 |
O17 |
1.355 |
1.361 |
| C14 |
C15 |
1.408 |
1.395 |
| O17 |
HO17 |
0.950 |
0.970 |
| C15 |
C16 |
1.404 |
1.395 |
| C15 |
H15 |
1.080 |
1.087 |
| C16 |
C11 |
1.414 |
1.395 |
| C16 |
H16 |
1.080 |
1.087 |
| C11 |
N3 |
1.350 |
1.384 |
| N3 |
C4 |
1.340 |
1.370 |
| N3 |
C2 |
1.332 |
1.372 |
| C4 |
C5 |
1.328 |
1.375 |
| C4 |
H4 |
1.080 |
1.082 |
| C5 |
NFE |
1.332 |
1.373 |
| C5 |
H5 |
1.080 |
1.081 |
| NFE |
C2 |
1.325 |
1.314 |
| C2 |
H2 |
1.080 |
1.083 |
Bond Angles for MSR
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C13 |
C12 |
C11 |
120.5 |
120.0 |
| C13 |
C12 |
H12 |
119.8 |
119.2 |
| C12 |
C13 |
C14 |
119.9 |
120.0 |
| C12 |
C13 |
H13 |
120.1 |
119.7 |
| C11 |
C12 |
H12 |
119.7 |
120.8 |
| C12 |
C11 |
C16 |
119.2 |
120.0 |
| C12 |
C11 |
N3 |
119.9 |
120.0 |
| C14 |
C13 |
H13 |
120.0 |
120.3 |
| C13 |
C14 |
O17 |
119.6 |
120.0 |
| C13 |
C14 |
C15 |
120.2 |
120.0 |
| O17 |
C14 |
C15 |
120.2 |
120.1 |
| C14 |
O17 |
HO17 |
109.5 |
110.3 |
| C14 |
C15 |
C16 |
120.0 |
120.0 |
| C14 |
C15 |
H15 |
120.0 |
120.3 |
| C16 |
C15 |
H15 |
120.0 |
119.6 |
| C15 |
C16 |
C11 |
120.2 |
120.0 |
| C15 |
C16 |
H16 |
119.9 |
119.2 |
| C11 |
C16 |
H16 |
119.9 |
120.8 |
| C16 |
C11 |
N3 |
120.8 |
120.0 |
| C11 |
N3 |
C4 |
126.9 |
126.6 |
| C11 |
N3 |
C2 |
125.9 |
126.5 |
| C4 |
N3 |
C2 |
107.1 |
106.9 |
| N3 |
C4 |
C5 |
108.2 |
105.1 |
| N3 |
C4 |
H4 |
125.9 |
122.6 |
| N3 |
C2 |
NFE |
108.8 |
112.1 |
| N3 |
C2 |
H2 |
125.6 |
122.4 |
| C5 |
C4 |
H4 |
125.9 |
132.3 |
| C4 |
C5 |
NFE |
108.2 |
111.1 |
| C4 |
C5 |
H5 |
125.9 |
127.6 |
| NFE |
C5 |
H5 |
125.9 |
121.3 |
| C5 |
NFE |
C2 |
107.7 |
104.7 |
| NFE |
C2 |
H2 |
125.6 |
125.5 |
Torsion Angles for MSR
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C11 |
C12 |
C13 |
H12 |
180.0 |
179.9 |
| C13 |
C12 |
C11 |
C16 |
359.5 |
0.0 |
| C13 |
C12 |
C11 |
N3 |
176.2 |
180.0 |
| C14 |
C13 |
C12 |
H13 |
180.0 |
180.0 |
| C12 |
C13 |
C14 |
O17 |
181.5 |
179.9 |
| C12 |
C13 |
C14 |
C15 |
0.4 |
0.0 |
| C13 |
C12 |
C11 |
H12 |
180.0 |
180.1 |
| C11 |
C12 |
C13 |
C14 |
0.1 |
360.0 |
| C11 |
C12 |
C13 |
H13 |
180.1 |
180.0 |
| C15 |
C16 |
C11 |
C12 |
0.5 |
360.0 |
| C12 |
C11 |
C16 |
H16 |
180.4 |
180.0 |
| C16 |
C11 |
C12 |
N3 |
183.3 |
180.0 |
| C12 |
C11 |
N3 |
C4 |
181.1 |
360.0 |
| C12 |
C11 |
N3 |
C2 |
359.7 |
180.0 |
| C13 |
C12 |
H12 |
C11 |
180.0 |
179.9 |
| H12 |
C12 |
C13 |
C14 |
180.0 |
180.1 |
| H12 |
C12 |
C13 |
H13 |
0.1 |
0.0 |
| H12 |
C12 |
C11 |
C16 |
179.5 |
179.9 |
| H12 |
C12 |
C11 |
N3 |
356.2 |
359.9 |
| C14 |
C13 |
C12 |
C11 |
0.1 |
360.0 |
| C14 |
C13 |
C12 |
H12 |
180.0 |
180.1 |
| C12 |
C13 |
C14 |
H13 |
180.0 |
180.0 |
| O17 |
C14 |
C13 |
C15 |
181.1 |
179.9 |
| C13 |
C14 |
O17 |
HO17 |
170.2 |
347.8 |
| C13 |
C14 |
C15 |
C16 |
359.6 |
360.0 |
| C13 |
