PDB Chemical Component MPH
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MPH
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.470 |
1.470 |
| N |
H |
1.020 |
1.009 |
| N |
HN2 |
1.019 |
1.008 |
| CA |
CB |
1.548 |
1.529 |
| CA |
P |
1.749 |
1.822 |
| CA |
HA |
1.115 |
1.090 |
| CB |
CG |
1.532 |
1.530 |
| CB |
HB1 |
1.115 |
1.089 |
| CB |
HB2 |
1.115 |
1.090 |
| CG |
SD |
1.798 |
1.813 |
| CG |
HG1 |
1.115 |
1.090 |
| CG |
HG2 |
1.114 |
1.089 |
| SD |
CE |
1.800 |
1.813 |
| CE |
HE1 |
1.115 |
1.089 |
| CE |
HE2 |
1.115 |
1.090 |
| CE |
HE3 |
1.115 |
1.091 |
| O1 |
P |
1.586 |
1.479 |
| O2 |
P |
1.583 |
1.610 |
| O2 |
HO2 |
0.951 |
0.967 |
| O3 |
P |
1.576 |
1.610 |
| O3 |
HO3 |
0.951 |
0.967 |
Bond Angles for MPH
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
112.9 |
106.6 |
| CA |
N |
HN2 |
110.9 |
106.7 |
| N |
CA |
CB |
112.9 |
109.5 |
| N |
CA |
P |
111.3 |
109.4 |
| N |
CA |
HA |
105.2 |
109.5 |
| H |
N |
HN2 |
111.0 |
106.7 |
| CB |
CA |
P |
107.5 |
109.5 |
| CB |
CA |
HA |
109.2 |
109.5 |
| CA |
CB |
CG |
112.7 |
109.4 |
| CA |
CB |
HB1 |
111.0 |
109.5 |
| CA |
CB |
HB2 |
111.0 |
109.4 |
| P |
CA |
HA |
110.8 |
109.5 |
| CA |
P |
O1 |
103.7 |
109.5 |
| CA |
P |
O2 |
109.1 |
109.5 |
| CA |
P |
O3 |
111.0 |
109.4 |
| CG |
CB |
HB1 |
111.0 |
109.5 |
| CG |
CB |
HB2 |
111.0 |
109.5 |
| CB |
CG |
SD |
106.5 |
109.5 |
| CB |
CG |
HG1 |
113.3 |
109.5 |
| CB |
CG |
HG2 |
113.3 |
109.5 |
| HB1 |
CB |
HB2 |
99.3 |
109.5 |
| SD |
CG |
HG1 |
113.3 |
109.4 |
| SD |
CG |
HG2 |
113.3 |
109.5 |
| CG |
SD |
CE |
98.8 |
100.1 |
| HG1 |
CG |
HG2 |
97.2 |
109.4 |
| SD |
CE |
HE1 |
98.7 |
109.5 |
| SD |
CE |
HE2 |
116.3 |
109.5 |
| SD |
CE |
HE3 |
116.3 |
109.4 |
| HE1 |
CE |
HE2 |
116.3 |
109.5 |
| HE1 |
CE |
HE3 |
116.4 |
109.4 |
| HE2 |
CE |
HE3 |
94.1 |
109.4 |
| O1 |
P |
O2 |
113.1 |
109.4 |
| O1 |
P |
O3 |
106.7 |
109.5 |
| P |
O2 |
HO2 |
109.0 |
106.9 |
| O2 |
P |
O3 |
112.9 |
109.5 |
| P |
O3 |
HO3 |
111.0 |
106.8 |
Torsion Angles for MPH
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
HN2 |
125.3 |
113.8 |
| CB |
CA |
N |
P |
239.1 |
240.0 |
| CB |
CA |
N |
HA |
119.0 |
120.1 |
| N |
CA |
CB |
CG |
286.9 |
180.0 |
| N |
CA |
CB |
HB1 |
52.2 |
60.0 |
| N |
CA |
CB |
HB2 |
161.6 |
300.0 |
| P |
CA |
N |
HA |
239.9 |
240.0 |
| N |
CA |
P |
O1 |
47.8 |
300.0 |
| N |
CA |
P |
O2 |
