PDB Chemical Component MS5

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MS5

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
OAE	SAZ	1.437	1.421
SAZ	OAD	1.425	1.420
SAZ	NAC	1.597	1.656
SAZ	OAR	1.624	1.521
OAR	CAX	1.369	1.360
CAX	CAJ	1.394	1.384
CAX	CAW	1.380	1.391
CAJ	CAU	1.395	1.387
CAW	OAQ	1.362	1.360
CAW	CAK	1.395	1.384
OAQ	CAB	1.428	1.428
CAK	CAV	1.386	1.387
CAV	CAO	1.510	1.507
CAV	CAU	1.392	1.378
CAO	NAY	1.471	1.466
CAU	CAL	1.513	1.508
CAL	CAM	1.533	1.529
CAM	NAY	1.482	1.469
NAY	CAN	1.481	1.469
CAN	CAS	1.516	1.507
CAS	CAI	1.396	1.382
CAS	CAG	1.399	1.383
CAI	CAT	1.395	1.387
CAG	CAF	1.398	1.382
CAF	CAH	1.393	1.382
CAH	CAT	1.402	1.387
CAT	OAP	1.378	1.359
OAP	CAA	1.429	1.429
NAC	HAC1	0.999	0.969
NAC	HAC2	1.000	0.970
CAJ	HAJ	1.080	1.080
CAK	HAK	1.080	1.080
CAB	HAB1	1.100	1.091
CAB	HAB2	1.100	1.089
CAB	HAB3	1.100	1.090
CAO	HAO1	1.100	1.091
CAO	HAO2	1.100	1.090
CAL	HAL1	1.100	1.090
CAL	HAL2	1.100	1.090
CAM	HAM1	1.100	1.090
CAM	HAM2	1.099	1.090
CAN	HAN1	1.100	1.091
CAN	HAN2	1.100	1.090
CAI	HAI	1.080	1.080
CAG	HAG	1.080	1.081
CAF	HAF	1.080	1.080
CAH	HAH	1.080	1.080
CAA	HAA1	1.100	1.090
CAA	HAA2	1.100	1.089
CAA	HAA3	1.100	1.090

Bond Angles for MS5

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
OAE	SAZ	OAD	112.0	123.2
OAE	SAZ	NAC	112.5	106.3
OAE	SAZ	OAR	109.2	106.4
OAD	SAZ	NAC	112.1	106.4
OAD	SAZ	OAR	103.2	106.4
NAC	SAZ	OAR	107.3	107.2
SAZ	NAC	HAC1	109.5	120.1
SAZ	NAC	HAC2	109.5	119.9
SAZ	OAR	CAX	125.2	114.1
OAR	CAX	CAJ	119.2	120.1
OAR	CAX	CAW	120.0	120.2
CAJ	CAX	CAW	120.7	119.7
CAX	CAJ	CAU	119.2	120.4
CAX	CAJ	HAJ	120.4	119.8
CAX	CAW	OAQ	119.7	120.2
CAX	CAW	CAK	120.2	119.7
CAJ	CAU	CAV	119.8	120.0
CAJ	CAU	CAL	118.4	118.3
CAU	CAJ	HAJ	120.4	119.8
OAQ	CAW	CAK	120.1	120.1
CAW	OAQ	CAB	121.3	117.0
CAW	CAK	CAV	119.3	120.4
CAW	CAK	HAK	120.4	119.8
OAQ	CAB	HAB1	109.5	109.4
OAQ	CAB	HAB2	109.5	109.5
OAQ	CAB	HAB3	109.4	109.5
CAK	CAV	CAO	118.3	118.3
