PDB Chemical Component MPO
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MPO
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
S1 |
O1 |
1.493 |
1.421 |
S1 |
O2 |
1.494 |
1.420 |
S1 |
C1 |
1.815 |
1.813 |
S1 |
O3 |
1.495 |
1.521 |
O4 |
C5 |
1.423 |
1.426 |
O4 |
C6 |
1.433 |
1.427 |
N1 |
C3 |
1.574 |
1.469 |
N1 |
C4 |
1.505 |
1.469 |
N1 |
C7 |
1.500 |
1.467 |
C1 |
C2 |
1.516 |
1.530 |
C1 |
H11 |
1.115 |
1.090 |
C1 |
H12 |
1.114 |
1.090 |
O3 |
HO3 |
0.950 |
0.966 |
C2 |
C3 |
1.499 |
1.530 |
C2 |
H21 |
1.116 |
1.090 |
C2 |
H22 |
1.115 |
1.089 |
C3 |
H31 |
1.115 |
1.090 |
C3 |
H32 |
1.114 |
1.089 |
C4 |
C5 |
1.512 |
1.529 |
C4 |
H41 |
1.115 |
1.091 |
C4 |
H42 |
1.116 |
1.090 |
C5 |
H51 |
1.115 |
1.090 |
C5 |
H52 |
1.115 |
1.090 |
C6 |
C7 |
1.527 |
1.529 |
C6 |
H61 |
1.114 |
1.090 |
C6 |
H62 |
1.115 |
1.089 |
C7 |
H71 |
1.115 |
1.090 |
C7 |
H72 |
1.114 |
1.091 |
Bond Angles for MPO
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
S1 |
O2 |
111.1 |
122.1 |
O1 |
S1 |
C1 |
111.3 |
111.6 |
O1 |
S1 |
O3 |
107.7 |
102.8 |
O2 |
S1 |
C1 |
107.9 |
111.7 |
O2 |
S1 |
O3 |
109.8 |
102.8 |
C1 |
S1 |
O3 |
109.1 |
103.2 |
S1 |
C1 |
C2 |
109.1 |
109.5 |
S1 |
C1 |
H11 |
112.4 |
109.5 |
S1 |
C1 |
H12 |
112.4 |
109.5 |
S1 |
O3 |
HO3 |
107.7 |
106.9 |
C5 |
O4 |
C6 |
111.4 |
107.2 |
O4 |
C5 |
C4 |
109.8 |
109.8 |
O4 |
C5 |
H51 |
112.1 |
109.5 |
O4 |
C5 |
H52 |
112.1 |
109.4 |
O4 |
C6 |
C7 |
113.3 |
109.8 |
O4 |
C6 |
H61 |
110.8 |
109.5 |
O4 |
C6 |
H62 |
110.8 |
109.5 |
C3 |
N1 |
C4 |
110.1 |
106.7 |
C3 |
N1 |
C7 |
108.6 |
106.8 |
N1 |
C3 |
C2 |
106.6 |
109.4 |
N1 |
C3 |
H31 |
113.3 |
109.4 |
N1 |
C3 |
H32 |
113.3 |
109.6 |
C4 |
N1 |
C7 |
114.9 |
106.7 |
N1 |
C4 |
C5 |
110.2 |
109.6 |
N1 |
C4 |
H41 |
112.0 |
109.4 |
N1 |
C4 |
H42 |
112.0 |
109.5 |
N1 |
C7 |
C6 |
110.8 |
109.6 |
N1 |
C7 |
H71 |
111.7 |
109.5 |
N1 |
C7 |
H72 |
111.7 |
109.5 |
C2 |
C1 |
H11 |
112.3 |
109.5 |
C2 |
C1 |
H12 |
112.4 |
109.5 |
C1 |
C2 |
C3 |
107.3 |
109.4 |
C1 |
C2 |
H21 |
113.0 |
109.5 |
C1 |
C2 |
H22 |
113.0 |
109.5 |
H11 |
C1 |
H12 |
98.1 |
109.5 |
C3 |
C2 |