C14 |
C15 |
H15 |
179.6 |
180.0 |
| H13 |
C13 |
C12 |
C11 |
180.1 |
180.0 |
| H13 |
C13 |
C12 |
H12 |
0.1 |
0.0 |
| C12 |
C13 |
H13 |
C14 |
180.0 |
180.0 |
| H13 |
C13 |
C14 |
O17 |
1.4 |
360.0 |
| H13 |
C13 |
C14 |
C15 |
180.4 |
180.0 |
| O17 |
C14 |
C13 |
H13 |
1.4 |
360.0 |
| C13 |
C14 |
O17 |
C15 |
178.9 |
180.1 |
| O17 |
C14 |
C15 |
C16 |
178.5 |
180.1 |
| O17 |
C14 |
C15 |
H15 |
358.5 |
0.1 |
| C15 |
C14 |
C13 |
H13 |
180.4 |
180.0 |
| C13 |
C14 |
C15 |
O17 |
181.1 |
179.9 |
| C15 |
C14 |
O17 |
HO17 |
351.3 |
167.7 |
| C16 |
C15 |
C14 |
H15 |
180.0 |
180.0 |
| C14 |
C15 |
C16 |
C11 |
360.0 |
0.0 |
| C14 |
C15 |
C16 |
H16 |
180.0 |
180.0 |
| HO17 |
O17 |
C14 |
C15 |
351.3 |
167.7 |
| C12 |
C11 |
C16 |
C15 |
0.5 |
360.0 |
| C14 |
C15 |
C16 |
H15 |
180.0 |
180.0 |
| C11 |
C16 |
C15 |
H16 |
180.0 |
180.0 |
| C15 |
C16 |
C11 |
N3 |
183.8 |
180.0 |
| C14 |
C15 |
H15 |
C16 |
180.0 |
180.0 |
| H15 |
C15 |
C16 |
C11 |
180.0 |
180.0 |
| H15 |
C15 |
C16 |
H16 |
360.0 |
0.0 |
| C16 |
C11 |
C12 |
H12 |
179.5 |
179.9 |
| C12 |
C11 |
C16 |
N3 |
176.6 |
180.0 |
| C11 |
C16 |
C15 |
H15 |
180.0 |
180.0 |
| C15 |
C16 |
C11 |
H16 |
180.0 |
180.0 |
| C16 |
C11 |
N3 |
C4 |
357.7 |
180.0 |
| C16 |
C11 |
N3 |
C2 |
176.3 |
360.0 |
| H16 |
C16 |
C15 |
H15 |
360.0 |
0.0 |
| C15 |
C16 |
H16 |
C11 |
180.0 |
180.0 |
| H16 |
C16 |
C11 |
N3 |
3.8 |
360.0 |
| N3 |
C11 |
C12 |
H12 |
356.2 |
359.9 |
| C12 |
C11 |
N3 |
C16 |
183.4 |
180.0 |
| N3 |
C11 |
C16 |
H16 |
3.8 |
360.0 |
| C4 |
N3 |
C11 |
C2 |
181.4 |
180.0 |
| C11 |
N3 |
C4 |
C5 |
178.7 |
180.0 |
| C11 |
N3 |
C4 |
H4 |
358.7 |
0.1 |
| C11 |
N3 |
C2 |
NFE |
181.2 |
180.0 |
| C11 |
N3 |
C2 |
H2 |
1.2 |
0.0 |
| C11 |
N3 |
C4 |
C2 |
178.8 |
180.0 |
| C4 |
N3 |
C2 |
NFE |
0.1 |
360.0 |
| C4 |
N3 |
C2 |
H2 |
180.0 |
180.1 |
| C5 |
C4 |
N3 |
H4 |
180.0 |
179.9 |
| N3 |
C4 |
C5 |
NFE |
0.1 |
0.0 |
| N3 |
C4 |
C5 |
H5 |
180.1 |
179.9 |
| C11 |
N3 |
C2 |
C4 |
181.2 |
180.0 |
| C2 |
N3 |
C4 |
C5 |
359.9 |
360.0 |
| C2 |
N3 |
C4 |
H4 |
179.8 |
180.1 |
| C5 |
NFE |
C2 |
N3 |
0.0 |
0.0 |
| NFE |
C2 |
N3 |
H2 |
180.0 |
179.9 |
| C5 |
C4 |
N3 |
C2 |
359.9 |
360.0 |
| N3 |
C4 |
C5 |
H4 |
180.0 |
180.1 |
| NFE |
C5 |
C4 |
H5 |
180.0 |
180.1 |
| C4 |
C5 |
NFE |
C2 |
359.9 |
360.0 |
| H4 |
C4 |
N3 |
C2 |
179.8 |
180.1 |
| N3 |
C4 |
H4 |
C5 |
180.0 |
179.9 |
| H4 |
C4 |
C5 |
NFE |
180.2 |
179.9 |
| H4 |
C4 |
C5 |
H5 |
0.1 |
359.9 |
| N3 |
C2 |
NFE |
C5 |
0.0 |
0.0 |
| NFE |
C5 |
C4 |
H4 |
180.2 |
179.9 |
| C4 |
C5 |
NFE |
H5 |
180.0 |
179.9 |
| C5 |
NFE |
C2 |
H2 |
180.1 |
180.0 |
| H5 |
C5 |
C4 |
H4 |
0.1 |
359.9 |
| C4 |
C5 |
H5 |
NFE |
180.0 |
180.1 |
| H5 |
C5 |
NFE |
C2 |
179.9 |
180.0 |
| N3 |
C2 |
NFE |
H2 |
180.0 |
180.1 |
| C2 |
NFE |
C5 |
H5 |
179.9 |
180.0 |
| N3 |
C2 |
H2 |
NFE |
180.0 |
179.9 |