287.0 |
60.0 |
| N |
CA |
P |
O3 |
162.0 |
180.0 |
| CA |
N |
H |
HN2 |
234.7 |
246.2 |
| H |
N |
CA |
CB |
180.1 |
53.8 |
| H |
N |
CA |
P |
301.0 |
173.8 |
| H |
N |
CA |
HA |
61.1 |
293.7 |
| CA |
N |
HN2 |
H |
126.4 |
113.7 |
| HN2 |
N |
CA |
CB |
54.7 |
300.0 |
| HN2 |
N |
CA |
P |
175.7 |
60.0 |
| HN2 |
N |
CA |
HA |
295.7 |
180.0 |
| CB |
CA |
N |
H |
180.1 |
53.8 |
| CB |
CA |
N |
HN2 |
54.7 |
300.0 |
| N |
CA |
CB |
P |
123.1 |
120.0 |
| N |
CA |
CB |
HA |
243.3 |
240.0 |
| P |
CA |
CB |
HA |
120.3 |
120.0 |
| CB |
CA |
P |
O1 |
171.9 |
60.0 |
| CB |
CA |
P |
O2 |
51.1 |
179.9 |
| CB |
CA |
P |
O3 |
286.1 |
300.0 |
| CG |
CB |
CA |
HB1 |
234.7 |
120.0 |
| CG |
CB |
CA |
HB2 |
125.3 |
240.0 |
| CA |
CB |
CG |
SD |
177.7 |
179.9 |
| CA |
CB |
CG |
HG1 |
302.9 |
60.0 |
| CA |
CB |
CG |
HG2 |
52.4 |
300.0 |
| HB1 |
CB |
CA |
HB2 |
250.6 |
120.0 |
| P |
CA |
N |
H |
301.0 |
173.8 |
| P |
CA |
N |
HN2 |
175.7 |
60.0 |
| N |
CA |
P |
CB |
235.9 |
240.0 |
| N |
CA |
P |
HA |
116.7 |
120.0 |
| CB |
CA |
P |
HA |
240.8 |
239.9 |
| P |
CA |
CB |
CG |
163.9 |
60.0 |
| P |
CA |
CB |
HB1 |
289.2 |
300.0 |
| P |
CA |
CB |
HB2 |
38.6 |
180.0 |
| O1 |
P |
CA |
O2 |
120.8 |
240.0 |
| O1 |
P |
CA |
O3 |
245.8 |
120.0 |
| CA |
P |
O2 |
HO2 |
180.0 |
180.0 |
| O2 |
P |
CA |
O3 |
125.0 |
240.0 |
| CA |
P |
O3 |
HO3 |
180.0 |
299.9 |
| HA |
CA |
N |
H |
61.1 |
293.7 |
| HA |
CA |
N |
HN2 |
295.7 |
180.0 |
| N |
CA |
HA |
CB |
121.5 |
120.0 |
| N |
CA |
HA |
P |
239.6 |
240.1 |
| CB |
CA |
HA |
P |
118.2 |
120.0 |
| HA |
CA |
CB |
CG |
43.6 |
300.0 |
| HA |
CA |
CB |
HB1 |
168.9 |
180.0 |
| HA |
CA |
CB |
HB2 |
278.3 |
60.0 |
| HA |
CA |
P |
O1 |
291.1 |
180.0 |
| HA |
CA |
P |
O2 |
170.3 |
300.0 |
| HA |
CA |
P |
O3 |
45.3 |
60.0 |
| CG |
CB |
CA |
P |
163.9 |
60.0 |
| CG |
CB |
CA |
HA |
43.6 |
300.0 |
| CA |
CB |
CG |
HB1 |
125.3 |
240.0 |
| CA |
CB |
CG |
HB2 |
234.7 |
120.0 |
| HB1 |
CB |
CG |
HB2 |
109.4 |
240.0 |
| SD |
CG |
CB |
HG1 |
234.8 |
119.9 |
| SD |
CG |
CB |
HG2 |
125.3 |
239.9 |
| CB |
CG |
SD |
CE |
157.1 |
180.0 |
| HG1 |
CG |
CB |
HG2 |
250.5 |
120.0 |
| HB1 |
CB |
CA |
P |
289.2 |
300.0 |
| HB1 |
CB |
CA |
HA |
168.9 |
180.0 |
| CA |
CB |
HB1 |
CG |
233.7 |
120.0 |
| CA |
CB |
HB1 |
HB2 |
116.8 |
240.0 |
| CG |
CB |
HB1 |
HB2 |
243.1 |
120.0 |
| HB1 |
CB |
CG |
SD |
52.4 |
299.9 |
| HB1 |
CB |