H21 |
113.0 |
109.4 |
C3 |
C2 |
H22 |
113.0 |
109.5 |
C2 |
C3 |
H31 |
113.3 |
109.4 |
C2 |
C3 |
H32 |
113.3 |
109.5 |
H21 |
C2 |
H22 |
97.4 |
109.5 |
H31 |
C3 |
H32 |
97.2 |
109.5 |
C5 |
C4 |
H41 |
112.0 |
109.4 |
C5 |
C4 |
H42 |
112.0 |
109.6 |
C4 |
C5 |
H51 |
112.1 |
109.5 |
C4 |
C5 |
H52 |
112.1 |
109.3 |
H41 |
C4 |
H42 |
98.4 |
109.4 |
H51 |
C5 |
H52 |
98.3 |
109.3 |
C7 |
C6 |
H61 |
110.8 |
109.4 |
C7 |
C6 |
H62 |
110.9 |
109.4 |
C6 |
C7 |
H71 |
111.7 |
109.5 |
C6 |
C7 |
H72 |
111.7 |
109.4 |
H61 |
C6 |
H62 |
99.5 |
109.3 |
H71 |
C7 |
H72 |
98.7 |
109.4 |
Torsion Angles for MPO
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O2 |
S1 |
O1 |
C1 |
120.3 |
135.8 |
O2 |
S1 |
O1 |
O3 |
239.8 |
245.8 |
C1 |
S1 |
O1 |
O3 |
119.5 |
110.0 |
O1 |
S1 |
C1 |
C2 |
75.5 |
70.3 |
O1 |
S1 |
C1 |
H11 |
200.8 |
190.3 |
O1 |
S1 |
C1 |
H12 |
310.2 |
310.2 |
O1 |
S1 |
O3 |
HO3 |
180.0 |
296.2 |
O1 |
S1 |
O2 |
C1 |
237.8 |
224.2 |
O1 |
S1 |
O2 |
O3 |
119.0 |
114.2 |
C1 |
S1 |
O2 |
O3 |
241.2 |
249.9 |
O2 |
S1 |
C1 |
C2 |
313.4 |
289.8 |
O2 |
S1 |
C1 |
H11 |
78.7 |
49.8 |
O2 |
S1 |
C1 |
H12 |
188.1 |
169.7 |
O2 |
S1 |
O3 |
HO3 |
301.1 |
63.8 |
O1 |
S1 |
C1 |
O2 |
122.1 |
140.5 |
O1 |
S1 |
C1 |
O3 |
241.3 |
250.3 |
O2 |
S1 |
C1 |
O3 |
119.2 |
109.8 |
C1 |
S1 |
O3 |
HO3 |
59.1 |
180.0 |
C2 |
C1 |
S1 |
H11 |
234.8 |
240.0 |
C2 |
C1 |
S1 |
H12 |
125.3 |
120.1 |
S1 |
C1 |
C2 |
C3 |
293.8 |
180.0 |
S1 |
C1 |
C2 |
H21 |
59.1 |
299.9 |
S1 |
C1 |
C2 |
H22 |
168.5 |
60.0 |
H11 |
C1 |
S1 |
H12 |
250.5 |
240.0 |
O1 |
S1 |
O3 |
O2 |
238.9 |
232.4 |
O1 |
S1 |
O3 |
C1 |
120.9 |
116.2 |
O2 |
S1 |
O3 |
C1 |
241.9 |
243.8 |
O3 |
S1 |
C1 |
C2 |
194.2 |
180.0 |
O3 |
S1 |
C1 |
H11 |
319.4 |
300.0 |
O3 |
S1 |
C1 |
H12 |
68.9 |
60.0 |
C5 |
O4 |
C6 |
C7 |
59.4 |
63.1 |
C5 |
O4 |
C6 |
H61 |
184.7 |
183.2 |
C5 |
O4 |
C6 |
H62 |
294.1 |
303.0 |
N1 |
C4 |
C5 |
O4 |
57.7 |
62.8 |
O4 |
C5 |
C4 |
H41 |
292.4 |
302.8 |
O4 |
C5 |
C4 |
H42 |
183.0 |
182.9 |
C4 |
C5 |
O4 |
H51 |
234.7 |
120.2 |
C4 |
C5 |
O4 |
H52 |
125.3 |
240.0 |
H51 |
C5 |
O4 |
H52 |
250.5 |
119.8 |
C6 |
O4 |
C5 |