CAK	CAV	CAU	120.8	119.9
CAV	CAK	HAK	120.4	119.8
CAO	CAV	CAU	120.9	121.8
CAV	CAO	NAY	110.3	110.5
CAV	CAO	HAO1	109.2	109.3
CAV	CAO	HAO2	109.0	109.3
CAV	CAU	CAL	121.8	121.7
CAO	NAY	CAM	111.0	110.5
CAO	NAY	CAN	106.3	111.0
NAY	CAO	HAO1	109.2	109.3
NAY	CAO	HAO2	109.0	109.3
CAU	CAL	CAM	113.3	109.9
CAU	CAL	HAL1	108.2	109.4
CAU	CAL	HAL2	107.3	109.4
CAL	CAM	NAY	112.7	108.6
CAM	CAL	HAL1	108.2	109.3
CAM	CAL	HAL2	107.3	109.4
CAL	CAM	HAM1	108.4	109.7
CAL	CAM	HAM2	107.7	109.6
CAM	NAY	CAN	115.2	111.1
NAY	CAM	HAM1	108.4	109.5
NAY	CAM	HAM2	107.7	109.6
NAY	CAN	CAS	116.8	109.5
NAY	CAN	HAN1	107.1	109.4
NAY	CAN	HAN2	105.4	109.5
CAN	CAS	CAI	119.8	120.0
CAN	CAS	CAG	119.9	120.0
CAS	CAN	HAN1	107.1	109.4
CAS	CAN	HAN2	105.4	109.4
CAI	CAS	CAG	120.3	120.0
CAS	CAI	CAT	120.0	119.9
CAS	CAI	HAI	120.0	120.0
CAS	CAG	CAF	119.8	120.1
CAS	CAG	HAG	120.1	119.9
CAI	CAT	CAH	119.6	119.9
CAI	CAT	OAP	120.7	120.0
CAT	CAI	HAI	120.0	120.1
CAG	CAF	CAH	119.9	120.1
CAF	CAG	HAG	120.1	119.9
CAG	CAF	HAF	120.1	120.0
CAF	CAH	CAT	120.4	119.9
CAH	CAF	HAF	120.1	119.9
CAF	CAH	HAH	119.8	120.0
CAH	CAT	OAP	119.7	120.1
CAT	CAH	HAH	119.7	120.1
CAT	OAP	CAA	121.9	117.0
OAP	CAA	HAA1	109.5	109.4
OAP	CAA	HAA2	109.5	109.5
OAP	CAA	HAA3	109.5	109.5
HAC1	NAC	HAC2	109.5	120.0
HAB1	CAB	HAB2	109.5	109.5
HAB1	CAB	HAB3	109.5	109.4
HAB2	CAB	HAB3	109.5	109.5
HAO1	CAO	HAO2	110.1	109.3
HAL1	CAL	HAL2	112.5	109.4
HAM1	CAM	HAM2	112.0	109.8
HAN1	CAN	HAN2	115.3	109.5
HAA1	CAA	HAA2	109.5	109.5
HAA1	CAA	HAA3	109.5	109.4
HAA2	CAA	HAA3	109.4	109.5

Torsion Angles for MS5

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
OAD	SAZ	OAE	NAC	232.7	237.0
OAD	SAZ	OAE	OAR	113.7	123.0
NAC	SAZ	OAE	OAR	241.0	245.9
OAE	SAZ	NAC	HAC1	69.1	353.5
OAE	SAZ	NAC	HAC2	189.1	173.5
OAE	SAZ	OAR	CAX	323.1	321.5
OAE	SAZ	OAD	NAC	127.5	122.9
OAE	SAZ	OAD	OAR	242.6	237.0
NAC	SAZ	OAD	OAR	115.1	114.1
OAD	SAZ	NAC	HAC1	196.4	126.4
OAD	SAZ	NAC	HAC2	316.4	306.4
OAD	SAZ	OAR	CAX	203.8	188.5
