PDB Chemical Component MPV
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MPV
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.375 |
1.359 |
C1 |
C5 |
1.372 |
1.409 |
C2 |
N3 |
1.350 |
1.359 |
C2 |
N12 |
1.359 |
1.393 |
N3 |
N4 |
1.415 |
1.400 |
N3 |
C11 |
1.476 |
1.465 |
N4 |
C5 |
1.348 |
1.318 |
C5 |
C6 |
1.456 |
1.479 |
C6 |
S7 |
1.700 |
1.758 |
C6 |
C10 |
1.389 |
1.348 |
S7 |
C8 |
1.725 |
1.759 |
C8 |
C9 |
1.401 |
1.337 |
C9 |
C10 |
1.386 |
1.380 |
C1 |
H1 |
1.080 |
1.080 |
C8 |
H8 |
1.080 |
1.080 |
C9 |
H9 |
1.080 |
1.080 |
C10 |
H10 |
1.080 |
1.080 |
C11 |
H11 |
1.100 |
1.089 |
C11 |
H11A |
1.100 |
1.091 |
C11 |
H11B |
1.100 |
1.091 |
N12 |
HN12 |
1.000 |
0.970 |
N12 |
HN1A |
1.000 |
0.970 |
Bond Angles for MPV
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C5 |
100.4 |
107.8 |
C1 |
C2 |
N3 |
112.3 |
107.8 |
C1 |
C2 |
N12 |
121.2 |
126.1 |
C2 |
C1 |
H1 |
129.8 |
126.1 |
C1 |
C5 |
N4 |
117.2 |
108.1 |
C1 |
C5 |
C6 |
121.2 |
125.9 |
C5 |
C1 |
H1 |
129.8 |
126.1 |
N3 |
C2 |
N12 |
126.4 |
126.1 |
C2 |
N3 |
N4 |
108.5 |
108.1 |
C2 |
N3 |
C11 |
137.0 |
126.0 |
C2 |
N12 |
HN12 |
109.5 |
120.0 |
C2 |
N12 |
HN1A |
109.4 |
120.0 |
N4 |
N3 |
C11 |
114.5 |
125.9 |
N3 |
N4 |
C5 |
101.5 |
108.3 |
N3 |
C11 |
H11 |
109.5 |
109.5 |
N3 |
C11 |
H11A |
109.5 |
109.5 |
N3 |
C11 |
H11B |
109.5 |
109.4 |
N4 |
C5 |
C6 |
121.4 |
126.0 |
C5 |
C6 |
S7 |
121.7 |
125.3 |
C5 |
C6 |
C10 |
123.0 |
125.2 |
S7 |
C6 |
C10 |
115.0 |
109.5 |
C6 |
S7 |
C8 |
90.3 |
91.0 |
C6 |
C10 |
C9 |
109.3 |
114.7 |
C6 |
C10 |
H10 |
125.4 |
122.6 |
S7 |
C8 |
C9 |
110.7 |
109.7 |
S7 |
C8 |
H8 |
124.7 |
125.2 |
C8 |
C9 |
C10 |
114.5 |
115.0 |
C9 |
C8 |
H8 |
124.6 |
125.1 |
C8 |
C9 |
H9 |
122.8 |
122.4 |
C10 |
C9 |
H9 |
122.7 |
122.5 |
C9 |
C10 |
H10 |
125.3 |
122.6 |
H11 |
C11 |
H11A |
109.4 |
109.5 |
H11 |
C11 |
H11B |
109.5 |
109.5 |
H11A |
C11 |
H11B |
109.5 |
109.5 |
HN12 |
N12 |
HN1A |
