PDB Chemical Component MSB
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MSB
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| S |
OB1 |
1.425 |
1.450 |
| S |
OB2 |
1.421 |
1.451 |
| S |
CG |
1.751 |
1.746 |
| CG |
CD1 |
1.390 |
1.395 |
| CG |
CD2 |
1.390 |
1.395 |
| CD1 |
CE1 |
1.393 |
1.395 |
| CD1 |
HD1 |
1.082 |
1.087 |
| CD2 |
CE2 |
1.400 |
1.395 |
| CD2 |
HD2 |
1.081 |
1.086 |
| CE1 |
CZ |
1.400 |
1.394 |
| CE1 |
HE1 |
1.081 |
1.088 |
| CE2 |
CZ |
1.404 |
1.395 |
| CE2 |
HE2 |
1.080 |
1.087 |
| CZ |
OH |
1.377 |
1.362 |
| OH |
CH |
1.421 |
1.427 |
| CH |
HH1 |
1.079 |
1.093 |
| CH |
HH2 |
1.081 |
1.093 |
| CH |
HH3 |
1.078 |
1.093 |
| HS1 |
S |
1.300 |
1.349 |
Bond Angles for MSB
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| OB1 |
S |
OB2 |
117.4 |
122.2 |
| OB1 |
S |
CG |
110.1 |
107.5 |
| OB2 |
S |
CG |
107.4 |
107.6 |
| S |
CG |
CD1 |
118.9 |
120.0 |
| S |
CG |
CD2 |
120.2 |
120.0 |
| CD1 |
CG |
CD2 |
120.9 |
120.0 |
| CG |
CD1 |
CE1 |
119.9 |
120.0 |
| CG |
CD1 |
HD1 |
119.7 |
120.6 |
| CG |
CD2 |
CE2 |
119.7 |
120.0 |
| CG |
CD2 |
HD2 |
119.6 |
120.6 |
| CE1 |
CD1 |
HD1 |
120.5 |
119.4 |
| CD1 |
CE1 |
CZ |
119.9 |
120.0 |
| CD1 |
CE1 |
HE1 |
120.1 |
119.6 |
| CE2 |
CD2 |
HD2 |
120.7 |
119.4 |
| CD2 |
CE2 |
CZ |
119.6 |
120.0 |
| CD2 |
CE2 |
HE2 |
120.1 |
119.7 |
| CZ |
CE1 |
HE1 |
120.0 |
120.4 |
| CE1 |
CZ |
CE2 |
120.1 |
120.0 |
| CE1 |
CZ |
OH |
119.6 |
120.0 |
| CZ |
CE2 |
HE2 |
120.2 |
120.4 |
| CE2 |
CZ |
OH |
120.3 |
119.9 |
| CZ |
OH |
CH |
115.5 |
117.0 |
| OH |
CH |
HH1 |
109.5 |
109.5 |
| OH |
CH |
HH2 |
109.4 |
109.5 |
| OH |
CH |
HH3 |
109.5 |
109.0 |
| HH1 |
CH |
HH2 |
109.5 |
110.0 |
| HH1 |
CH |
HH3 |
109.2 |
109.4 |
| HH2 |
CH |
HH3 |
109.7 |
109.3 |
Torsion Angles for MSB
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| OB2 |
S |
OB1 |
CG |
236.8 |
124.9 |
| OB1 |
S |
CG |
CD1 |
220.7 |
156.6 |
| OB1 |
S |
CG |
CD2 |
40.2 |
336.7 |
| OB1 |
S |
OB2 |
CG |
124.6 |
235.1 |
| OB2 |
S |
CG |
CD1 |
349.7 |
23.4 |
| OB2 |
S |
CG |
CD2 |
169.1 |
203.4 |
| OB1 |
S |
CG |
OB2 |
231.1 |
133.3 |
| CD1 |
CG |
S |
CD2 |
180.6 |
180.0 |
| S |
CG |
CD1 |
CE1 |
179.0 |
180.1 |
| S |
CG |
CD1 |
HD1 |
358.8 |
0.1 |
| S |
CG |
CD2 |
CE2 |
180.5 |
179.9 |
| S |
CG |
CD2 |
HD2 |
1.7 |
360.0 |
| S |
CG |
CD1 |
CD2 |
179.4 |
180.0 |
| CD1 |
CG |
CD2 |
CE2 |
359.9 |
360.0 |
| CD1 |
CG |
CD2 |
HD2 |
181.1 |
180.0 |
| CE1 |
CD1 |
CG |
HD1 |
