PDB Chemical Component MRU
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MRU
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O3P |
P1 |
1.510 |
1.501 |
P1 |
O1P |
1.510 |
1.618 |
P1 |
O2P |
1.510 |
1.616 |
P1 |
O1 |
1.610 |
1.621 |
O1P |
HO1P |
0.950 |
0.982 |
O2P |
HO2P |
0.950 |
0.980 |
O1 |
C1 |
1.426 |
1.413 |
C1 |
C2 |
1.510 |
1.517 |
C1 |
H11 |
1.100 |
1.093 |
C1 |
H12 |
1.100 |
1.093 |
C2 |
C3 |
1.500 |
1.530 |
C2 |
O2 |
1.220 |
1.232 |
C3 |
O3 |
1.431 |
1.422 |
C3 |
C4 |
1.523 |
1.536 |
C3 |
H3 |
1.100 |
1.096 |
O3 |
HO3 |
0.950 |
0.971 |
C4 |
O4 |
1.432 |
1.429 |
C4 |
C5 |
1.524 |
1.535 |
C4 |
H4 |
1.100 |
1.098 |
O4 |
HO4 |
0.950 |
0.968 |
C5 |
S1 |
1.761 |
1.823 |
C5 |
H51 |
1.100 |
1.094 |
C5 |
H52 |
1.100 |
1.095 |
S1 |
C6 |
1.762 |
1.806 |
C6 |
H61 |
1.100 |
1.092 |
C6 |
H62 |
1.100 |
1.093 |
C6 |
H63 |
1.100 |
1.093 |
Bond Angles for MRU
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O3P |
P1 |
O1P |
114.4 |
115.3 |
O3P |
P1 |
O2P |
114.4 |
115.0 |
O3P |
P1 |
O1 |
103.9 |
114.9 |
O1P |
P1 |
O2P |
114.4 |
103.3 |
O1P |
P1 |
O1 |
103.9 |
103.7 |
P1 |
O1P |
HO1P |
109.5 |
118.9 |
O2P |
P1 |
O1 |
104.0 |
103.0 |
P1 |
O2P |
HO2P |
109.5 |
118.9 |
P1 |
O1 |
C1 |
120.5 |
118.6 |
O1 |
C1 |
C2 |
109.5 |
110.4 |
O1 |
C1 |
H11 |
109.5 |
108.7 |
O1 |
C1 |
H12 |
109.5 |
108.3 |
C2 |
C1 |
H11 |
109.5 |
110.2 |
C2 |
C1 |
H12 |
109.5 |
109.3 |
C1 |
C2 |
C3 |
119.7 |
117.0 |
C1 |
C2 |
O2 |
120.2 |
121.1 |
H11 |
C1 |
H12 |
109.5 |
110.0 |
O2 |
C2 |
C3 |
120.2 |
121.8 |
C2 |
C3 |
O3 |
109.5 |
106.5 |
C2 |
C3 |
C4 |
109.4 |
112.1 |
C2 |
C3 |
H3 |
109.5 |
107.3 |
O3 |
C3 |
C4 |
109.5 |
110.7 |
O3 |
C3 |
H3 |
109.4 |
107.9 |
C3 |
O3 |
HO3 |
109.5 |
106.7 |
C4 |
C3 |
H3 |
109.5 |
112.0 |
C3 |
C4 |
O4 |
109.5 |
108.7 |
C3 |
C4 |
C5 |
111.0 |
115.7 |
C3 |
C4 |
H4 |
108.4 |
108.9 |
O4 |
C4 |
C5 |
109.5 |
109.1 |
O4 |
C4 |
H4 |
110.0 |
106.7 |
C4 |
O4 |
HO4 |
109.5 |
106.4 |
C5 |
C4 |
H4 |
108.4 |
107.5 |
C4 |
C5 |
S1 |
109.5 |
