PDB Chemical Component MSI

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MSI

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
S1	N2	1.761	1.655
S1	O4	1.433	1.421
S1	O5	1.414	1.421
S1	C5	1.817	1.762
N1	C2	1.397	1.344
N1	C8	1.455	1.392
N1	C1	1.462	1.464
N2	C20	1.489	1.471
N2	C12	1.467	1.474
O1	C13	1.469	1.428
O1	C14	1.423	1.359
O2	C2	1.237	1.213
O3	C3	1.439	1.214
C2	C3	1.514	1.500
C3	C9	1.439	1.475
C4	C5	1.437	1.379
C4	C9	1.430	1.395
C4	HC4	1.103	1.080
C5	C6	1.438	1.385
C6	C7	1.423	1.382
C6	HC6	1.103	1.079
C7	C8	1.422	1.389
C7	HC7	1.103	1.080
C8	C9	1.396	1.404
C20	C10	1.526	1.543
C20	C13	1.581	1.530
C20	H20	1.115	1.091
C10	C11	1.512	1.551
C10	H101	1.115	1.090
C10	H102	1.114	1.090
C11	C12	1.517	1.548
C11	H111	1.115	1.090
C11	H112	1.115	1.091
C12	H121	1.116	1.089
C12	H122	1.115	1.091
C13	H131	1.115	1.090
C13	H132	1.114	1.089
C14	C15	1.436	1.387
C14	C19	1.428	1.387
C15	C16	1.429	1.381
C15	HC15	1.102	1.080
C16	C17	1.415	1.382
C16	HC16	1.102	1.079
C17	C18	1.435	1.383
C17	HC17	1.104	1.080
C18	C19	1.426	1.381
C18	HC18	1.104	1.079
C19	HC19	1.103	1.079
C1	HC11	1.114	1.090
C1	HC12	1.115	1.089
C1	HC13	1.114	1.090

Bond Angles for MSI

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N2	S1	O4	106.2	105.7
N2	S1	O5	99.5	105.8
N2	S1	C5	110.7	107.4
S1	N2	C20	118.4	125.7
S1	N2	C12	116.0	125.7
O4	S1	O5	120.6	125.4
O4	S1	C5	110.7	105.8
O5	S1	C5	108.4	105.7
S1	C5	C4	120.3	120.0
S1	C5	C6	119.6	119.9
C2	N1	C8	106.5	111.4
C2	N1	C1	126.4	124.2
N1	C2	O2	126.3	126.3
N1	C2	C3	111.4	107.5
C8	N1	C1	126.9	124.4
N1	C8	C7	132.4	131.4
N1	C8	C9	106.5	109.7
N1	C1	HC11	126.4	109.6
N1	C1	HC12	106.2	109.5
N1	C1	HC13	106.2	109.4
C20	N2	C12	104.8	108.7
N2	C20	C10	110.5	107.2
N2	C20	C13	115.4	110.3
N2	C20	H20	104.4	109.6
N2	C12	C11	109.8	104.9
N2	C12	H121	112.0	110.4
N2	C12	H122	112.1	110.3
C13	O1	C14	120.7	106.8
O1	C13	C20	125.8	109.5
O1	C13	H131	106.4	109.5
O1	C13	H132	106.4	109.5
O1	C14	C15	121.5	120.1
O1	C14	C19	119.6	120.1
O2	C2	C3	122.3	126.2
O3	C3	C2	111.5	127.6
O3	C3	C9	109.4	127.5
C2	C3	C9	100.0	104.8
C3	C9	C4	123.3	133.1
C3	C9	C8	114.2	106.5
C5	C4	C9	117.3	119.7
C5	C4	HC4	121.6	120.2
C4	C5	C6	120.2	120.1
C9	C4	HC4	121.1	120.1
C4	C9	C8	122.2	120.4
C5	C6	C7	121.0	120.6
C5	C6	HC6	120.0	119.7
C7	C6	HC6	119.0	119.6
C6	C7	C8	118.2	120.2
C6	C7	HC7	121.0	119.9
C8	C7	HC7	120.9	119.8
C7	C8	C9	121.1	118.9
C10	C20	C13	108.9	109.9
C10	C20	H20	111.5	109.9
C20	C10	C11	105.1	103.0
C20	C10	H101	113.8	110.8