CG |
HG1 |
177.6 |
180.0 |
| HB1 |
CB |
CG |
HG2 |
287.1 |
60.0 |
| HB2 |
CB |
CA |
P |
38.6 |
180.0 |
| HB2 |
CB |
CA |
HA |
278.3 |
60.0 |
| CA |
CB |
HB2 |
CG |
126.3 |
240.1 |
| CA |
CB |
HB2 |
HB1 |
243.2 |
120.0 |
| CG |
CB |
HB2 |
HB1 |
116.9 |
240.0 |
| HB2 |
CB |
CG |
SD |
303.0 |
60.0 |
| HB2 |
CB |
CG |
HG1 |
68.2 |
300.0 |
| HB2 |
CB |
CG |
HG2 |
177.7 |
180.1 |
| SD |
CG |
CB |
HB1 |
52.4 |
299.9 |
| SD |
CG |
CB |
HB2 |
303.0 |
60.0 |
| CB |
CG |
SD |
HG1 |
125.2 |
240.0 |
| CB |
CG |
SD |
HG2 |
234.7 |
120.1 |
| HG1 |
CG |
SD |
HG2 |
109.5 |
240.1 |
| CG |
SD |
CE |
HE1 |
180.1 |
180.0 |
| CG |
SD |
CE |
HE2 |
305.3 |
300.1 |
| CG |
SD |
CE |
HE3 |
54.7 |
60.0 |
| HG1 |
CG |
CB |
HB1 |
177.6 |
180.0 |
| HG1 |
CG |
CB |
HB2 |
68.2 |
300.0 |
| CB |
CG |
HG1 |
SD |
238.5 |
120.0 |
| CB |
CG |
HG1 |
HG2 |
119.3 |
240.0 |
| SD |
CG |
HG1 |
HG2 |
240.7 |
120.0 |
| HG1 |
CG |
SD |
CE |
31.8 |
300.0 |
| HG2 |
CG |
CB |
HB1 |
287.1 |
60.0 |
| HG2 |
CG |
CB |
HB2 |
177.7 |
180.1 |
| CB |
CG |
HG2 |
SD |
121.5 |
239.9 |
| CB |
CG |
HG2 |
HG1 |
240.8 |
120.0 |
| SD |
CG |
HG2 |
HG1 |
119.3 |
240.1 |
| HG2 |
CG |
SD |
CE |
282.3 |
59.9 |
| CE |
SD |
CG |
HG1 |
31.8 |
300.0 |
| CE |
SD |
CG |
HG2 |
282.3 |
59.9 |
| HE1 |
CE |
SD |
HE2 |
234.8 |
239.9 |
| HE1 |
CE |
SD |
HE3 |
125.3 |
120.0 |
| HE2 |
CE |
SD |
HE3 |
250.5 |
240.1 |
| SD |
CE |
HE1 |
HE2 |
125.2 |
120.1 |
| SD |
CE |
HE1 |
HE3 |
234.8 |
240.0 |
| HE2 |
CE |
HE1 |
HE3 |
109.6 |
119.9 |
| SD |
CE |
HE2 |
HE1 |
244.3 |
239.9 |
| SD |
CE |
HE2 |
HE3 |
122.1 |
119.9 |
| HE1 |
CE |
HE2 |
HE3 |
237.8 |
240.0 |
| SD |
CE |
HE3 |
HE1 |
115.8 |
120.0 |
| SD |
CE |
HE3 |
HE2 |
237.9 |
240.1 |
| HE1 |
CE |
HE3 |
HE2 |
122.2 |
120.0 |
| O1 |
P |
CA |
HA |
291.1 |
180.0 |
| CA |
P |
O1 |
O2 |
242.0 |
120.0 |
| CA |
P |
O1 |
O3 |
117.3 |
240.0 |
| O1 |
P |
O2 |
HO2 |
65.1 |
300.0 |
| O2 |
P |
O1 |
O3 |
235.3 |
120.0 |
| O1 |
P |
O3 |
HO3 |
292.4 |
180.0 |
| O2 |
P |
CA |
HA |
170.3 |
300.0 |
| CA |
P |
O2 |
O1 |
114.9 |
240.0 |
| CA |
P |
O2 |
O3 |
236.1 |
120.0 |
| O1 |
P |
O2 |
O3 |
121.2 |
240.0 |
| O2 |
P |
O3 |
HO3 |
57.2 |
60.0 |
| HO2 |
O2 |
P |
O3 |
303.9 |
60.0 |
| O3 |
P |
CA |
HA |
45.3 |
60.0 |
| CA |
P |
O3 |
O1 |
247.6 |
120.0 |
| CA |
P |
O3 |
O2 |
122.8 |
239.9 |
| O1 |
P |
O3 |
O2 |
235.2 |
120.0 |
| O3 |
P |
O2 |
HO2 |
303.9 |
60.0 |