109.5 |
120.1 |
Torsion Angles for MPV
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C5 |
N4 |
1.3 |
0.0 |
C2 |
C1 |
C5 |
C6 |
176.4 |
180.0 |
C5 |
C1 |
C2 |
H1 |
180.0 |
180.2 |
N3 |
C2 |
C1 |
N12 |
181.1 |
180.0 |
C1 |
C2 |
N3 |
N4 |
359.1 |
0.0 |
C1 |
C2 |
N3 |
C11 |
180.3 |
180.0 |
C1 |
C2 |
N12 |
HN12 |
180.0 |
360.0 |
C1 |
C2 |
N12 |
HN1A |
300.0 |
180.0 |
C5 |
C1 |
C2 |
N3 |
359.8 |
360.0 |
C5 |
C1 |
C2 |
N12 |
178.7 |
179.9 |
C2 |
C1 |
C5 |
H1 |
180.0 |
179.8 |
N3 |
N4 |
C5 |
C1 |
358.2 |
360.0 |
N4 |
C5 |
C1 |
C6 |
184.9 |
180.1 |
C1 |
C5 |
C6 |
S7 |
182.5 |
0.1 |
C1 |
C5 |
C6 |
C10 |
356.5 |
179.7 |
N3 |
C2 |
C1 |
C5 |
359.8 |
360.0 |
C1 |
C2 |
N3 |
N12 |
178.8 |
180.0 |
N3 |
C2 |
C1 |
H1 |
179.9 |
179.8 |
N3 |
C2 |
N12 |
HN12 |
358.7 |
180.0 |
N3 |
C2 |
N12 |
HN1A |
118.7 |
360.0 |
N4 |
N3 |
C2 |
C11 |
178.8 |
180.0 |
C2 |
N3 |
N4 |
C5 |
1.5 |
0.0 |
C2 |
N3 |
C11 |
H11 |
178.8 |
90.0 |
C2 |
N3 |
C11 |
H11A |
298.8 |
210.0 |
C2 |
N3 |
C11 |
H11B |
58.8 |
330.0 |
N12 |
C2 |
C1 |
C5 |
178.7 |
179.9 |
C1 |
C2 |
N12 |
N3 |
181.3 |
180.0 |
N12 |
C2 |
C1 |
H1 |
358.7 |
359.8 |
N12 |
C2 |
N3 |
N4 |
180.3 |
180.0 |
N12 |
C2 |
N3 |
C11 |
1.5 |
360.0 |
HN12 |
N12 |
C2 |
HN1A |
240.0 |
180.0 |
C1 |
C5 |
N4 |
N3 |
358.2 |
360.0 |
N4 |
N3 |
C2 |
N12 |
180.3 |
180.0 |
C2 |
N3 |
N4 |
C11 |
180.9 |
180.0 |
N4 |
N3 |
C11 |
H11 |
0.0 |
270.0 |
N4 |
N3 |
C11 |
H11A |
120.0 |
30.0 |
N4 |
N3 |
C11 |
H11B |
240.0 |
149.9 |
N3 |
N4 |
C5 |
C6 |
183.1 |
180.1 |
C11 |
N3 |
C2 |
N12 |
1.5 |
360.0 |
C2 |
N3 |
C11 |
N4 |
178.8 |
180.1 |
C11 |
N3 |
N4 |
C5 |
180.6 |
180.0 |
H11 |
C11 |
N3 |
H11A |
240.1 |
240.0 |
H11 |
C11 |
N3 |
H11B |
120.0 |
120.0 |
H11A |
C11 |
N3 |
H11B |
240.0 |
240.0 |
C1 |
C5 |
N4 |
C6 |
175.1 |
179.9 |
N4 |
C5 |
C1 |
H1 |
181.2 |
180.2 |
C5 |
N4 |
N3 |
C11 |
180.6 |
180.0 |
N4 |
C5 |
C6 |
S7 |
357.5 |
180.0 |
N4 |
C5 |
C6 |
C10 |
171.5 |
359.6 |
