PDB Chemical Component MPE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MPE
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O9 |
C7 |
1.218 |
1.207 |
C7 |
O8 |
1.218 |
1.342 |
C7 |
C6 |
1.495 |
1.507 |
O8 |
H8 |
0.950 |
0.967 |
C6 |
N5 |
1.441 |
1.468 |
C6 |
C10 |
1.482 |
1.506 |
C6 |
H6 |
1.115 |
1.090 |
N5 |
O4 |
1.429 |
1.463 |
N5 |
H5 |
1.020 |
1.008 |
O4 |
C3 |
1.421 |
1.428 |
C3 |
C2 |
1.517 |
1.529 |
C3 |
H31 |
1.115 |
1.091 |
C3 |
H32 |
1.115 |
1.090 |
C2 |
S1 |
1.800 |
1.814 |
C2 |
H21 |
1.114 |
1.090 |
C2 |
H22 |
1.114 |
1.090 |
S1 |
H1 |
0.950 |
1.345 |
C10 |
C11 |
1.380 |
1.342 |
C10 |
C14 |
1.473 |
1.464 |
C11 |
N12 |
1.365 |
1.369 |
C11 |
H11 |
1.103 |
1.080 |
N12 |
C13 |
1.355 |
1.377 |
N12 |
H12 |
1.020 |
0.970 |
C13 |
C15 |
1.386 |
1.391 |
C13 |
C14 |
1.478 |
1.406 |
C15 |
C16 |
1.393 |
1.377 |
C15 |
H15 |
1.103 |
1.080 |
C14 |
C18 |
1.386 |
1.395 |
C18 |
C17 |
1.390 |
1.367 |
C18 |
H18 |
1.104 |
1.080 |
C17 |
C16 |
1.396 |
1.388 |
C17 |
H17 |
1.104 |
1.080 |
C16 |
H16 |
1.103 |
1.079 |
Bond Angles for MPE
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O9 |
C7 |
O8 |
119.9 |
120.0 |
O9 |
C7 |
C6 |
119.3 |
120.1 |
O8 |
C7 |
C6 |
120.9 |
120.0 |
C7 |
O8 |
H8 |
119.8 |
120.0 |
C7 |
C6 |
N5 |
108.5 |
109.5 |
C7 |
C6 |
C10 |
111.2 |
109.5 |
C7 |
C6 |
H6 |
109.0 |
109.4 |
N5 |
C6 |
C10 |
109.3 |
109.5 |
N5 |
C6 |
H6 |
110.7 |
109.5 |
C6 |
N5 |
O4 |
120.4 |
106.7 |
C6 |
N5 |
H5 |
108.3 |
106.7 |
C10 |
C6 |
H6 |
108.1 |
109.4 |
C6 |
C10 |
C11 |
124.2 |
126.4 |
C6 |
C10 |
C14 |
124.5 |
126.5 |
O4 |
N5 |
H5 |
108.3 |
106.7 |
N5 |
O4 |
C3 |
119.3 |
106.8 |
O4 |
C3 |
C2 |
107.5 |
109.5 |
O4 |
C3 |
H31 |
112.9 |
109.4 |
O4 |
C3 |
H32 |
112.9 |
109.5 |
C2 |
C3 |
H31 |
112.9 |
109.5 |
C2 |
C3 |
H32 |
113.0 |
109.5 |
C3 |
C2 |
S1 |
111.3 |
109.5 |
C3 |
C2 |
H21 |
111.6 |
109.5 |
C3 |
C2 |
H22 |
111.6 |
109.5 |
H31 |
C3 |
H32 |
97.6 |
109.4 |
S1 |
C2 |
H21 |
111.6 |
109.4 |
S1 |
C2 |
