PDB Chemical Component MRU

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MRU

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O3P P1 1.510 1.501
P1 O1P 1.510 1.618
P1 O2P 1.510 1.616
P1 O1 1.610 1.621
O1P HO1P 0.950 0.982
O2P HO2P 0.950 0.980
O1 C1 1.426 1.413
C1 C2 1.510 1.517
C1 H11 1.100 1.093
C1 H12 1.100 1.093
C2 C3 1.500 1.530
C2 O2 1.220 1.232
C3 O3 1.431 1.422
C3 C4 1.523 1.536
C3 H3 1.100 1.096
O3 HO3 0.950 0.971
C4 O4 1.432 1.429
C4 C5 1.524 1.535
C4 H4 1.100 1.098
O4 HO4 0.950 0.968
C5 S1 1.761 1.823
C5 H51 1.100 1.094
C5 H52 1.100 1.095
S1 C6 1.762 1.806
C6 H61 1.100 1.092
C6 H62 1.100 1.093
C6 H63 1.100 1.093

Bond Angles for MRU

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O3P P1 O1P 114.4 115.3
O3P P1 O2P 114.4 115.0
O3P P1 O1 103.9 114.9
O1P P1 O2P 114.4 103.3
O1P P1 O1 103.9 103.7
P1 O1P HO1P 109.5 118.9
O2P P1 O1 104.0 103.0
P1 O2P HO2P 109.5 118.9
P1 O1 C1 120.5 118.6
O1 C1 C2 109.5 110.4
O1 C1 H11 109.5 108.7
O1 C1 H12 109.5 108.3
C2 C1 H11 109.5 110.2
C2 C1 H12 109.5 109.3
C1 C2 C3 119.7 117.0
C1 C2 O2 120.2 121.1
H11 C1 H12 109.5 110.0
O2 C2 C3 120.2 121.8
C2 C3 O3 109.5 106.5
C2 C3 C4 109.4 112.1
C2 C3 H3 109.5 107.3
O3 C3 C4 109.5 110.7
O3 C3 H3 109.4 107.9
C3 O3 HO3 109.5 106.7
C4 C3 H3 109.5 112.0
C3 C4 O4 109.5 108.7
C3 C4 C5 111.0 115.7
C3 C4 H4 108.4 108.9
O4 C4 C5 109.5 109.1
O4 C4 H4 110.0 106.7
C4 O4 HO4 109.5 106.4
C5 C4 H4 108.4 107.5
C4 C5 S1 109.5 113.7
C4 C5 H51 109.5 110.6
C4 C5 H52 109.4 109.8
S1 C5 H51 109.4 108.1
S1 C5 H52 109.4 106.7
C5 S1 C6 109.5 98.1
H51 C5 H52 109.5 107.7
S1 C6 H61 109.5 109.9
S1 C6 H62 109.5 109.8
S1 C6 H63 109.4 109.9
H61 C6 H62 109.5 109.0
H61 C6 H63 109.5 109.1
H62 C6 H63 109.5 109.1