OAE	SAZ	NAC	OAD	232.7	227.1
OAE	SAZ	NAC	OAR	120.1	113.5
OAD	SAZ	NAC	OAR	247.4	246.4
NAC	SAZ	OAR	CAX	85.3	74.9
HAC1	NAC	SAZ	HAC2	240.0	180.0
OAE	SAZ	OAR	OAD	119.3	133.0
OAE	SAZ	OAR	NAC	237.8	246.5
OAD	SAZ	OAR	NAC	118.5	113.6
OAR	SAZ	NAC	HAC1	308.9	240.0
OAR	SAZ	NAC	HAC2	68.9	60.0
SAZ	OAR	CAX	CAJ	98.1	90.0
SAZ	OAR	CAX	CAW	275.4	269.8
CAJ	CAX	OAR	CAW	182.8	180.2
OAR	CAX	CAJ	CAU	178.7	180.0
OAR	CAX	CAJ	HAJ	358.7	360.0
OAR	CAX	CAW	OAQ	1.6	359.9
OAR	CAX	CAW	CAK	181.8	179.9
OAR	CAX	CAJ	CAW	177.2	179.8
CAJ	CAX	CAW	OAQ	178.7	179.7
CAJ	CAX	CAW	CAK	359.0	359.7
CAX	CAJ	CAU	CAV	358.8	0.2
CAX	CAJ	CAU	CAL	179.2	180.5
CAU	CAJ	CAX	HAJ	180.0	180.0
OAR	CAX	CAW	CAJ	182.8	180.2
CAW	CAX	CAJ	CAU	1.5	0.1
CAW	CAX	CAJ	HAJ	181.5	180.2
OAQ	CAW	CAX	CAK	179.7	180.0
CAX	CAW	OAQ	CAB	135.7	180.0
CAX	CAW	CAK	CAV	0.1	0.1
CAX	CAW	CAK	HAK	180.1	180.0
CAU	CAJ	CAX	CAW	1.5	0.1
CAX	CAJ	CAU	HAJ	180.0	180.0
CAK	CAV	CAU	CAJ	0.4	359.5
CAO	CAV	CAU	CAJ	180.6	179.7
CAV	CAU	CAJ	CAL	179.6	179.7
CAJ	CAU	CAL	CAM	181.4	196.8
CAJ	CAU	CAL	HAL1	301.4	316.8
CAJ	CAU	CAL	HAL2	63.1	76.6
CAX	CAW	OAQ	CAK	180.3	180.0
OAQ	CAW	CAK	CAV	180.4	180.1
OAQ	CAW	CAK	HAK	0.4	0.0
CAW	OAQ	CAB	HAB1	127.2	180.0
CAW	OAQ	CAB	HAB2	247.2	300.0
CAW	OAQ	CAB	HAB3	7.2	60.0
CAX	CAW	CAK	OAQ	179.7	180.0
CAK	CAW	OAQ	CAB	315.4	0.0
CAW	CAK	CAV	CAO	179.9	180.2
CAW	CAK	CAV	CAU	0.2	0.3
CAV	CAK	CAW	HAK	180.0	180.0
CAB	OAQ	CAW	CAK	315.4	0.0
HAB1	CAB	OAQ	HAB2	240.0	240.0
HAB1	CAB	OAQ	HAB3	120.0	119.9
HAB2	CAB	OAQ	HAB3	240.0	239.9
CAJ	CAU	CAV	CAK	0.4	359.5
CAW	CAK	CAV	HAK	180.0	180.0
CAO	CAV	CAK	CAU	179.7	179.9
CAK	CAV	CAO	NAY	207.7	197.6
CAK	CAV	CAO	HAO1	327.7	317.9
CAK	CAV	CAO	HAO2	88.0	77.4
CAK	CAV	CAU	CAL	180.0	179.2
CAJ	CAU	CAV	CAO	180.6	179.7
CAK	CAV	CAO	CAU	180.3	180.1
CAO	CAV	CAK	HAK	359.9	0.2
CAO	CAV	CAU	CAL	0.2	359.3
CAV	CAO	NAY	CAM	302.4	307.7
CAV	CAO	NAY	CAN	176.4	184.0
NAY	CAO	CAV	HAO1	240.0	239.7
NAY	CAO	CAV	HAO2	119.7	120.2
HAO1	CAO	CAV	HAO2	239.7	240.5