H22 |
111.5 |
109.5 |
C2 |
S1 |
H1 |
111.3 |
100.0 |
H21 |
C2 |
H22 |
98.8 |
109.5 |
C11 |
C10 |
C14 |
111.3 |
107.0 |
C10 |
C11 |
N12 |
106.3 |
109.9 |
C10 |
C11 |
H11 |
127.2 |
125.1 |
C10 |
C14 |
C13 |
101.1 |
106.1 |
C10 |
C14 |
C18 |
137.9 |
134.0 |
N12 |
C11 |
H11 |
126.5 |
125.0 |
C11 |
N12 |
C13 |
112.8 |
109.8 |
C11 |
N12 |
H12 |
124.0 |
125.1 |
C13 |
N12 |
H12 |
123.3 |
125.1 |
N12 |
C13 |
C15 |
133.4 |
133.5 |
N12 |
C13 |
C14 |
108.5 |
107.1 |
C15 |
C13 |
C14 |
118.1 |
119.3 |
C13 |
C15 |
C16 |
119.8 |
119.8 |
C13 |
C15 |
H15 |
119.9 |
120.1 |
C13 |
C14 |
C18 |
121.0 |
119.9 |
C16 |
C15 |
H15 |
120.4 |
120.1 |
C15 |
C16 |
C17 |
121.4 |
120.6 |
C15 |
C16 |
H16 |
119.2 |
119.7 |
C14 |
C18 |
C17 |
118.5 |
119.8 |
C14 |
C18 |
H18 |
120.6 |
120.1 |
C17 |
C18 |
H18 |
120.9 |
120.1 |
C18 |
C17 |
C16 |
121.3 |
120.5 |
C18 |
C17 |
H17 |
119.2 |
119.8 |
C16 |
C17 |
H17 |
119.6 |
119.7 |
C17 |
C16 |
H16 |
119.3 |
119.6 |
Torsion Angles for MPE
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O8 |
C7 |
O9 |
C6 |
179.2 |
179.9 |
O9 |
C7 |
O8 |
H8 |
180.1 |
0.0 |
O9 |
C7 |
C6 |
N5 |
35.3 |
210.0 |
O9 |
C7 |
C6 |
C10 |
275.0 |
89.9 |
O9 |
C7 |
C6 |
H6 |
155.9 |
330.0 |
O9 |
C7 |
O8 |
C6 |
180.8 |
180.1 |
O8 |
C7 |
C6 |
N5 |
216.0 |
30.1 |
O8 |
C7 |
C6 |
C10 |
95.7 |
270.0 |
O8 |
C7 |
C6 |
H6 |
336.7 |
150.1 |
O9 |
C7 |
C6 |
O8 |
179.2 |
179.9 |
C6 |
C7 |
O8 |
H8 |
359.3 |
180.0 |
N5 |
C6 |
C7 |
C10 |
120.3 |
120.1 |
N5 |
C6 |
C7 |
H6 |
239.4 |
240.0 |
C7 |
C6 |
N5 |
O4 |
141.8 |
89.9 |
C7 |
C6 |
N5 |
H5 |
16.5 |
203.8 |
C10 |
C6 |
C7 |
H6 |
119.0 |
119.9 |
C7 |
C6 |
C10 |
C11 |
345.9 |
90.1 |
C7 |
C6 |
C10 |
C14 |
166.1 |
269.7 |
H8 |
O8 |
C7 |
C6 |
359.3 |
180.0 |
C7 |
C6 |
N5 |
C10 |
238.5 |
240.0 |
C7 |
C6 |
N5 |
H6 |
119.5 |
120.0 |
C10 |
C6 |
N5 |
H6 |
241.0 |
240.0 |
N5 |
C6 |
C10 |
C11 |
226.1 |
330.0 |
N5 |
C6 |
C10 |
C14 |
46.3 |
149.7 |
O4 |
N5 |
C6 |
H5 |
125.3 |
246.2 |
C6 |
N5 |
O4 |
C3 |
