PDB Chemical Component MSN

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MSN

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C5	N5	1.465	1.469
C5	C4	1.516	1.549
C5	C1	1.522	1.543
C5	H5	1.100	1.090
N5	HN51	1.000	1.009
N5	HN52	1.000	1.009
C4	O4	1.430	1.429
C4	C3	1.533	1.549
C4	H4	1.100	1.090
O4	HO4	0.950	0.967
C3	O3	1.424	1.429
C3	C2	1.525	1.544
C3	H3	1.100	1.089
O3	HO3	0.950	0.967
C2	O2	1.429	1.429
C2	C1	1.541	1.540
C2	H2	1.100	1.090
O2	HO2	0.950	0.967
C1	S6	1.797	1.814
C1	H1	1.100	1.090
S6	C7	1.800	1.814
C7	H71	1.101	1.090
C7	H72	1.100	1.091
C7	H73	1.100	1.091

Bond Angles for MSN

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N5	C5	C4	107.0	110.6
N5	C5	C1	109.9	110.5
N5	C5	H5	109.8	110.5
C5	N5	HN51	109.5	106.7
C5	N5	HN52	109.5	106.7
C4	C5	C1	106.0	104.2
C4	C5	H5	113.4	110.5
C5	C4	O4	114.5	110.7
C5	C4	C3	101.9	102.8
C5	C4	H4	113.3	110.7
C1	C5	H5	110.6	110.4
C5	C1	C2	107.4	106.6
C5	C1	S6	103.5	110.1
C5	C1	H1	114.1	110.0
HN51	N5	HN52	109.4	106.7
O4	C4	C3	114.9	111.0
O4	C4	H4	99.9	110.7
C4	O4	HO4	109.5	106.8
C3	C4	H4	112.9	110.7
C4	C3	O3	113.8	110.5
C4	C3	C2	113.0	104.2
C4	C3	H3	103.2	110.5
O3	C3	C2	107.4	110.6
O3	C3	H3	109.3	110.5
C3	O3	HO3	109.5	106.9
C2	C3	H3	110.1	110.5
C3	C2	O2	123.5	110.1
C3	C2	C1	95.7	106.5
C3	C2	H2	115.5	110.0
O2	C2	C1	121.4	110.1
O2	C2	H2	84.8	110.0
C2	O2	HO2	109.5	106.8
C1	C2	H2	117.9	110.0
C2	C1	S6	108.3	110.0
C2	C1	H1	109.8	110.0
S6	C1	H1	113.3	110.0
C1	S6	C7	103.9	100.0
S6	C7	H71	109.5	109.5
S6	C7	H72	109.5	109.5
S6	C7	H73	109.5	109.5
H71	C7	H72	109.5	109.5
H71	C7	H73	109.4	109.5
H72	C7	H73	109.5	109.4