C20	C10	H102	113.8	110.5
C13	C20	H20	106.1	109.9
C20	C13	H131	106.4	109.5
C20	C13	H132	106.5	109.5
C11	C10	H101	113.9	110.7
C11	C10	H102	113.9	110.7
C10	C11	C12	105.6	101.6
C10	C11	H111	113.7	111.0
C10	C11	H112	113.7	111.0
H101	C10	H102	96.7	110.8
C12	C11	H111	113.6	111.1
C12	C11	H112	113.6	111.0
C11	C12	H121	112.1	110.4
C11	C12	H122	112.1	110.3
H111	C11	H112	96.9	110.9
H121	C12	H122	98.3	110.4
H131	C13	H132	103.1	109.4
C15	C14	C19	118.8	119.8
C14	C15	C16	121.1	120.0
C14	C15	HC15	119.7	120.0
C14	C19	C18	120.2	120.0
C14	C19	HC19	120.0	120.0
C16	C15	HC15	119.2	120.0
C15	C16	C17	119.6	120.1
C15	C16	HC16	120.7	120.0
C17	C16	HC16	119.7	119.9
C16	C17	C18	120.0	120.1
C16	C17	HC17	119.3	120.0
C18	C17	HC17	120.7	119.9
C17	C18	C19	120.4	120.1
C17	C18	HC18	120.1	120.0
C19	C18	HC18	119.5	120.0
C18	C19	HC19	119.8	120.1
HC11	C1	HC12	106.2	109.4
HC11	C1	HC13	106.4	109.5
HC12	C1	HC13	103.2	109.4

Torsion Angles for MSI

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O4	S1	N2	O5	125.9	134.8
O4	S1	N2	C5	239.8	247.3
O5	S1	N2	C5	113.9	112.6
N2	S1	C5	C4	267.6	90.0
N2	S1	C5	C6	86.7	270.0
C20	N2	S1	C12	233.9	179.7
S1	N2	C20	C10	120.9	178.8
S1	N2	C20	C13	245.0	298.5
S1	N2	C20	H20	1.0	59.5
S1	N2	C12	C11	246.7	204.1
S1	N2	C12	H121	11.9	323.0
S1	N2	C12	H122	121.4	85.3
N2	S1	O4	O5	248.2	236.9
N2	S1	O4	C5	120.2	113.8
O4	S1	N2	C20	180.2	157.1
O4	S1	N2	C12	306.3	337.3
O5	S1	O4	C5	232.0	236.9
O4	S1	C5	C4	25.1	202.6
O4	S1	C5	C6	204.2	22.5
N2	S1	O5	O4	115.3	123.1
N2	S1	O5	C5	244.4	246.3
O5	S1	N2	C20	54.3	22.3
O5	S1	N2	C12	180.4	202.6
O4	S1	O5	C5	129.0	123.2
O5	S1	C5	C4	159.4	337.4
O5	S1	C5	C6	338.6	157.4
N2	S1	C5	O4	242.5	247.4
N2	S1	C5	O5	108.2	112.6
C5	S1	N2	C20	300.4	269.7
C5	S1	N2	C12	66.5	90.0
O4	S1	C5	O5	225.6	225.2
S1	C5	C4	C9	181.0	180.0
S1	C5	C4	HC4	0.9	360.0
C4	C5	S1	C6	180.9	180.1
S1	C5	C6	C7	180.7	180.0
S1	C5	C6	HC6	0.8	0.0
C8	N1	C2	C1	176.4	180.3
C2	N1	C8	C7	167.1	180.5
C2	N1	C8	C9	349.0	359.5
C2	N1	C1	HC11	180.1	0.0
C2	N1	C1	HC12	305.2	120.0
C2	N1	C1	HC13	54.7	240.0
O2	C2	N1	C3	179.9	180.0
O3	C3	C2	N1	236.6	180.0
N1	C2	C3	C9	352.2	360.0
C2	N1	C8	C1	183.6	179.7
C8	N1	C2	O2	191.8	180.3
C8	N1	C2	C3	11.9	0.3
C8	N1	C1	HC11	4.4	179.7
C8	N1	C1	HC12	129.6	299.7
C8	N1	C1	HC13	239.0	59.7
C3	C9	C8	N1	6.5	0.4
C4	C9	C8	N1	179.8	180.2
C6	C7	C8	N1	182.5	179.6
N1	C8	C7	HC7	2.4	359.3
C7	C8	N1	C9	178.1	181.0
C2	N1	C1	C8	175.7	180.3
C1	N1	C2	O2	15.4	0.0
C1	N1	C2	C3	195.5	180.0
C1	N1	C8	C7	343.4	0.8
C1	N1	C8	C9	165.3	179.8