113.7 |
C4 |
C5 |
H51 |
109.5 |
110.6 |
C4 |
C5 |
H52 |
109.4 |
109.8 |
S1 |
C5 |
H51 |
109.4 |
108.1 |
S1 |
C5 |
H52 |
109.4 |
106.7 |
C5 |
S1 |
C6 |
109.5 |
98.1 |
H51 |
C5 |
H52 |
109.5 |
107.7 |
S1 |
C6 |
H61 |
109.5 |
109.9 |
S1 |
C6 |
H62 |
109.5 |
109.8 |
S1 |
C6 |
H63 |
109.4 |
109.9 |
H61 |
C6 |
H62 |
109.5 |
109.0 |
H61 |
C6 |
H63 |
109.5 |
109.1 |
H62 |
C6 |
H63 |
109.5 |
109.1 |
Torsion Angles for MRU
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1P |
P1 |
O3P |
O2P |
225.3 |
239.9 |
O1P |
P1 |
O3P |
O1 |
112.6 |
120.5 |
O3P |
P1 |
O1P |
HO1P |
256.6 |
48.8 |
O2P |
P1 |
O3P |
O1 |
247.3 |
240.6 |
O3P |
P1 |
O2P |
HO2P |
289.5 |
312.0 |
O3P |
P1 |
O1 |
C1 |
224.9 |
180.0 |
O3P |
P1 |
O1P |
O2P |
134.7 |
126.3 |
O3P |
P1 |
O1P |
O1 |
247.4 |
233.5 |
O2P |
P1 |
O1P |
O1 |
112.7 |
107.2 |
O1P |
P1 |
O2P |
HO2P |
64.1 |
78.5 |
O1P |
P1 |
O1 |
C1 |
105.0 |
53.3 |
O3P |
P1 |
O2P |
O1P |
225.3 |
233.5 |
O3P |
P1 |
O2P |
O1 |
112.7 |
125.8 |
O1P |
P1 |
O2P |
O1 |
247.3 |
252.3 |
O2P |
P1 |
O1P |
HO1P |
121.9 |
282.5 |
O2P |
P1 |
O1 |
C1 |
345.0 |
305.9 |
O3P |
P1 |
O1 |
O1P |
120.0 |
126.7 |
O3P |
P1 |
O1 |
O2P |
240.0 |
234.1 |
O1P |
P1 |
O1 |
O2P |
120.0 |
107.4 |
O1 |
P1 |
O1P |
HO1P |
9.2 |
175.3 |
O1 |
P1 |
O2P |
HO2P |
176.8 |
186.2 |
P1 |
O1 |
C1 |
C2 |
153.6 |
180.0 |
P1 |
O1 |
C1 |
H11 |
273.6 |
301.0 |
P1 |
O1 |
C1 |
H12 |
33.5 |
60.4 |
HO1P |
O1P |
P1 |
O2P |
121.9 |
282.5 |
HO1P |
O1P |
P1 |
O1 |
9.2 |
175.3 |
HO2P |
O2P |
P1 |
O1 |
176.8 |
186.2 |
C2 |
C1 |
O1 |
H11 |
240.0 |
239.0 |
C2 |
C1 |
O1 |
H12 |
120.0 |
119.6 |
O1 |
C1 |
C2 |
C3 |
260.5 |
180.1 |
O1 |
C1 |
C2 |
O2 |
80.5 |
359.1 |
H11 |
C1 |
O1 |
H12 |
240.0 |
240.6 |
O1 |
C1 |
C2 |
H11 |
120.0 |
120.1 |
O1 |
C1 |
C2 |
H12 |
240.0 |
241.0 |
H11 |
C1 |
C2 |
H12 |
120.0 |
120.9 |
O2 |
C2 |
C1 |
C3 |
180.0 |
179.0 |
C1 |
C2 |
C3 |
O3 |
259.5 |
184.6 |
C1 |
C2 |
C3 |
C4 |
139.5 |
63.3 |
C1 |
C2 |
C3 |
H3 |
19.4 |
300.0 |
O1 |
C1 |
H11 |
C2 |
240.0 |
238.9 |
O1 |