262.1 |
180.0 |
C7 |
C6 |
C10 |
N5 |
119.8 |
120.1 |
C7 |
C6 |
C10 |
H6 |
240.4 |
240.1 |
N5 |
C6 |
C10 |
H6 |
120.6 |
120.0 |
C10 |
C6 |
N5 |
O4 |
263.3 |
210.0 |
C10 |
C6 |
N5 |
H5 |
138.0 |
323.8 |
C11 |
C10 |
C6 |
C14 |
179.8 |
180.3 |
C6 |
C10 |
C11 |
N12 |
180.1 |
179.9 |
C6 |
C10 |
C11 |
H11 |
0.1 |
359.9 |
C6 |
C10 |
C14 |
C13 |
179.8 |
179.9 |
C6 |
C10 |
C14 |
C18 |
359.9 |
0.7 |
C7 |
C6 |
H6 |
N5 |
240.7 |
240.0 |
C7 |
C6 |
H6 |
C10 |
121.0 |
120.0 |
N5 |
C6 |
H6 |
C10 |
240.3 |
240.0 |
H6 |
C6 |
N5 |
O4 |
22.3 |
329.9 |
H6 |
C6 |
N5 |
H5 |
257.0 |
83.8 |
H6 |
C6 |
C10 |
C11 |
105.5 |
210.0 |
H6 |
C6 |
C10 |
C14 |
285.7 |
29.7 |
O4 |
N5 |
C6 |
C10 |
263.3 |
210.0 |
O4 |
N5 |
C6 |
H6 |
22.3 |
329.9 |
C6 |
N5 |
O4 |
H5 |
234.7 |
113.8 |
N5 |
O4 |
C3 |
C2 |
138.6 |
180.0 |
N5 |
O4 |
C3 |
H31 |
263.9 |
300.0 |
N5 |
O4 |
C3 |
H32 |
13.4 |
59.9 |
H5 |
N5 |
C6 |
C10 |
138.0 |
323.8 |
H5 |
N5 |
C6 |
H6 |
257.0 |
83.8 |
C6 |
N5 |
H5 |
O4 |
132.1 |
246.2 |
H5 |
N5 |
O4 |
C3 |
27.4 |
66.2 |
C3 |
O4 |
N5 |
H5 |
27.4 |
66.2 |
C2 |
C3 |
O4 |
H31 |
234.8 |
240.0 |
C2 |
C3 |
O4 |
H32 |
125.3 |
120.1 |
O4 |
C3 |
C2 |
S1 |
110.0 |
180.0 |
O4 |
C3 |
C2 |
H21 |
235.3 |
300.0 |
O4 |
C3 |
C2 |
H22 |
344.8 |
60.0 |
H31 |
C3 |
O4 |
H32 |
250.5 |
240.1 |
O4 |
C3 |
C2 |
H31 |
125.2 |
120.0 |
O4 |
C3 |
C2 |
H32 |
234.7 |
239.9 |
H31 |
C3 |
C2 |
H32 |
109.5 |
119.9 |
S1 |
C2 |
C3 |
H21 |
234.7 |
240.0 |
S1 |
C2 |
C3 |
H22 |
125.2 |
120.0 |
C3 |
C2 |
S1 |
H1 |
180.0 |
180.0 |
H21 |
C2 |
C3 |
H22 |
250.5 |
240.0 |
O4 |
C3 |
H31 |
C2 |
237.8 |
239.9 |
O4 |
C3 |
H31 |
H32 |
118.9 |
120.0 |
C2 |
C3 |
H31 |
H32 |
241.1 |
240.0 |
H31 |
C3 |
C2 |
S1 |
344.9 |
60.0 |
H31 |
C3 |
C2 |
H21 |
110.2 |
180.0 |
H31 |
C3 |
C2 |
H22 |
219.6 |
300.0 |
O4 |
C3 |
H32 |
C2 |
122.3 |
120.1 |
O4 |
C3 |
H32 |
H31 |
241.2 |
240.1 |
C2 |
C3 |
H32 |
H31 |
118.9 |
120.0 |
H32 |
C3 |
C2 |
S1 |
235.3 |
300.1 |
H32 |
C3 |
C2 |
H21 |
0.6 |
60.0 |
H32 |