HC11	C1	N1	HC12	234.8	240.0
HC11	C1	N1	HC13	125.4	120.0
HC12	C1	N1	HC13	250.6	240.1
C20	N2	S1	O4	180.2	157.1
C20	N2	S1	O5	54.3	22.3
C20	N2	S1	C5	300.4	269.7
S1	N2	C20	C12	131.3	180.2
C20	N2	C12	C11	19.3	24.3
C20	N2	C12	H121	144.6	143.2
C20	N2	C12	H122	254.0	265.5
O1	C13	C20	N2	47.5	180.5
C10	C20	N2	C13	236.0	240.3
C10	C20	N2	H20	119.9	119.3
N2	C20	C10	C11	357.7	338.1
N2	C20	C10	H101	123.0	219.7
N2	C20	C10	H102	232.5	96.5
C13	C20	N2	H20	244.0	238.9
N2	C20	C13	H131	282.3	300.5
N2	C20	C13	H132	172.7	60.5
C12	N2	S1	O4	306.3	337.3
C12	N2	S1	O5	180.4	202.6
C12	N2	S1	C5	66.5	90.0
S1	N2	C12	C20	227.3	179.8
C12	N2	C20	C10	349.7	358.6
C12	N2	C20	C13	113.7	118.3
C12	N2	C20	H20	229.7	239.3
C10	C11	C12	N2	338.9	323.0
N2	C12	C11	H111	213.7	81.1
N2	C12	C11	H112	104.2	205.0
C11	C12	N2	H121	234.7	241.1
C11	C12	N2	H122	125.3	118.8
H121	C12	N2	H122	250.6	237.7
N2	C20	C13	O1	47.5	180.5
C13	O1	C14	C15	51.9	180.0
C13	O1	C14	C19	229.7	359.7
C10	C20	C13	O1	172.3	298.5
O1	C13	C20	H20	292.4	59.6
C20	C13	O1	H131	234.8	120.0
C20	C13	O1	H132	125.3	240.0
H131	C13	O1	H132	250.5	120.0
C14	O1	C13	C20	51.3	180.0
C14	O1	C13	H131	176.5	60.0
C14	O1	C13	H132	286.0	300.0
C15	C14	O1	C19	182.2	180.3
O1	C14	C15	C16	178.0	180.0
O1	C14	C15	HC15	358.0	360.0
O1	C14	C19	C18	182.1	179.7
O1	C14	C19	HC19	2.1	0.4
O2	C2	N1	C8	191.8	180.3
O2	C2	N1	C1	15.4	0.0
N1	C2	O2	C3	180.1	180.0
O3	C3	C2	O2	56.7	0.0
O2	C2	C3	C9	172.3	180.0
N1	C2	C3	O3	236.6	180.0
O2	C2	C3	O3	56.7	0.0
C2	C3	O3	C9	109.7	180.0
O3	C3	C9	C4	304.4	359.9
O3	C3	C9	C8	117.7	179.7
C3	C2	N1	C8	11.9	0.3
C3	C2	N1	C1	195.5	180.0
N1	C2	C3	O2	179.9	180.0
O3	C3	C2	C9	244.4	180.0
C2	C3	C9	C4	187.2	180.0
C2	C3	C9	C8	0.5	359.8
N1	C8	C9	C3	6.5	0.4
O3	C3	C9	C2	117.2	180.0
C5	C4	C9	C3	170.2	180.0
C3	C9	C4	HC4	350.3	0.0
C4	C9	C3	C8	186.7	180.2
C7	C8	C9	C3	188.1	179.6
S1	C5	C4	C6	179.1	179.9
C3	C9	C4	C5	170.2	180.0
C9	C4	C5	HC4	180.1	180.0
C5	C4	C9	C8	357.5	0.3
C4	C5	C6	C7	359.9	360.0
C4	C5	C6	HC6	179.9	180.0
N1	C8	C9	C4	179.8	180.2
C3	C9	C4	C8	172.8	179.8
C5	C4	C9	HC4	179.9	180.0
C9	C4	C5	C6	1.8	0.0
C7	C8	C9	C4	1.5	359.4
C5	C4	HC4	C9	180.1	180.0
HC4	C4	C5	C6	181.8	180.0
HC4	C4	C9	C8	177.5	180.3
S1	C5	C6	C4	180.9	180.1
C6	C5	C4	C9	1.8	0.0
C6	C5	C4	HC4	181.8	180.0
C7	C6	C5	HC6	180.0	180.0
C5	C6	C7	C8	359.0	359.7
C5	C6	C7	HC7	179.0	180.0
N1	C8	C7	C6	182.5	179.6
C5	C6	C7	HC6	180.0	180.0
C8	C7	C6	HC7	180.0	179.7
C6	C7	C8	C9	0.4	0.6
C5	C6	HC6	C7	180.0	180.0
HC6	C6	C7	C8	178.9	179.7
HC6	C6	C7	HC7	359.0	360.0