C1 |
H11 |
H12 |
120.0 |
118.4 |
C2 |
C1 |
H11 |
H12 |
240.0 |
239.5 |
H11 |
C1 |
C2 |
C3 |
140.5 |
60.0 |
H11 |
C1 |
C2 |
O2 |
320.5 |
239.0 |
O1 |
C1 |
H12 |
C2 |
120.0 |
120.3 |
O1 |
C1 |
H12 |
H11 |
240.0 |
241.4 |
C2 |
C1 |
H12 |
H11 |
120.0 |
121.1 |
H12 |
C1 |
C2 |
C3 |
20.5 |
299.0 |
H12 |
C1 |
C2 |
O2 |
200.5 |
118.1 |
C3 |
C2 |
C1 |
H11 |
140.5 |
60.0 |
C3 |
C2 |
C1 |
H12 |
20.5 |
299.0 |
C1 |
C2 |
C3 |
O2 |
180.0 |
179.0 |
O3 |
C3 |
C2 |
C4 |
120.0 |
121.2 |
O3 |
C3 |
C2 |
H3 |
240.0 |
244.6 |
C2 |
C3 |
O3 |
HO3 |
109.5 |
356.8 |
C4 |
C3 |
C2 |
H3 |
120.0 |
123.4 |
C2 |
C3 |
C4 |
O4 |
284.3 |
184.1 |
C2 |
C3 |
C4 |
C5 |
163.3 |
61.1 |
C2 |
C3 |
C4 |
H4 |
44.3 |
300.0 |
O2 |
C2 |
C1 |
H11 |
320.5 |
239.0 |
O2 |
C2 |
C1 |
H12 |
200.5 |
118.1 |
C1 |
C2 |
O2 |
C3 |
180.0 |
181.0 |
O2 |
C2 |
C3 |
O3 |
79.5 |
5.5 |
O2 |
C2 |
C3 |
C4 |
319.5 |
244.3 |
O2 |
C2 |
C3 |
H3 |
199.4 |
120.9 |
C2 |
C3 |
O3 |
C4 |
240.0 |
237.8 |
C2 |
C3 |
O3 |
H3 |
120.0 |
115.0 |
C4 |
C3 |
O3 |
H3 |
240.0 |
237.2 |
O3 |
C3 |
C4 |
O4 |
164.3 |
65.2 |
O3 |
C3 |
C4 |
C5 |
43.3 |
302.2 |
O3 |
C3 |
C4 |
H4 |
284.3 |
181.1 |
C2 |
C3 |
C4 |
O3 |
120.0 |
118.8 |
C2 |
C3 |
C4 |
H3 |
240.0 |
239.3 |
O3 |
C3 |
C4 |
H3 |
120.0 |
120.4 |
C4 |
C3 |
O3 |
HO3 |
229.5 |
119.0 |
O4 |
C4 |
C3 |
C5 |
121.0 |
123.0 |
O4 |
C4 |
C3 |
H4 |
240.0 |
244.1 |
C3 |
C4 |
O4 |
HO4 |
10.5 |
103.9 |
C5 |
C4 |
C3 |
H4 |
119.0 |
121.1 |
C3 |
C4 |
C5 |
S1 |
63.6 |
178.1 |
C3 |
C4 |
C5 |
H51 |
183.6 |
299.9 |
C3 |
C4 |
C5 |
H52 |
303.6 |
58.6 |
C2 |
C3 |
H3 |
O3 |
240.0 |
245.5 |
C2 |
C3 |
H3 |
C4 |
120.0 |
123.5 |
O3 |
C3 |
H3 |
C4 |
240.0 |
238.0 |
H3 |
C3 |
O3 |
HO3 |
349.5 |
241.8 |
H3 |
C3 |
C4 |
O4 |
44.3 |
304.8 |
H3 |
C3 |
C4 |
C5 |
283.3 |
181.8 |
H3 |
C3 |
C4 |
H4 |
164.4 |
60.7 |
HO3 |
O3 |
C3 |
C4 |
229.5 |
119.0 |
HO3 |
O3 |
C3 |
H3 |
349.5 |
241.8 |
O4 |
C4 |
C3 |
H3 |
44.3 |
304.8 |
C3 |
C4 |
O4 |
C5 |
238.1 |
233.1 |
C3 |
C4 |
O4 |
H4 |
119.1 |
117.3 |
C5 |
C4 |
O4 |
H4 |