Torsion Angles for MSN

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C4	C5	N5	C1	245.3	245.1
C4	C5	N5	H5	123.4	122.7
N5	C5	C4	O4	4.6	38.1
N5	C5	C4	C3	129.3	156.7
N5	C5	C4	H4	250.9	275.0
C1	C5	N5	H5	238.1	237.5
N5	C5	C1	C2	210.6	217.6
N5	C5	C1	S6	96.2	98.3
N5	C5	C1	H1	332.6	336.9
HN51	N5	C5	HN52	240.0	246.2
N5	C5	C4	C1	117.3	118.7
N5	C5	C4	H5	238.8	237.3
C4	C5	N5	HN51	263.5	65.2
C4	C5	N5	HN52	23.5	179.0
C1	C5	C4	H5	121.6	118.6
C4	C5	C1	C2	325.9	336.5
C4	C5	C1	S6	211.5	217.1
C4	C5	C1	H1	87.9	95.7
O4	C4	C5	C3	235.3	241.4
O4	C4	C5	H4	113.7	123.1
C5	C4	O4	HO4	83.1	180.0
C3	C4	C5	H4	238.4	241.7
C5	C4	C3	O3	251.2	203.2
C5	C4	C3	C2	14.0	322.0
C5	C4	C3	H3	132.9	80.7
N5	C5	C1	C4	244.7	241.2
N5	C5	C1	H5	121.4	122.5
C1	C5	N5	HN51	18.2	180.0
C1	C5	N5	HN52	138.2	293.8
C4	C5	C1	H5	236.7	241.3
C1	C5	C4	O4	247.3	279.4
C1	C5	C4	C3	12.0	38.0
C1	C5	C4	H4	133.6	156.2
C3	C2	C1	C5	39.0	359.9
O2	C2	C1	C5	174.4	119.3
C5	C1	C2	H2	276.2	240.7
C2	C1	C5	S6	114.4	119.3
C2	C1	C5	H1	238.0	240.7
S6	C1	C5	H1	123.6	121.4
C5	C1	S6	C7	307.7	184.3
N5	C5	H5	C4	119.6	122.8
N5	C5	H5	C1	238.5	237.5
H5	C5	N5	HN51	140.1	302.5
H5	C5	N5	HN52	260.1	56.3
C4	C5	H5	C1	118.9	114.7
H5	C5	C4	O4	125.7	160.8
H5	C5	C4	C3	250.4	279.3
H5	C5	C4	H4	12.1	37.6
H5	C5	C1	C2	89.2	95.1
H5	C5	C1	S6	334.8	335.8
H5	C5	C1	H1	211.2	214.4
HN51	N5	C5	C4	263.5	65.2
HN51	N5	C5	C1	18.2	180.0
HN51	N5	C5	H5	140.1	302.5
C5	N5	HN51	HN52	120.0	113.7
HN52	N5	C5	C4	23.5	179.0
HN52	N5	C5	C1	138.2	293.8
HN52	N5	C5	H5	260.1	56.3
C5	N5	HN52	HN51	240.0	246.3
O4	C4	C5	C1	247.3	279.4
O4	C4	C5	H5	125.7	160.8
C5	C4	O4	C3	117.5	113.5
C5	C4	O4	H4	238.6	236.8
C3	C4	O4	H4	121.1	123.4
O4	C4	C3	O3	15.7	321.6
O4	C4	C3	C2	138.5	80.4
O4	C4	C3	H3	257.4	199.1
C3	C4	C5	C1	12.0	38.0
C3	C4	C5	H5	250.4	279.3
C5	C4	C3	O4	235.5	241.6
C5	C4	C3	H4	121.9	118.3
O4	C4	C3	H4	246.4	236.7
C3	C4	O4	HO4	325.6	66.6
O3	C3	C4	C2	237.2	241.3
O3	C3	C4	H3	118.3	122.5
C4	C3	O3	HO3	182.8	298.6
C2	C3	C4	H3	241.1	241.3
C4	C3	C2	O2	193.4	264.3
C4	C3	C2	C1	327.4	23.7
C4	C3	C2	H2	92.2	142.9
H4	C4	C5	C1	133.6	156.2
H4	C4	C5	H5	12.1	37.6
C5	C4	H4	O4	122.2	123.2
C5	C4	H4	C3	244.7	246.7
O4	C4	H4	C3	122.5	123.5
