PDB Chemical Component MPV

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MPV

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.375 1.359
C1 C5 1.372 1.409
C2 N3 1.350 1.359
C2 N12 1.359 1.393
N3 N4 1.415 1.400
N3 C11 1.476 1.465
N4 C5 1.348 1.318
C5 C6 1.456 1.479
C6 S7 1.700 1.758
C6 C10 1.389 1.348
S7 C8 1.725 1.759
C8 C9 1.401 1.337
C9 C10 1.386 1.380
C1 H1 1.080 1.080
C8 H8 1.080 1.080
C9 H9 1.080 1.080
C10 H10 1.080 1.080
C11 H11 1.100 1.089
C11 H11A 1.100 1.091
C11 H11B 1.100 1.091
N12 HN12 1.000 0.970
N12 HN1A 1.000 0.970

Bond Angles for MPV

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C5 100.4 107.8
C1 C2 N3 112.3 107.8
C1 C2 N12 121.2 126.1
C2 C1 H1 129.8 126.1
C1 C5 N4 117.2 108.1
C1 C5 C6 121.2 125.9
C5 C1 H1 129.8 126.1
N3 C2 N12 126.4 126.1
C2 N3 N4 108.5 108.1
C2 N3 C11 137.0 126.0
C2 N12 HN12 109.5 120.0
C2 N12 HN1A 109.4 120.0
N4 N3 C11 114.5 125.9
N3 N4 C5 101.5 108.3
N3 C11 H11 109.5 109.5
N3 C11 H11A 109.5 109.5
N3 C11 H11B 109.5 109.4
N4 C5 C6 121.4 126.0
C5 C6 S7 121.7 125.3
C5 C6 C10 123.0 125.2
S7 C6 C10 115.0 109.5
C6 S7 C8 90.3 91.0
C6 C10 C9 109.3 114.7
C6 C10 H10 125.4 122.6
S7 C8 C9 110.7 109.7
S7 C8 H8 124.7 125.2
C8 C9 C10 114.5 115.0
C9 C8 H8 124.6 125.1
C8 C9 H9 122.8 122.4
C10 C9 H9 122.7 122.5
C9 C10 H10 125.3 122.6
H11 C11 H11A 109.4 109.5
H11 C11 H11B 109.5 109.5
H11A C11 H11B 109.5 109.5
HN12 N12 HN1A 109.5 120.1

Torsion Angles for MPV

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C5 N4 1.3 0.0
C2 C1 C5 C6 176.4 180.0
C5 C1 C2 H1 180.0 180.2
N3 C2 C1 N12 181.1 180.0
C1 C2 N3 N4 359.1 0.0
C1 C2 N3 C11 180.3 180.0
C1 C2 N12 HN12 180.0 360.0
C1 C2 N12 HN1A 300.0 180.0
C5 C1 C2 N3 359.8 360.0
C5 C1 C2 N12 178.7 179.9
C2 C1 C5 H1 180.0 179.8
N3 N4 C5 C1 358.2 360.0
N4 C5 C1 C6 184.9 180.1
C1 C5 C6 S7 182.5 0.1
C1 C5 C6 C10 356.5 179.7
N3 C2 C1 C5 359.8 360.0
C1 C2 N3 N12 178.8 180.0
N3 C2 C1 H1 179.9 179.8
N3 C2 N12 HN12 358.7 180.0
N3 C2 N12 HN1A 118.7 360.0
N4 N3 C2 C11 178.8 180.0
C2 N3 N4 C5 1.5 0.0
C2 N3 C11 H11 178.8 90.0
C2 N3 C11 H11A 298.8 210.0
C2 N3 C11 H11B 58.8 330.0
N12 C2 C1 C5 178.7 179.9
C1 C2 N12 N3 181.3 180.0
N12 C2 C1 H1 358.7 359.8
N12 C2 N3 N4 180.3 180.0
N12 C2 N3 C11 1.5 360.0
HN12 N12 C2 HN1A 240.0 180.0
C1 C5 N4 N3 358.2 360.0
N4 N3 C2 N12 180.3 180.0
C2 N3 N4 C11 180.9 180.0
N4 N3 C11 H11 0.0 270.0
N4 N3 C11 H11A 120.0 30.0
N4 N3 C11 H11B 240.0 149.9
N3 N4 C5 C6 183.1 180.1
C11 N3 C2 N12 1.5 360.0
C2 N3 C11 N4 178.8 180.1
C11 N3 N4 C5 180.6 180.0
H11 C11 N3 H11A 240.1 240.0
H11 C11 N3 H11B 120.0 120.0
H11A C11 N3 H11B 240.0 240.0
C1 C5 N4 C6 175.1 179.9
N4 C5 C1 H1 181.2 180.2
C5 N4 N3 C11 180.6 180.0
N4 C5 C6 S7 357.5 180.0
N4 C5 C6 C10 171.5 359.6
C1 C5 C6 N4 185.1 180.1
C6 C5 C1 H1 356.4 0.1
S7 C6 C5 C10 186.0 180.4
C5 C6 S7 C8 177.8 179.9
C5 C6 C10 C9 183.3 179.9
C5 C6 C10 H10 3.3 0.1
C5 C6 S7 C10 174.5 179.7
S7 C6 C10 C9 357.7 359.6
S7 C6 C10 H10 177.7 179.8
C6 S7 C8 C9 356.7 0.0
C6 S7 C8 H8 176.7 180.0
C5 C6 C10 S7 185.6 180.3
C10 C6 S7 C8 3.3 0.2
C8 C9 C10 C6 359.7 0.5
C6 C10 C9 H9 179.7 180.2
C9 C10 C6 H10 180.0 179.8
C8 S7 C6 C10 3.3 0.2
S7 C8 C9 C10 2.7 359.7
C9 C8 S7 H8 180.0 180.0
S7 C8 C9 H9 182.7 180.0
C6 C10 C9 C8 359.7 0.5
S7 C8 C9 H8 180.0 180.0
C10 C9 C8 H9 180.0 179.7
C8 C9 C10 H10 179.7 180.3
C6 C10 C9 H10 180.0 180.2
C10 C9 C8 H8 182.7 179.8
C8 C9 C10 H9 180.0 180.3
C2 C1 H1 C5 180.0 180.2
H1 C1 C2 N3 179.9 179.8
H1 C1 C2 N12 358.7 359.8
H1 C1 C5 N4 181.2 180.2
H1 C1 C5 C6 356.4 0.1
S7 C8 H8 C9 180.0 180.1
H8 C8 C9 C10 182.7 179.8
H8 C8 C9 H9 2.7 0.1
C8 C9 H9 C10 180.0 179.7
H9 C9 C8 H8 2.7 0.1
H9 C9 C10 H10 359.7 360.0
C6 C10 H10 C9 180.0 179.8
H10 C10 C9 H9 359.7 360.0
N3 C11 H11 H11A 120.0 120.0
N3 C11 H11 H11B 240.0 240.0
H11A C11 H11 H11B 120.0 120.0
N3 C11 H11A H11 240.0 240.0
N3 C11 H11A H11B 120.0 120.0
H11 C11 H11A H11B 240.0 240.0
N3 C11 H11B H11 120.0 120.0
N3 C11 H11B H11A 240.0 240.0
H11 C11 H11B H11A 120.0 120.0
C2 N12 HN12 HN1A 120.0 180.0
C2 N12 HN1A HN12 239.9 180.0