C3 |
C2 |
H22 |
110.1 |
180.0 |
S1 |
C2 |
C3 |
H31 |
344.9 |
60.0 |
S1 |
C2 |
C3 |
H32 |
235.3 |
300.1 |
C3 |
C2 |
S1 |
H21 |
125.3 |
120.0 |
C3 |
C2 |
S1 |
H22 |
234.8 |
240.0 |
H21 |
C2 |
S1 |
H22 |
109.5 |
120.0 |
H21 |
C2 |
C3 |
H31 |
110.2 |
180.0 |
H21 |
C2 |
C3 |
H32 |
0.6 |
60.0 |
C3 |
C2 |
H21 |
S1 |
234.9 |
240.0 |
C3 |
C2 |
H21 |
H22 |
117.5 |
120.0 |
S1 |
C2 |
H21 |
H22 |
242.6 |
240.0 |
H21 |
C2 |
S1 |
H1 |
54.7 |
60.0 |
H22 |
C2 |
C3 |
H31 |
219.6 |
300.0 |
H22 |
C2 |
C3 |
H32 |
110.1 |
180.0 |
C3 |
C2 |
H22 |
S1 |
125.1 |
120.0 |
C3 |
C2 |
H22 |
H21 |
242.5 |
240.0 |
S1 |
C2 |
H22 |
H21 |
117.5 |
120.0 |
H22 |
C2 |
S1 |
H1 |
305.3 |
300.0 |
H1 |
S1 |
C2 |
H21 |
54.7 |
60.0 |
H1 |
S1 |
C2 |
H22 |
305.3 |
300.0 |
C11 |
C10 |
C6 |
H6 |
105.5 |
210.0 |
C6 |
C10 |
C11 |
C14 |
180.2 |
179.7 |
C11 |
C10 |
C14 |
C13 |
0.0 |
359.6 |
C11 |
C10 |
C14 |
C18 |
180.1 |
180.4 |
N12 |
C11 |
C10 |
H11 |
180.0 |
180.0 |
C10 |
C11 |
N12 |
C13 |
0.1 |
0.0 |
C10 |
C11 |
N12 |
H12 |
180.1 |
180.0 |
C14 |
C10 |
C6 |
H6 |
285.7 |
29.7 |
C6 |
C10 |
C14 |
C11 |
179.8 |
180.3 |
C14 |
C10 |
C11 |
N12 |
359.9 |
0.2 |
C14 |
C10 |
C11 |
H11 |
180.0 |
180.2 |
N12 |
C13 |
C14 |
C10 |
0.1 |
0.4 |
C15 |
C13 |
C14 |
C10 |
180.1 |
180.1 |
C13 |
C14 |
C10 |
C18 |
179.9 |
179.2 |
C10 |
C14 |
C18 |
C17 |
180.2 |
179.6 |
C10 |
C14 |
C18 |
H18 |
0.2 |
359.4 |
N12 |
C11 |
C10 |
C14 |
359.9 |
0.2 |
C10 |
C11 |
N12 |
H11 |
180.0 |
180.0 |
C13 |
N12 |
C11 |
H12 |
180.0 |
180.0 |
C11 |
N12 |
C13 |
C15 |
179.9 |
180.1 |
C11 |
N12 |
C13 |
C14 |
359.9 |
359.7 |
H11 |
C11 |
C10 |
C14 |
180.0 |
180.2 |
C10 |
C11 |
H11 |
N12 |
180.0 |
180.0 |
H11 |
C11 |
N12 |
C13 |
180.1 |
180.0 |
H11 |
C11 |
N12 |
H12 |
0.1 |
0.0 |
C10 |
C14 |
C13 |
N12 |
0.1 |
0.4 |
C13 |
N12 |
C11 |
H11 |
180.1 |
180.0 |
C11 |
N12 |
C13 |
H12 |
180.0 |
180.0 |
C15 |
C13 |
N12 |
C14 |
180.0 |
180.3 |
N12 |
C13 |
C15 |
C16 |
180.0 |
180.0 |
N12 |
C13 |
C15 |
H15 |
360.0 |