CAJ	CAU	CAV	CAL	180.4	180.3
CAV	CAU	CAJ	HAJ	178.8	180.2
CAK	CAV	CAU	CAO	179.7	179.9
CAU	CAV	CAK	HAK	180.2	180.4
CAU	CAV	CAO	NAY	27.4	17.5
CAU	CAV	CAO	HAO1	147.4	137.7
CAU	CAV	CAO	HAO2	267.8	257.2
CAV	CAU	CAL	CAM	1.8	17.1
CAV	CAU	CAL	HAL1	121.8	137.1
CAV	CAU	CAL	HAL2	243.5	256.9
NAY	CAO	CAV	CAU	27.4	17.5
CAV	CAO	NAY	HAO1	120.0	120.3
CAV	CAO	NAY	HAO2	240.4	239.8
CAL	CAM	NAY	CAO	61.4	71.1
CAM	NAY	CAO	CAN	126.0	123.7
CAO	NAY	CAM	HAM1	301.5	311.3
CAO	NAY	CAM	HAM2	180.1	190.8
CAO	NAY	CAN	CAS	125.5	294.0
CAO	NAY	CAN	HAN1	245.5	53.9
CAO	NAY	CAN	HAN2	8.8	174.0
HAO1	CAO	NAY	HAO2	120.4	119.5
CAJ	CAU	CAL	CAV	179.6	179.7
CAL	CAU	CAJ	HAJ	359.2	0.5
CAU	CAL	CAM	NAY	328.2	309.7
CAM	CAL	CAU	HAL1	240.0	239.9
CAM	CAL	CAU	HAL2	118.3	120.2
CAU	CAL	CAM	HAM1	88.2	69.3
CAU	CAL	CAM	HAM2	209.6	189.9
HAL1	CAL	CAU	HAL2	238.3	240.2
CAO	NAY	CAM	CAL	61.4	71.1
CAU	CAL	CAM	HAL1	120.0	120.1
CAU	CAL	CAM	HAL2	241.7	239.9
CAL	CAM	NAY	CAN	182.3	194.8
NAY	CAM	CAL	HAM1	240.0	240.4
NAY	CAM	CAL	HAM2	118.6	119.7
HAL1	CAL	CAM	HAL2	121.7	119.8
HAM1	CAM	CAL	HAM2	238.6	239.3
CAO	NAY	CAM	CAN	239.1	236.3
CAM	NAY	CAO	HAO1	182.4	187.4
CAM	NAY	CAO	HAO2	62.0	67.9
NAY	CAM	CAL	HAL1	208.2	189.6
NAY	CAM	CAL	HAL2	86.5	69.8
CAL	CAM	NAY	HAM1	120.0	119.7
CAL	CAM	NAY	HAM2	241.4	240.3
CAM	NAY	CAN	CAS	2.1	170.6
CAM	NAY	CAN	HAN1	122.1	290.6
CAM	NAY	CAN	HAN2	245.5	50.6
HAM1	CAM	NAY	HAM2	121.4	120.5
CAO	NAY	CAN	CAM	123.4	123.4
CAN	NAY	CAO	HAO1	56.4	63.7
CAN	NAY	CAO	HAO2	296.0	304.2
CAN	NAY	CAM	HAM1	62.3	75.0
CAN	NAY	CAM	HAM2	300.9	314.5
NAY	CAN	CAS	CAI	78.5	89.9
NAY	CAN	CAS	CAG	257.0	269.7
CAS	CAN	NAY	HAN1	240.0	240.1
CAS	CAN	NAY	HAN2	116.6	120.0
HAN1	CAN	NAY	HAN2	236.7	239.9
NAY	CAN	CAS	HAN1	120.0	120.0
NAY	CAN	CAS	HAN2	243.3	239.9
CAI	CAS	CAN	CAG	181.5	180.3
CAN	CAS	CAI	CAT	179.5	180.0
CAN	CAS	CAI	HAI	359.4	0.0
CAN	CAS	CAG	CAF	180.4	180.0
CAN	CAS	CAG	HAG	0.4	0.0
HAN1	CAN	CAS	HAN2	123.3	120.0
CAN	CAS	CAI	CAG	178.4	179.7