H4	C4	O4	HO4	204.5	303.2
H4	C4	C3	O3	129.3	85.0
H4	C4	C3	C2	252.1	203.7
H4	C4	C3	H3	11.0	322.5
HO4	O4	C4	C3	325.6	66.6
HO4	O4	C4	H4	204.5	303.2
O3	C3	C4	H4	129.3	85.0
C4	C3	O3	C2	125.8	114.8
C4	C3	O3	H3	245.3	237.5
C2	C3	O3	H3	119.5	122.7
O3	C3	C2	O2	319.7	23.0
O3	C3	C2	C1	93.7	142.4
O3	C3	C2	H2	218.4	261.6
C5	C1	C2	C3	39.0	359.9
C2	C3	C4	H4	252.1	203.7
C4	C3	C2	O3	233.7	241.3
C4	C3	C2	H3	114.8	118.7
O3	C3	C2	H3	241.1	237.4
C2	C3	O3	HO3	57.0	183.8
O2	C2	C3	C1	226.0	240.6
O2	C2	C3	H2	101.2	121.4
C3	C2	O2	HO2	261.0	298.6
C1	C2	C3	H2	235.3	240.8
C3	C2	C1	S6	150.2	119.2
C3	C2	C1	H1	274.4	240.6
H3	C3	C4	H4	11.0	322.5
C4	C3	H3	O3	121.4	122.5
C4	C3	H3	C2	239.1	245.2
O3	C3	H3	C2	117.7	122.7
H3	C3	O3	HO3	297.5	61.1
H3	C3	C2	O2	78.6	145.6
H3	C3	C2	C1	212.7	265.0
H3	C3	C2	H2	337.4	24.2
HO3	O3	C3	C2	57.0	183.8
HO3	O3	C3	H3	297.5	61.1
C5	C1	C2	O2	174.4	119.3
O2	C2	C3	H3	78.6	145.6
C3	C2	O2	C1	123.1	117.2
C3	C2	O2	H2	242.8	238.6
C1	C2	O2	H2	119.7	121.4
O2	C2	C1	S6	285.6	238.6
O2	C2	C1	H1	49.8	360.0
C2	C1	C5	H5	89.2	95.1
C5	C1	C2	S6	248.8	240.7
C5	C1	C2	H1	124.6	119.3
C1	C2	C3	H3	212.7	265.0
C3	C2	C1	O2	224.6	240.6
C3	C2	C1	H2	122.9	119.2
O2	C2	C1	H2	258.3	238.5
C1	C2	O2	HO2	137.9	181.4
S6	C1	C2	H1	235.8	238.6
C2	C1	S6	C7	193.9	67.1
H2	C2	C3	H3	337.4	24.2
C3	C2	H2	O2	124.8	121.4
C3	C2	H2	C1	247.8	243.0
O2	C2	H2	C1	123.0	121.5
H2	C2	O2	HO2	18.2	59.9
H2	C2	C1	S6	27.3	0.1
H2	C2	C1	H1	151.5	121.4
HO2	O2	C2	C1	137.9	181.4
HO2	O2	C2	H2	18.2	59.9
S6	C1	C5	H5	334.8	335.8
C5	C1	S6	C2	113.8	117.2
C5	C1	S6	H1	235.8	238.6
S6	C1	C2	H2	27.3	0.1
C2	C1	S6	H1	122.0	121.4
C1	S6	C7	H71	284.1	180.0
C1	S6	C7	H72	44.1	300.0
C1	S6	C7	H73	164.1	60.0
H1	C1	C5	H5	211.2	214.4
C5	C1	H1	C2	239.3	242.8
C5	C1	H1	S6	118.1	121.4
H1	C1	C2	H2	151.5	121.4
C2	C1	H1	S6	238.8	238.6
H1	C1	S6	C7	71.9	305.7
C7	S6	C1	H1	71.9	305.7
H71	C7	S6	H72	240.0	240.0
H71	C7	S6	H73	120.0	120.0
H72	C7	S6	H73	240.0	240.1
S6	C7	H71	H72	120.0	120.0
S6	C7	H71	H73	240.0	240.0
H72	C7	H71	H73	120.0	119.9
S6	C7	H72	H71	240.0	239.9
S6	C7	H72	H73	120.0	120.0
H71	C7	H72	H73	240.0	240.1
S6	C7	H73	H71	120.0	120.1
S6	C7	H73	H72	240.0	240.0
H71	C7	H73	H72	120.0	119.9