C4 |
295.8 |
296.9 |
C6 |
O4 |
C5 |
H51 |
61.1 |
176.7 |
C6 |
O4 |
C5 |
H52 |
170.5 |
56.9 |
N1 |
C7 |
C6 |
O4 |
312.9 |
297.1 |
C7 |
C6 |
O4 |
H61 |
234.7 |
239.9 |
C7 |
C6 |
O4 |
H62 |
125.3 |
120.1 |
O4 |
C6 |
C7 |
H71 |
187.7 |
177.1 |
O4 |
C6 |
C7 |
H72 |
78.1 |
57.2 |
H61 |
C6 |
O4 |
H62 |
250.6 |
240.2 |
C4 |
N1 |
C3 |
C7 |
126.5 |
113.8 |
C3 |
N1 |
C4 |
C5 |
188.8 |
187.0 |
C3 |
N1 |
C4 |
H41 |
314.1 |
306.9 |
C3 |
N1 |
C4 |
H42 |
63.6 |
66.8 |
C3 |
N1 |
C7 |
C6 |
166.2 |
173.0 |
C3 |
N1 |
C7 |
H71 |
291.5 |
293.1 |
C3 |
N1 |
C7 |
H72 |
41.0 |
53.0 |
C1 |
C2 |
C3 |
N1 |
206.3 |
180.0 |
N1 |
C3 |
C2 |
H21 |
81.1 |
60.1 |
N1 |
C3 |
C2 |
H22 |
331.7 |
300.1 |
C2 |
C3 |
N1 |
H31 |
234.8 |
119.9 |
C2 |
C3 |
N1 |
H32 |
125.3 |
239.9 |
H31 |
C3 |
N1 |
H32 |
250.5 |
120.0 |
O4 |
C5 |
C4 |
N1 |
57.7 |
62.8 |
C3 |
N1 |
C4 |
C7 |
237.1 |
246.1 |
C4 |
N1 |
C3 |
C2 |
292.9 |
180.0 |
C4 |
N1 |
C3 |
H31 |
58.2 |
60.1 |
C4 |
N1 |
C3 |
H32 |
167.7 |
300.1 |
C4 |
N1 |
C7 |
C6 |
42.5 |
59.2 |
C4 |
N1 |
C7 |
H71 |
167.8 |
179.3 |
C4 |
N1 |
C7 |
H72 |
277.3 |
299.2 |
C5 |
C4 |
N1 |
H41 |
234.7 |
240.0 |
C5 |
C4 |
N1 |
H42 |
125.3 |
120.2 |
N1 |
C4 |
C5 |
H51 |
292.4 |
183.0 |
N1 |
C4 |
C5 |
H52 |
182.9 |
302.7 |
H41 |
C4 |
N1 |
H42 |
250.6 |
240.2 |
O4 |
C6 |
C7 |
N1 |
312.9 |
297.1 |
C3 |
N1 |
C7 |
C4 |
123.7 |
113.8 |
C7 |
N1 |
C3 |
C2 |
166.4 |
66.2 |
C7 |
N1 |
C3 |
H31 |
291.6 |
306.3 |
C7 |
N1 |
C3 |
H32 |
41.1 |
186.3 |
C7 |
N1 |
C4 |
C5 |
311.8 |
300.8 |
C7 |
N1 |
C4 |
H41 |
77.0 |
60.8 |
C7 |
N1 |
C4 |
H42 |
186.5 |
180.6 |
N1 |
C7 |
C6 |
H61 |
187.7 |
177.0 |
N1 |
C7 |
C6 |
H62 |
78.2 |
57.3 |
C6 |
C7 |
N1 |
H71 |
234.7 |
239.9 |
C6 |
C7 |
N1 |
H72 |
125.2 |
120.0 |
H71 |
C7 |
N1 |
H72 |
250.5 |
240.1 |
C2 |
C1 |
S1 |
O3 |
194.2 |
180.0 |
S1 |
C1 |
C2 |
H11 |
125.2 |
120.0 |
S1 |
C1 |
C2 |
H12 |
234.7 |
240.0 |
N1 |
C3 |
C2 |
C1 |
206.3 |
180.0 |
H11 |
C1 |
C2 |
H12 |
109.5 |
120.0 |
C3 |
C2 |
C1 |
H21 |
234.7 |
240.1 |
C3 |
C2 |
C1 |
H22 |
125.3 |
120.0 |
C1 |
C2 |
C3 |
H31 |
81.1 |
299.9 |
C1 |
C2 |
C3 |
H32 |
331.6 |
59.9 |
H21 |