359.9 |
N12 |
C13 |
C14 |
C18 |
180.0 |
179.7 |
H12 |
N12 |
C11 |
H11 |
0.1 |
0.0 |
C11 |
N12 |
H12 |
C13 |
180.0 |
180.0 |
H12 |
N12 |
C13 |
C15 |
359.9 |
0.1 |
H12 |
N12 |
C13 |
C14 |
179.9 |
179.7 |
C10 |
C14 |
C13 |
C15 |
180.1 |
180.1 |
C15 |
C13 |
N12 |
H12 |
359.9 |
0.1 |
N12 |
C13 |
C15 |
C14 |
180.0 |
179.6 |
C15 |
C13 |
C14 |
C18 |
0.0 |
359.4 |
C16 |
C15 |
C13 |
H15 |
180.0 |
180.1 |
C13 |
C15 |
C16 |
C17 |
359.8 |
359.9 |
C13 |
C15 |
C16 |
H16 |
179.8 |
179.9 |
C10 |
C14 |
C13 |
C18 |
180.1 |
180.7 |
C14 |
C13 |
N12 |
H12 |
179.9 |
179.7 |
N12 |
C13 |
C14 |
C15 |
180.0 |
180.3 |
C14 |
C13 |
C15 |
C16 |
359.9 |
0.3 |
C14 |
C13 |
C15 |
H15 |
179.9 |
180.2 |
C13 |
C14 |
C18 |
C17 |
0.3 |
0.5 |
C13 |
C14 |
C18 |
H18 |
180.3 |
180.3 |
C16 |
C15 |
C13 |
C14 |
359.9 |
0.3 |
C13 |
C15 |
C16 |
H15 |
180.0 |
179.9 |
C18 |
C17 |
C16 |
C15 |
0.5 |
360.0 |
C15 |
C16 |
C17 |
H17 |
180.5 |
180.1 |
C17 |
C16 |
C15 |
H16 |
180.0 |
180.0 |
H15 |
C15 |
C13 |
C14 |
179.9 |
180.2 |
C13 |
C15 |
H15 |
C16 |
180.0 |
180.1 |
H15 |
C15 |
C16 |
C17 |
179.9 |
180.1 |
H15 |
C15 |
C16 |
H16 |
359.8 |
0.1 |
C10 |
C14 |
C18 |
C13 |
179.9 |
179.1 |
C17 |
C18 |
C14 |
H18 |
180.0 |
180.2 |
C14 |
C18 |
C17 |
C16 |
359.5 |
359.8 |
C14 |
C18 |
C17 |
H17 |
179.5 |
179.7 |
C15 |
C16 |
C17 |
C18 |
0.5 |
360.0 |
C14 |
C18 |
C17 |
H18 |
180.0 |
179.8 |
C16 |
C17 |
C18 |
H17 |
180.0 |
180.1 |
C18 |
C17 |
C16 |
H16 |
180.5 |
180.0 |
C14 |
C18 |
H18 |
C17 |
180.0 |
180.2 |
H18 |
C18 |
C17 |
C16 |
179.5 |
180.0 |
H18 |
C18 |
C17 |
H17 |
359.5 |
359.9 |
C17 |
C16 |
C15 |
H15 |
179.9 |
180.1 |
C15 |
C16 |
C17 |
H16 |
180.0 |
180.0 |
C16 |
C17 |
C18 |
H18 |
179.5 |
180.0 |
C18 |
C17 |
C16 |
H17 |
180.0 |
179.9 |
H17 |
C17 |
C18 |
H18 |
359.5 |
359.9 |
C18 |
C17 |
H17 |
C16 |
180.0 |
180.1 |
H17 |
C17 |
C16 |
H16 |
0.5 |
0.1 |
H16 |
C16 |
C15 |
H15 |
359.8 |
0.1 |
C15 |
C16 |
H16 |
C17 |
180.0 |
180.0 |
H16 |
C16 |
C17 |
H17 |
0.5 |
0.1 |