180.2 |
180.0 |
| CG |
CD1 |
CE1 |
CZ |
0.5 |
360.0 |
| CG |
CD1 |
CE1 |
HE1 |
180.0 |
180.0 |
| S |
CG |
CD2 |
CD1 |
180.6 |
180.0 |
| CD2 |
CG |
CD1 |
CE1 |
359.6 |
0.0 |
| CD2 |
CG |
CD1 |
HD1 |
179.3 |
180.0 |
| CE2 |
CD2 |
CG |
HD2 |
178.8 |
180.0 |
| CG |
CD2 |
CE2 |
CZ |
0.5 |
0.0 |
| CG |
CD2 |
CE2 |
HE2 |
179.9 |
180.0 |
| CE1 |
CD1 |
CG |
CD2 |
359.6 |
0.0 |
| CG |
CD1 |
CE1 |
HD1 |
179.8 |
180.0 |
| CZ |
CE1 |
CD1 |
HE1 |
180.5 |
180.0 |
| CD1 |
CE1 |
CZ |
CE2 |
360.0 |
0.0 |
| CD1 |
CE1 |
CZ |
OH |
180.5 |
180.0 |
| HD1 |
CD1 |
CG |
CD2 |
179.3 |
180.0 |
| CG |
CD1 |
HD1 |
CE1 |
180.2 |
180.0 |
| HD1 |
CD1 |
CE1 |
CZ |
180.7 |
180.0 |
| HD1 |
CD1 |
CE1 |
HE1 |
0.2 |
360.0 |
| CG |
CD2 |
CE2 |
HD2 |
181.2 |
180.0 |
| CE1 |
CZ |
CE2 |
CD2 |
359.5 |
360.0 |
| CZ |
CE2 |
CD2 |
HE2 |
180.6 |
180.0 |
| CD2 |
CE2 |
CZ |
OH |
179.0 |
180.0 |
| CG |
CD2 |
HD2 |
CE2 |
178.8 |
180.0 |
| HD2 |
CD2 |
CE2 |
CZ |
179.3 |
180.0 |
| HD2 |
CD2 |
CE2 |
HE2 |
358.7 |
360.0 |
| CZ |
CE1 |
CD1 |
HD1 |
180.7 |
180.0 |
| CD1 |
CE1 |
CZ |
HE1 |
179.5 |
180.0 |
| CD2 |
CE2 |
CZ |
CE1 |
359.5 |
360.0 |
| CE1 |
CZ |
CE2 |
HE2 |
180.1 |
180.0 |
| CE2 |
CZ |
CE1 |
OH |
179.5 |
180.0 |
| CE1 |
CZ |
OH |
CH |
41.3 |
360.0 |
| HE1 |
CE1 |
CD1 |
HD1 |
0.2 |
360.0 |
| CD1 |
CE1 |
HE1 |
CZ |
180.5 |
180.0 |
| HE1 |
CE1 |
CZ |
CE2 |
180.5 |
180.0 |
| HE1 |
CE1 |
CZ |
OH |
1.0 |
360.0 |
| CZ |
CE2 |
CD2 |
HD2 |
179.3 |
180.0 |
| CD2 |
CE2 |
CZ |
HE2 |
179.4 |
180.0 |
| CE2 |
CZ |
CE1 |
HE1 |
180.5 |
180.0 |
| CE1 |
CZ |
CE2 |
OH |
180.6 |
180.0 |
| CE2 |
CZ |
OH |
CH |
221.9 |
179.9 |
| HE2 |
CE2 |
CD2 |
HD2 |
358.7 |
360.0 |
| CD2 |
CE2 |
HE2 |
CZ |
180.6 |
180.0 |
| HE2 |
CE2 |
CZ |
OH |
359.6 |
0.1 |
| OH |
CZ |
CE1 |
HE1 |
1.0 |
360.0 |
| CE1 |
CZ |
OH |
CE2 |
179.5 |
180.0 |
| OH |
CZ |
CE2 |
HE2 |
359.6 |
0.1 |
| CZ |
OH |
CH |
HH1 |
157.6 |
252.1 |
| CZ |
OH |
CH |
HH2 |
277.7 |
131.4 |
| CZ |
OH |
CH |
HH3 |
37.9 |
11.8 |
| HH1 |
CH |
OH |
HH2 |
239.9 |
120.8 |
| HH1 |
CH |
OH |
HH3 |
119.7 |
240.3 |
| HH2 |
CH |
OH |
HH3 |
239.8 |
119.6 |
| OH |
CH |
HH1 |
HH2 |
120.0 |
239.6 |
| OH |
CH |
HH1 |
HH3 |
240.1 |
119.4 |
| HH2 |
CH |
HH1 |
HH3 |
120.1 |
239.9 |
| OH |
CH |
HH2 |
HH1 |
239.9 |
120.4 |
| OH |
CH |
HH2 |
HH3 |
120.2 |
240.6 |
| HH1 |
CH |
HH2 |
HH3 |
240.2 |
120.2 |
| OH |
CH |
HH3 |
HH1 |
119.9 |
240.2 |
| OH |
CH |
HH3 |
HH2 |
239.9 |
119.7 |
| HH1 |
CH |
HH3 |
HH2 |
120.0 |
239.4 |