C2 |
C1 |
H22 |
250.6 |
239.9 |
H11 |
C1 |
S1 |
O3 |
319.4 |
300.0 |
S1 |
C1 |
H11 |
C2 |
236.6 |
240.0 |
S1 |
C1 |
H11 |
H12 |
118.3 |
120.0 |
C2 |
C1 |
H11 |
H12 |
241.7 |
240.0 |
H11 |
C1 |
C2 |
C3 |
168.6 |
60.1 |
H11 |
C1 |
C2 |
H21 |
293.9 |
179.9 |
H11 |
C1 |
C2 |
H22 |
43.3 |
300.0 |
H12 |
C1 |
S1 |
O3 |
68.9 |
60.0 |
S1 |
C1 |
H12 |
C2 |
123.5 |
120.0 |
S1 |
C1 |
H12 |
H11 |
241.7 |
240.0 |
C2 |
C1 |
H12 |
H11 |
118.3 |
120.0 |
H12 |
C1 |
C2 |
C3 |
59.1 |
300.1 |
H12 |
C1 |
C2 |
H21 |
184.4 |
59.9 |
H12 |
C1 |
C2 |
H22 |
293.8 |
180.0 |
C2 |
C3 |
N1 |
C4 |
292.9 |
180.0 |
C2 |
C3 |
N1 |
C7 |
166.4 |
66.2 |
N1 |
C3 |
C2 |
H31 |
125.2 |
240.1 |
N1 |
C3 |
C2 |
H32 |
234.7 |
120.1 |
C3 |
C2 |
C1 |
H11 |
168.6 |
60.1 |
C3 |
C2 |
C1 |
H12 |
59.1 |
300.1 |
C1 |
C2 |
C3 |
H21 |
125.3 |
119.9 |
C1 |
C2 |
C3 |
H22 |
234.7 |
240.0 |
H21 |
C2 |
C3 |
H22 |
109.4 |
120.0 |
H31 |
C3 |
C2 |
H32 |
109.5 |
240.0 |
H21 |
C2 |
C1 |
H11 |
293.9 |
179.9 |
H21 |
C2 |
C1 |
H12 |
184.4 |
59.9 |
C1 |
C2 |
H21 |
C3 |
237.9 |
240.1 |
C1 |
C2 |
H21 |
H22 |
118.9 |
120.1 |
C3 |
C2 |
H21 |
H22 |
241.1 |
240.0 |
H21 |
C2 |
C3 |
H31 |
315.8 |
180.0 |
H21 |
C2 |
C3 |
H32 |
206.3 |
300.0 |
H22 |
C2 |
C1 |
H11 |
43.3 |
300.0 |
H22 |
C2 |
C1 |
H12 |
293.8 |
180.0 |
C1 |
C2 |
H22 |
C3 |
122.2 |
120.0 |
C1 |
C2 |
H22 |
H21 |
241.1 |
239.9 |
C3 |
C2 |
H22 |
H21 |
118.9 |
119.9 |
H22 |
C2 |
C3 |
H31 |
206.4 |
59.9 |
H22 |
C2 |
C3 |
H32 |
96.9 |
179.9 |
H31 |
C3 |
N1 |
C4 |
58.2 |
60.1 |
H31 |
C3 |
N1 |
C7 |
291.6 |
306.3 |
N1 |
C3 |
H31 |
C2 |
238.5 |
119.9 |
N1 |
C3 |
H31 |
H32 |
119.2 |
239.9 |
H31 |
C3 |
C2 |
H21 |
315.8 |
180.0 |
H31 |
C3 |
C2 |
H22 |
206.4 |
59.9 |
C2 |
C3 |
H31 |
H32 |
240.8 |
120.0 |
H32 |
C3 |
N1 |
C4 |
167.7 |
300.1 |
H32 |
C3 |
N1 |
C7 |
41.1 |
186.3 |
N1 |
C3 |
H32 |
C2 |
121.6 |
239.9 |
N1 |
C3 |
H32 |
H31 |
240.8 |
120.0 |
H32 |
C3 |
C2 |
H21 |
206.3 |
300.0 |
H32 |
C3 |
C2 |
H22 |
96.9 |
179.9 |
C2 |
C3 |
H32 |
H31 |
119.2 |
240.0 |
C4 |
C5 |
O4 |
C6 |
295.8 |
296.9 |
O4 |
C5 |
C4 |
H51 |
125.3 |
239.8 |
O4 |
C5 |
C4 |
H52 |