C7	C8	N1	C1	343.4	0.8
N1	C8	C7	C9	182.1	179.0
C3	C9	C8	C7	188.1	179.6
C4	C9	C8	C7	1.5	359.4
C8	C7	C6	HC6	178.9	179.7
C6	C7	C8	HC7	180.0	180.3
HC7	C7	C6	HC6	359.0	360.0
C6	C7	HC7	C8	180.0	179.7
HC7	C7	C8	C9	180.3	180.3
C9	C8	N1	C1	165.3	179.8
N1	C8	C9	C7	178.4	180.8
C3	C9	C8	C4	186.6	180.2
C8	C9	C4	HC4	177.5	180.3
C9	C8	C7	HC7	180.3	180.3
C10	C20	N2	C12	349.7	358.6
N2	C20	C10	C13	127.7	119.9
N2	C20	C10	H20	244.4	241.0
O1	C13	C20	C10	172.3	298.5
C13	C20	C10	H20	116.8	121.1
C10	C20	C13	H131	47.1	58.6
C10	C20	C13	H132	297.6	178.5
C11	C10	C20	H101	234.8	118.5
C11	C10	C20	H102	125.2	241.7
C20	C10	C11	C12	13.6	35.3
C20	C10	C11	H111	138.9	277.2
C20	C10	C11	H112	248.4	153.4
H101	C10	C20	H102	250.5	123.2
C13	C20	N2	C12	113.7	118.3
N2	C20	C13	C10	235.1	242.0
N2	C20	C13	H20	115.0	120.9
C20	C13	O1	C14	51.3	180.0
O1	C13	C20	H131	125.2	240.0
O1	C13	C20	H132	234.8	120.0
C10	C20	C13	H20	239.9	238.9
C13	C20	C10	C11	230.0	218.2
C13	C20	C10	H101	355.3	99.8
C13	C20	C10	H102	104.8	336.6
H131	C13	C20	H132	109.5	240.1
H20	C20	N2	C12	229.7	239.3
N2	C20	H20	C10	119.3	117.6
N2	C20	H20	C13	237.7	238.7
C10	C20	H20	C13	118.4	121.1
H20	C20	C10	C11	113.3	97.2
H20	C20	C10	H101	238.5	338.7
H20	C20	C10	H102	348.0	215.5
H20	C20	C13	H131	167.2	179.6
H20	C20	C13	H132	57.7	299.6
N2	C12	C11	C10	338.9	323.0
C11	C10	C20	C13	230.0	218.2
C11	C10	C20	H20	113.3	97.2
C20	C10	C11	H101	125.2	241.5
C20	C10	C11	H102	234.8	118.2
H101	C10	C11	H102	109.6	236.7
C12	C11	C10	H111	234.7	118.1
C12	C11	C10	H112	125.2	241.9
C10	C11	C12	H121	213.7	204.1
C10	C11	C12	H122	104.2	81.8
H111	C11	C10	H112	250.5	123.8
H101	C10	C20	C13	355.3	99.8
H101	C10	C20	H20	238.5	338.7
C20	C10	H101	C11	239.6	113.7
C20	C10	H101	H102	119.7	237.0
C11	C10	H101	H102	240.1	123.3
H101	C10	C11	C12	248.4	153.9
H101	C10	C11	H111	13.7	35.7
H101	C10	C11	H112	123.2	271.9
H102	C10	C20	C13	104.8	336.6
H102	C10	C20	H20	348.0	215.5
C20	C10	H102	C11	120.4	246.5
C20	C10	H102	H101	240.3	123.2
C11	C10	H102	H101	119.9	236.7
H102	C10	C11	C12	138.8	277.1
H102	C10	C11	H111	264.1	159.0
H102	C10	C11	H112	13.6	35.2
N2	C12	C11	H121	125.2	118.9
N2	C12	C11	H122	234.7	241.2
C12	C11	C10	H101	248.4	153.9
C12	C11	C10	H102	138.8	277.1
C10	C11	C12	H111	125.3	241.9
C10	C11	C12	H112	234.8	118.0
H111	C11	C12	H112	109.5	236.1
H121	C12	C11	H122	109.5	122.3
H111	C11	C10	H101	13.7	35.7
H111	C11	C10	H102	264.1	159.0
C10	C11	H111	C12	239.1	112.2
C10	C11	H111	H112	119.6	236.2
C12	C11	H111	H112	240.5	123.9