CAI	CAS	CAN	HAN1	318.5	330.0
CAI	CAS	CAN	HAN2	195.2	210.0
CAI	CAS	CAG	CAF	358.9	359.7
CAI	CAS	CAG	HAG	178.9	179.8
CAS	CAI	CAT	CAH	359.5	0.0
CAS	CAI	CAT	OAP	179.7	180.0
CAT	CAI	CAS	HAI	180.0	180.0
CAN	CAS	CAG	CAI	181.6	180.3
CAG	CAS	CAN	HAN1	137.0	149.7
CAG	CAS	CAN	HAN2	13.6	29.7
CAG	CAS	CAI	CAT	1.0	0.3
CAG	CAS	CAI	HAI	181.0	180.3
CAS	CAG	CAF	CAH	0.7	0.0
CAF	CAG	CAS	HAG	180.0	179.9
CAS	CAG	CAF	HAF	180.7	180.0
CAT	CAI	CAS	CAG	1.0	0.3
CAS	CAI	CAT	HAI	180.0	180.0
CAF	CAH	CAT	CAI	0.1	359.7
CAH	CAT	CAI	OAP	179.8	180.1
CAI	CAT	CAH	HAH	180.1	180.0
CAI	CAT	OAP	CAA	1.7	180.0
CAS	CAG	CAF	HAG	180.0	180.1
CAG	CAF	CAH	CAT	359.8	0.3
CAH	CAF	CAG	HAF	180.0	180.0
CAG	CAF	CAH	HAH	179.7	179.9
CAI	CAT	CAH	CAF	0.1	359.7
CAH	CAF	CAG	HAG	180.7	180.0
CAG	CAF	CAH	HAF	180.0	180.0
CAF	CAH	CAT	OAP	179.9	179.8
CAT	CAH	CAF	HAH	180.0	180.3
CAI	CAT	CAH	OAP	180.2	179.9
CAH	CAT	CAI	HAI	179.5	180.0
CAT	CAH	CAF	HAF	179.8	180.3
CAF	CAH	CAT	HAH	180.0	179.7
CAH	CAT	OAP	CAA	181.8	359.9
CAI	CAT	OAP	CAH	179.8	180.1
OAP	CAT	CAI	HAI	359.7	360.0
OAP	CAT	CAH	HAH	360.0	0.1
CAT	OAP	CAA	HAA1	223.3	180.0
CAT	OAP	CAA	HAA2	343.3	300.0
CAT	OAP	CAA	HAA3	103.2	60.1
HAA1	CAA	OAP	HAA2	240.0	240.0
HAA1	CAA	OAP	HAA3	120.0	119.9
HAA2	CAA	OAP	HAA3	240.0	239.9
HAC1	NAC	SAZ	OAR	308.9	240.0
SAZ	NAC	HAC1	HAC2	120.0	180.0
HAC2	NAC	SAZ	OAR	68.9	60.0
SAZ	NAC	HAC2	HAC1	240.0	180.0
HAJ	CAJ	CAX	CAW	181.5	180.2
CAX	CAJ	HAJ	CAU	180.0	180.0
HAJ	CAJ	CAU	CAV	178.8	180.2
HAJ	CAJ	CAU	CAL	359.2	0.5
CAW	CAK	HAK	CAV	180.0	180.0
HAK	CAK	CAV	CAO	359.9	0.2
HAK	CAK	CAV	CAU	180.2	180.4
OAQ	CAB	HAB1	HAB2	120.0	120.0
OAQ	CAB	HAB1	HAB3	240.0	240.1
HAB2	CAB	HAB1	HAB3	120.0	120.0
OAQ	CAB	HAB2	HAB1	240.0	240.0
OAQ	CAB	HAB2	HAB3	120.0	120.0
HAB1	CAB	HAB2	HAB3	240.0	240.0
OAQ	CAB	HAB3	HAB1	120.0	119.9
OAQ	CAB	HAB3	HAB2	240.0	240.0
HAB1	CAB	HAB3	HAB2	120.0	120.0
HAO1	CAO	CAV	CAU	147.4	137.7
CAV	CAO	HAO1	NAY	239.4	239.0
CAV	CAO	HAO1	HAO2	119.7	119.5
HAO1	CAO	NAY	CAM	182.4	187.4