Torsion Angles for MRU

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O1P P1 O3P O2P 225.3 239.9
O1P P1 O3P O1 112.6 120.5
O3P P1 O1P HO1P 256.6 48.8
O2P P1 O3P O1 247.3 240.6
O3P P1 O2P HO2P 289.5 312.0
O3P P1 O1 C1 224.9 180.0
O3P P1 O1P O2P 134.7 126.3
O3P P1 O1P O1 247.4 233.5
O2P P1 O1P O1 112.7 107.2
O1P P1 O2P HO2P 64.1 78.5
O1P P1 O1 C1 105.0 53.3
O3P P1 O2P O1P 225.3 233.5
O3P P1 O2P O1 112.7 125.8
O1P P1 O2P O1 247.3 252.3
O2P P1 O1P HO1P 121.9 282.5
O2P P1 O1 C1 345.0 305.9
O3P P1 O1 O1P 120.0 126.7
O3P P1 O1 O2P 240.0 234.1
O1P P1 O1 O2P 120.0 107.4
O1 P1 O1P HO1P 9.2 175.3
O1 P1 O2P HO2P 176.8 186.2
P1 O1 C1 C2 153.6 180.0
P1 O1 C1 H11 273.6 301.0
P1 O1 C1 H12 33.5 60.4
HO1P O1P P1 O2P 121.9 282.5
HO1P O1P P1 O1 9.2 175.3
HO2P O2P P1 O1 176.8 186.2
C2 C1 O1 H11 240.0 239.0
C2 C1 O1 H12 120.0 119.6
O1 C1 C2 C3 260.5 180.1
O1 C1 C2 O2 80.5 359.1
H11 C1 O1 H12 240.0 240.6
O1 C1 C2 H11 120.0 120.1
O1 C1 C2 H12 240.0 241.0
H11 C1 C2 H12 120.0 120.9
O2 C2 C1 C3 180.0 179.0
C1 C2 C3 O3 259.5 184.6
C1 C2 C3 C4 139.5 63.3
C1 C2 C3 H3 19.4 300.0
O1 C1 H11 C2 240.0 238.9
O1 C1 H11 H12 120.0 118.4
C2 C1 H11 H12 240.0 239.5
H11 C1 C2 C3 140.5 60.0
H11 C1 C2 O2 320.5 239.0
O1 C1 H12 C2 120.0 120.3
O1 C1 H12 H11 240.0 241.4
C2 C1 H12 H11 120.0 121.1
H12 C1 C2 C3 20.5 299.0
H12 C1 C2 O2 200.5 118.1
C3 C2 C1 H11 140.5 60.0
C3 C2 C1 H12 20.5 299.0
C1 C2 C3 O2 180.0 179.0
O3 C3 C2 C4 120.0 121.2
O3 C3 C2 H3 240.0 244.6
C2 C3 O3 HO3 109.5 356.8
C4 C3 C2 H3 120.0 123.4
C2 C3 C4 O4 284.3 184.1
C2 C3 C4 C5 163.3 61.1
C2 C3 C4 H4 44.3 300.0
O2 C2 C1 H11 320.5 239.0
O2 C2 C1 H12 200.5 118.1
C1 C2 O2 C3 180.0 181.0
O2 C2 C3 O3 79.5 5.5
O2 C2 C3 C4 319.5 244.3
O2 C2 C3 H3 199.4 120.9
C2 C3 O3 C4 240.0 237.8
C2 C3 O3 H3 120.0 115.0
C4 C3 O3 H3 240.0 237.2
O3 C3 C4 O4 164.3 65.2
O3 C3 C4 C5 43.3 302.2
O3 C3 C4 H4 284.3 181.1
C2 C3 C4 O3 120.0 118.8
C2 C3 C4 H3 240.0 239.3
O3 C3 C4 H3 120.0 120.4
C4 C3 O3 HO3 229.5 119.0
O4 C4 C3 C5 121.0 123.0
O4 C4 C3 H4 240.0 244.1
C3 C4 O4 HO4 10.5 103.9
C5 C4 C3 H4 119.0 121.1
C3 C4 C5 S1 63.6 178.1
C3 C4 C5 H51 183.6 299.9
C3 C4 C5 H52 303.6 58.6
C2 C3 H3 O3 240.0 245.5
C2 C3 H3 C4 120.0 123.5
O3 C3 H3 C4 240.0 238.0
H3 C3 O3 HO3 349.5 241.8
H3 C3 C4 O4 44.3 304.8
H3 C3 C4 C5 283.3 181.8
H3 C3 C4 H4 164.4 60.7
HO3 O3 C3 C4 229.5 119.0
HO3 O3 C3 H3 349.5 241.8
O4 C4 C3 H3 44.3 304.8
C3 C4 O4 C5 238.1 233.1
C3 C4 O4 H4 119.1 117.3
C5 C4 O4 H4 241.0 244.2
O4 C4 C5 S1 302.6 55.3
O4 C4 C5 H51 62.6 177.1
O4 C4 C5 H52 182.6 295.8
C5 C4 C3 H3 283.3 181.8
C3 C4 C5 O4 121.0 122.8
C3 C4 C5 H4 241.0 238.1
O4 C4 C5 H4 120.0 115.3
C5 C4 O4 HO4 132.4 230.8
S1 C5 C4 H51 240.0 238.2
S1 C5 C4 H52 120.0 119.5
C4 C5 S1 C6 145.2 63.3
H51 C5 C4 H52 240.0 241.3
H4 C4 C3 H3 164.4 60.7
C3 C4 H4 O4 240.3 242.9
C3 C4 H4 C5 120.6 126.0
O4 C4 H4 C5 240.3 243.1
H4 C4 O4 HO4 251.4 346.6
H4 C4 C5 S1 182.6 300.0
H4 C4 C5 H51 302.6 61.8
H4 C4 C5 H52 62.6 180.5
HO4 O4 C4 C5 132.4 230.8
HO4 O4 C4 H4 251.4 346.6
S1 C5 C4 H4 182.6 300.0
C4 C5 S1 H51 120.0 123.2
C4 C5 S1 H52 240.0 238.8
H51 C5 S1 H52 120.0 115.6
C5 S1 C6 H61 210.3 28.1
C5 S1 C6 H62 330.4 268.1
C5 S1 C6 H63 90.4 148.1
H51 C5 C4 H4 302.6 61.8
C4 C5 H51 S1 240.0 234.9
C4 C5 H51 H52 120.0 120.0
S1 C5 H51 H52 240.0 245.1
H51 C5 S1 C6 25.2 300.0
H52 C5 C4 H4 62.6 180.5
C4 C5 H52 S1 120.0 123.7
C4 C5 H52 H51 240.0 239.5
S1 C5 H52 H51 120.0 115.9
H52 C5 S1 C6 265.2 184.5
C6 S1 C5 H51 25.2 300.0
C6 S1 C5 H52 265.2 184.5
H61 C6 S1 H62 240.0 120.0
H61 C6 S1 H63 120.0 240.0
H62 C6 S1 H63 240.0 120.0
S1 C6 H61 H62 120.0 239.6
S1 C6 H61 H63 240.0 120.5
H62 C6 H61 H63 120.0 241.0
S1 C6 H62 H61 240.0 120.5
S1 C6 H62 H63 120.0 239.5
H61 C6 H62 H63 240.0 119.0
S1 C6 H63 H61 120.0 239.4
S1 C6 H63 H62 240.0 120.4
H61 C6 H63 H62 120.0 241.0