234.7 |
120.1 |
C5 |
C4 |
N1 |
C7 |
311.8 |
300.8 |
N1 |
C4 |
C5 |
H41 |
125.3 |
120.0 |
N1 |
C4 |
C5 |
H42 |
234.7 |
239.9 |
H41 |
C4 |
C5 |
H42 |
109.4 |
119.9 |
H51 |
C5 |
C4 |
H52 |
109.5 |
240.3 |
H41 |
C4 |
N1 |
C7 |
77.0 |
60.8 |
N1 |
C4 |
H41 |
C5 |
235.7 |
239.9 |
N1 |
C4 |
H41 |
H42 |
117.9 |
119.9 |
C5 |
C4 |
H41 |
H42 |
242.1 |
240.0 |
H41 |
C4 |
C5 |
H51 |
167.1 |
63.0 |
H41 |
C4 |
C5 |
H52 |
57.6 |
182.7 |
H42 |
C4 |
N1 |
C7 |
186.5 |
180.6 |
N1 |
C4 |
H42 |
C5 |
124.3 |
120.2 |
N1 |
C4 |
H42 |
H41 |
242.1 |
240.1 |
C5 |
C4 |
H42 |
H41 |
117.9 |
119.9 |
H42 |
C4 |
C5 |
H51 |
57.7 |
303.1 |
H42 |
C4 |
C5 |
H52 |
308.2 |
62.9 |
H51 |
C5 |
O4 |
C6 |
61.1 |
176.7 |
O4 |
C5 |
H51 |
C4 |
236.0 |
120.4 |
O4 |
C5 |
H51 |
H52 |
118.0 |
240.1 |
H51 |
C5 |
C4 |
H41 |
167.1 |
63.0 |
H51 |
C5 |
C4 |
H42 |
57.7 |
303.1 |
C4 |
C5 |
H51 |
H52 |
242.0 |
119.7 |
H52 |
C5 |
O4 |
C6 |
170.5 |
56.9 |
O4 |
C5 |
H52 |
C4 |
124.0 |
239.7 |
O4 |
C5 |
H52 |
H51 |
242.0 |
119.9 |
H52 |
C5 |
C4 |
H41 |
57.6 |
182.7 |
H52 |
C5 |
C4 |
H42 |
308.2 |
62.9 |
C4 |
C5 |
H52 |
H51 |
118.0 |
240.2 |
O4 |
C6 |
C7 |
H61 |
125.2 |
120.1 |
O4 |
C6 |
C7 |
H62 |
234.8 |
239.9 |
N1 |
C7 |
C6 |
H71 |
125.2 |
120.1 |
N1 |
C7 |
C6 |
H72 |
234.8 |
240.0 |
H61 |
C6 |
C7 |
H62 |
109.5 |
119.7 |
H71 |
C7 |
C6 |
H72 |
109.6 |
119.9 |
O4 |
C6 |
H61 |
C7 |
233.4 |
239.7 |
O4 |
C6 |
H61 |
H62 |
116.6 |
119.9 |
C7 |
C6 |
H61 |
H62 |
243.3 |
240.2 |
H61 |
C6 |
C7 |
H71 |
62.4 |
56.9 |
H61 |
C6 |
C7 |
H72 |
312.9 |
297.0 |
O4 |
C6 |
H62 |
C7 |
126.6 |
120.3 |
O4 |
C6 |
H62 |
H61 |
243.4 |
240.1 |
C7 |
C6 |
H62 |
H61 |
116.7 |
119.8 |
H62 |
C6 |
C7 |
H71 |
312.9 |
297.2 |
H62 |
C6 |
C7 |
H72 |
203.4 |
177.3 |
N1 |
C7 |
H71 |
C6 |
235.2 |
239.9 |
N1 |
C7 |
H71 |
H72 |
117.6 |
120.0 |
H71 |
C7 |
C6 |
H61 |
62.4 |
56.9 |
H71 |
C7 |
C6 |
H62 |
312.9 |
297.2 |
C6 |
C7 |
H71 |
H72 |
242.3 |
240.1 |
N1 |
C7 |
H72 |
C6 |
124.7 |
120.1 |
N1 |
C7 |
H72 |
H71 |
242.4 |
240.1 |
H72 |
C7 |
C6 |
H61 |
312.9 |
297.0 |
H72 |
C7 |
C6 |
H62 |
203.4 |
177.3 |
C6 |
C7 |
H72 |
H71 |
117.7 |
120.0 |