HAO1	CAO	NAY	CAN	56.4	63.7
NAY	CAO	HAO1	HAO2	240.3	240.5
HAO2	CAO	CAV	CAU	267.8	257.2
CAV	CAO	HAO2	NAY	120.4	121.0
CAV	CAO	HAO2	HAO1	240.2	240.5
HAO2	CAO	NAY	CAM	62.0	67.9
HAO2	CAO	NAY	CAN	296.0	304.2
NAY	CAO	HAO2	HAO1	119.8	119.5
CAU	CAL	HAL1	CAM	236.8	239.6
CAU	CAL	HAL1	HAL2	118.4	119.8
HAL1	CAL	CAM	NAY	208.2	189.6
CAM	CAL	HAL1	HAL2	241.6	240.2
HAL1	CAL	CAM	HAM1	328.2	309.2
HAL1	CAL	CAM	HAM2	89.6	69.8
CAU	CAL	HAL2	CAM	122.1	120.5
CAU	CAL	HAL2	HAL1	241.1	240.2
HAL2	CAL	CAM	NAY	86.5	69.8
CAM	CAL	HAL2	HAL1	119.0	119.8
HAL2	CAL	CAM	HAM1	206.5	189.4
HAL2	CAL	CAM	HAM2	327.9	310.1
CAL	CAM	HAM1	NAY	237.4	241.0
HAM1	CAM	CAL	HAL1	328.2	309.2
HAM1	CAM	CAL	HAL2	206.5	189.4
CAL	CAM	HAM1	HAM2	118.7	120.5
HAM1	CAM	NAY	CAN	62.3	75.0
NAY	CAM	HAM1	HAM2	241.3	239.6
CAL	CAM	HAM2	NAY	121.8	119.1
HAM2	CAM	CAL	HAL1	89.6	69.8
HAM2	CAM	CAL	HAL2	327.9	310.1
CAL	CAM	HAM2	HAM1	240.9	239.4
HAM2	CAM	NAY	CAN	300.9	314.5
NAY	CAM	HAM2	HAM1	119.1	120.3
NAY	CAN	HAN1	CAS	234.0	240.0
NAY	CAN	HAN1	HAN2	117.0	120.1
HAN1	CAN	CAS	CAI	318.5	330.0
HAN1	CAN	CAS	CAG	137.0	149.7
CAS	CAN	HAN1	HAN2	243.0	240.1
NAY	CAN	HAN2	CAS	124.1	120.0
NAY	CAN	HAN2	HAN1	242.0	240.0
HAN2	CAN	CAS	CAI	195.2	210.0
HAN2	CAN	CAS	CAG	13.6	29.7
CAS	CAN	HAN2	HAN1	117.9	119.9
HAI	CAI	CAS	CAG	181.0	180.3
CAS	CAI	HAI	CAT	180.0	180.0
HAI	CAI	CAT	CAH	179.5	180.0
HAI	CAI	CAT	OAP	359.7	360.0
CAS	CAG	HAG	CAF	180.0	179.9
HAG	CAG	CAF	CAH	180.7	180.0
HAG	CAG	CAF	HAF	0.7	359.9
CAG	CAF	HAF	CAH	180.0	180.0
HAF	CAF	CAG	HAG	0.7	359.9
HAF	CAF	CAH	CAT	179.8	180.3
HAF	CAF	CAH	HAH	359.8	360.0
CAF	CAH	HAH	CAT	180.0	180.3
HAH	CAH	CAF	HAF	359.8	360.0
HAH	CAH	CAT	OAP	360.0	0.1
OAP	CAA	HAA1	HAA2	120.0	120.0
OAP	CAA	HAA1	HAA3	240.0	240.0
HAA2	CAA	HAA1	HAA3	120.0	120.0
OAP	CAA	HAA2	HAA1	240.0	240.0
OAP	CAA	HAA2	HAA3	120.0	120.1
HAA1	CAA	HAA2	HAA3	240.0	240.1
OAP	CAA	HAA3	HAA1	120.0	119.9
OAP	CAA	HAA3	HAA2	240.0	239.9
HAA1	CAA	HAA3	HAA2	120.0	120.0