C1 |
C5 |
C6 |
N4 |
185.1 |
180.1 |
C6 |
C5 |
C1 |
H1 |
356.4 |
0.1 |
S7 |
C6 |
C5 |
C10 |
186.0 |
180.4 |
C5 |
C6 |
S7 |
C8 |
177.8 |
179.9 |
C5 |
C6 |
C10 |
C9 |
183.3 |
179.9 |
C5 |
C6 |
C10 |
H10 |
3.3 |
0.1 |
C5 |
C6 |
S7 |
C10 |
174.5 |
179.7 |
S7 |
C6 |
C10 |
C9 |
357.7 |
359.6 |
S7 |
C6 |
C10 |
H10 |
177.7 |
179.8 |
C6 |
S7 |
C8 |
C9 |
356.7 |
0.0 |
C6 |
S7 |
C8 |
H8 |
176.7 |
180.0 |
C5 |
C6 |
C10 |
S7 |
185.6 |
180.3 |
C10 |
C6 |
S7 |
C8 |
3.3 |
0.2 |
C8 |
C9 |
C10 |
C6 |
359.7 |
0.5 |
C6 |
C10 |
C9 |
H9 |
179.7 |
180.2 |
C9 |
C10 |
C6 |
H10 |
180.0 |
179.8 |
C8 |
S7 |
C6 |
C10 |
3.3 |
0.2 |
S7 |
C8 |
C9 |
C10 |
2.7 |
359.7 |
C9 |
C8 |
S7 |
H8 |
180.0 |
180.0 |
S7 |
C8 |
C9 |
H9 |
182.7 |
180.0 |
C6 |
C10 |
C9 |
C8 |
359.7 |
0.5 |
S7 |
C8 |
C9 |
H8 |
180.0 |
180.0 |
C10 |
C9 |
C8 |
H9 |
180.0 |
179.7 |
C8 |
C9 |
C10 |
H10 |
179.7 |
180.3 |
C6 |
C10 |
C9 |
H10 |
180.0 |
180.2 |
C10 |
C9 |
C8 |
H8 |
182.7 |
179.8 |
C8 |
C9 |
C10 |
H9 |
180.0 |
180.3 |
C2 |
C1 |
H1 |
C5 |
180.0 |
180.2 |
H1 |
C1 |
C2 |
N3 |
179.9 |
179.8 |
H1 |
C1 |
C2 |
N12 |
358.7 |
359.8 |
H1 |
C1 |
C5 |
N4 |
181.2 |
180.2 |
H1 |
C1 |
C5 |
C6 |
356.4 |
0.1 |
S7 |
C8 |
H8 |
C9 |
180.0 |
180.1 |
H8 |
C8 |
C9 |
C10 |
182.7 |
179.8 |
H8 |
C8 |
C9 |
H9 |
2.7 |
0.1 |
C8 |
C9 |
H9 |
C10 |
180.0 |
179.7 |
H9 |
C9 |
C8 |
H8 |
2.7 |
0.1 |
H9 |
C9 |
C10 |
H10 |
359.7 |
360.0 |
C6 |
C10 |
H10 |
C9 |
180.0 |
179.8 |
H10 |
C10 |
C9 |
H9 |
359.7 |
360.0 |
N3 |
C11 |
H11 |
H11A |
120.0 |
120.0 |
N3 |
C11 |
H11 |
H11B |
240.0 |
240.0 |
H11A |
C11 |
H11 |
H11B |
120.0 |
120.0 |
N3 |
C11 |
H11A |
H11 |
240.0 |
240.0 |
N3 |
C11 |
H11A |
H11B |
120.0 |
120.0 |
H11 |
C11 |
H11A |
H11B |
240.0 |
240.0 |
N3 |
C11 |
H11B |
H11 |
120.0 |
120.0 |
N3 |
C11 |
H11B |
H11A |
240.0 |
240.0 |
H11 |
C11 |
H11B |
H11A |
120.0 |
120.0 |
C2 |
N12 |
HN12 |
HN1A |
120.0 |
180.0 |
C2 |
N12 |
HN1A |
HN12 |
239.9 |
180.0 |