H111	C11	C12	H121	88.4	322.1
H111	C11	C12	H122	338.9	199.9
H112	C11	C10	H101	123.2	271.9
H112	C11	C10	H102	13.6	35.2
C10	C11	H112	C12	120.8	247.8
C10	C11	H112	H111	240.4	123.9
C12	C11	H112	H111	119.6	236.0
H112	C11	C12	H121	338.9	86.0
H112	C11	C12	H122	229.4	323.8
N2	C12	H121	C11	236.0	244.5
N2	C12	H121	H122	118.0	122.3
H121	C12	C11	H111	88.4	322.1
H121	C12	C11	H112	338.9	86.0
C11	C12	H121	H122	242.0	237.8
N2	C12	H122	C11	124.0	115.4
N2	C12	H122	H121	242.0	237.7
H122	C12	C11	H111	338.9	199.9
H122	C12	C11	H112	229.4	323.8
C11	C12	H122	H121	118.1	122.3
H131	C13	O1	C14	176.5	60.0
O1	C13	H131	C20	223.7	120.0
O1	C13	H131	H132	111.8	240.0
H131	C13	C20	H20	167.2	179.6
C20	C13	H131	H132	248.1	120.0
H132	C13	O1	C14	286.0	300.0
O1	C13	H132	C20	136.3	240.0
O1	C13	H132	H131	248.2	120.0
H132	C13	C20	H20	57.7	299.6
C20	C13	H132	H131	111.9	240.0
O1	C14	C15	C19	177.8	179.7
C15	C14	C19	C18	359.9	359.4
C15	C14	C19	HC19	179.9	180.0
C16	C15	C14	HC15	180.0	180.0
C14	C15	C16	C17	359.9	360.0
C14	C15	C16	HC16	179.9	180.0
O1	C14	C19	C15	182.2	180.3
C19	C14	C15	C16	0.2	0.3
C19	C14	C15	HC15	180.2	180.3
C17	C18	C19	C14	359.9	0.6
C14	C19	C18	HC18	179.9	180.4
C18	C19	C14	HC19	180.0	179.4
C16	C15	C14	C19	0.2	0.3
C14	C15	C16	HC15	180.0	180.0
C17	C16	C15	HC16	180.0	180.0
C15	C16	C17	C18	359.9	360.0
C15	C16	C17	HC17	179.9	180.0
HC15	C15	C14	C19	180.2	180.3
C14	C15	HC15	C16	180.0	180.0
HC15	C15	C16	C17	179.9	180.0
HC15	C15	C16	HC16	359.9	360.0
C17	C16	C15	HC15	179.9	180.0
C15	C16	C17	HC16	180.0	180.0
C18	C17	C16	HC17	180.0	180.0
C16	C17	C18	C19	0.2	359.7
C16	C17	C18	HC18	180.2	179.9
HC16	C16	C15	HC15	359.9	360.0
C15	C16	HC16	C17	180.0	180.0
HC16	C16	C17	C18	179.9	180.0
HC16	C16	C17	HC17	359.9	0.0
C14	C19	C18	C17	359.9	0.6
C18	C17	C16	HC16	179.9	180.0
C16	C17	C18	HC17	180.0	180.0
C19	C18	C17	HC18	180.0	179.8
C17	C18	C19	HC19	179.9	180.0
HC17	C17	C16	HC16	359.9	0.0
C16	C17	HC17	C18	180.0	180.0
HC17	C17	C18	C19	180.2	179.7
HC17	C17	C18	HC18	0.2	359.9
C14	C19	C18	HC19	180.0	180.6
C19	C18	C17	HC17	180.2	179.7
C17	C18	C19	HC18	180.0	180.2
HC18	C18	C17	HC17	0.2	359.9
C17	C18	HC18	C19	180.0	179.8
HC18	C18	C19	HC19	359.9	359.7
C14	C19	HC19	C18	180.0	179.4
HC19	C19	C18	HC18	359.9	359.7
N1	C1	HC11	HC12	125.2	120.0
N1	C1	HC11	HC13	234.7	240.0
HC12	C1	HC11	HC13	109.5	119.9
N1	C1	HC12	HC11	223.3	239.9
N1	C1	HC12	HC13	111.5	119.9
HC11	C1	HC12	HC13	248.3	240.1
N1	C1	HC13	HC11	136.8	120.1
N1	C1	HC13	HC12	248.5	240.0
HC11	C1	HC13	HC12	111.6	119.9