241.0 |
244.2 |
O4 |
C4 |
C5 |
S1 |
302.6 |
55.3 |
O4 |
C4 |
C5 |
H51 |
62.6 |
177.1 |
O4 |
C4 |
C5 |
H52 |
182.6 |
295.8 |
C5 |
C4 |
C3 |
H3 |
283.3 |
181.8 |
C3 |
C4 |
C5 |
O4 |
121.0 |
122.8 |
C3 |
C4 |
C5 |
H4 |
241.0 |
238.1 |
O4 |
C4 |
C5 |
H4 |
120.0 |
115.3 |
C5 |
C4 |
O4 |
HO4 |
132.4 |
230.8 |
S1 |
C5 |
C4 |
H51 |
240.0 |
238.2 |
S1 |
C5 |
C4 |
H52 |
120.0 |
119.5 |
C4 |
C5 |
S1 |
C6 |
145.2 |
63.3 |
H51 |
C5 |
C4 |
H52 |
240.0 |
241.3 |
H4 |
C4 |
C3 |
H3 |
164.4 |
60.7 |
C3 |
C4 |
H4 |
O4 |
240.3 |
242.9 |
C3 |
C4 |
H4 |
C5 |
120.6 |
126.0 |
O4 |
C4 |
H4 |
C5 |
240.3 |
243.1 |
H4 |
C4 |
O4 |
HO4 |
251.4 |
346.6 |
H4 |
C4 |
C5 |
S1 |
182.6 |
300.0 |
H4 |
C4 |
C5 |
H51 |
302.6 |
61.8 |
H4 |
C4 |
C5 |
H52 |
62.6 |
180.5 |
HO4 |
O4 |
C4 |
C5 |
132.4 |
230.8 |
HO4 |
O4 |
C4 |
H4 |
251.4 |
346.6 |
S1 |
C5 |
C4 |
H4 |
182.6 |
300.0 |
C4 |
C5 |
S1 |
H51 |
120.0 |
123.2 |
C4 |
C5 |
S1 |
H52 |
240.0 |
238.8 |
H51 |
C5 |
S1 |
H52 |
120.0 |
115.6 |
C5 |
S1 |
C6 |
H61 |
210.3 |
28.1 |
C5 |
S1 |
C6 |
H62 |
330.4 |
268.1 |
C5 |
S1 |
C6 |
H63 |
90.4 |
148.1 |
H51 |
C5 |
C4 |
H4 |
302.6 |
61.8 |
C4 |
C5 |
H51 |
S1 |
240.0 |
234.9 |
C4 |
C5 |
H51 |
H52 |
120.0 |
120.0 |
S1 |
C5 |
H51 |
H52 |
240.0 |
245.1 |
H51 |
C5 |
S1 |
C6 |
25.2 |
300.0 |
H52 |
C5 |
C4 |
H4 |
62.6 |
180.5 |
C4 |
C5 |
H52 |
S1 |
120.0 |
123.7 |
C4 |
C5 |
H52 |
H51 |
240.0 |
239.5 |
S1 |
C5 |
H52 |
H51 |
120.0 |
115.9 |
H52 |
C5 |
S1 |
C6 |
265.2 |
184.5 |
C6 |
S1 |
C5 |
H51 |
25.2 |
300.0 |
C6 |
S1 |
C5 |
H52 |
265.2 |
184.5 |
H61 |
C6 |
S1 |
H62 |
240.0 |
120.0 |
H61 |
C6 |
S1 |
H63 |
120.0 |
240.0 |
H62 |
C6 |
S1 |
H63 |
240.0 |
120.0 |
S1 |
C6 |
H61 |
H62 |
120.0 |
239.6 |
S1 |
C6 |
H61 |
H63 |
240.0 |
120.5 |
H62 |
C6 |
H61 |
H63 |
120.0 |
241.0 |
S1 |
C6 |
H62 |
H61 |
240.0 |
120.5 |
S1 |
C6 |
H62 |
H63 |
120.0 |
239.5 |
H61 |
C6 |
H62 |
H63 |
240.0 |
119.0 |
S1 |
C6 |
H63 |
H61 |
120.0 |
239.4 |
S1 |
C6 |
H63 |
H62 |
240.0 |
120.4 |
H61 |
C6 |
H63 |
H62 |
120.0 |
241.0 |