PDB Chemical Component MP8
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MP8
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C |
O |
1.225 |
1.208 |
| C |
CA |
1.525 |
1.507 |
| C |
OXT |
1.430 |
1.342 |
| N |
CA |
1.478 |
1.485 |
| N |
CD |
1.465 |
1.485 |
| N |
H |
1.001 |
1.009 |
| CA |
CB |
1.522 |
1.544 |
| CA |
HA |
1.100 |
1.089 |
| CB |
CG |
1.487 |
1.543 |
| CB |
HB |
1.100 |
1.090 |
| CB |
HBA |
1.099 |
1.091 |
| CD |
CG |
1.503 |
1.544 |
| CD |
HD |
1.100 |
1.090 |
| CD |
HDA |
1.100 |
1.090 |
| CE |
CG |
1.523 |
1.530 |
| CE |
HE |
1.099 |
1.090 |
| CE |
HEA |
1.100 |
1.090 |
| CE |
HEB |
1.100 |
1.090 |
| CG |
HG |
1.100 |
1.090 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for MP8
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O |
C |
CA |
123.8 |
120.0 |
| O |
C |
OXT |
118.1 |
120.0 |
| CA |
C |
OXT |
118.1 |
120.0 |
| C |
CA |
N |
112.4 |
110.4 |
| C |
CA |
CB |
109.4 |
110.4 |
| C |
CA |
HA |
106.0 |
110.3 |
| C |
OXT |
HXT |
109.5 |
117.0 |
| CA |
N |
CD |
112.1 |
104.2 |
| CA |
N |
H |
108.6 |
111.0 |
| N |
CA |
CB |
104.3 |
104.6 |
| N |
CA |
HA |
111.0 |
110.4 |
| CD |
N |
H |
108.6 |
111.0 |
| N |
CD |
CG |
105.0 |
104.6 |
| N |
CD |
HD |
111.0 |
110.4 |
| N |
CD |
HDA |
111.0 |
110.5 |
| CB |
CA |
HA |
114.0 |
110.5 |
| CA |
CB |
CG |
106.6 |
105.0 |
| CA |
CB |
HB |
110.4 |
110.4 |
| CA |
CB |
HBA |
110.4 |
110.3 |
| CG |
CB |
HB |
110.5 |
110.3 |
| CG |
CB |
HBA |
110.5 |
110.3 |
| CB |
CG |
CD |
108.4 |
105.0 |
| CB |
CG |
CE |
111.9 |
110.3 |
| CB |
CG |
HG |
112.2 |
110.3 |
| HB |
CB |
HBA |
108.5 |
110.3 |
| CG |
CD |
HD |
111.0 |
110.4 |
| CG |
CD |
HDA |
111.0 |
110.4 |
| CD |
CG |
CE |
118.2 |
110.3 |
| CD |
CG |
HG |
104.9 |
110.4 |
| HD |
CD |
HDA |
107.9 |
110.4 |
| CG |
CE |
HE |
109.5 |
109.5 |
| CG |
CE |
HEA |
109.5 |
109.5 |
| CG |
CE |
HEB |
109.4 |
109.5 |
| CE |
CG |
HG |
100.8 |
110.4 |
| HE |
CE |
HEA |
109.5 |
109.5 |
| HE |
CE |
HEB |
109.5 |
109.5 |
| HEA |
CE |
HEB |
109.5 |
109.5 |
Torsion Angles for MP8
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
C |
O |
OXT |
180.0 |
180.3 |
| O |
C |
CA |
N |
14.7 |
341.5 |
| O |
C |
CA |
CB |
130.0 |
96.6 |
| O |
C |
CA |
HA |
253.3 |
219.1 |
| O |
C |
OXT |
HXT |
360.0 |
0.0 |
| O |
C |
CA |
OXT |
180.0 |
179.7 |
| CA |
C |
OXT |
HXT |
179.9 |
179.7 |
| C |
CA |
N |
CD |
105.9 |
158.3 |
| C |
CA |
N |
H |
225.9 |
277.8 |
| N |
CA |
C |
CB |
244.7 |
244.8 |
| N |
CA |
C |
HA |
121.4 |
122.4 |
| CB |
CA |
C |
HA |
236.7 |
237.5 |
| C |
CA |
CB |
CG |
258.1 |
217.3 |
| C |
CA |
CB |
HB |
18.1 |
336.3 |
| C |
CA |
CB |
HBA |
138.1 |
98.5 |
| O |
C |
OXT |
CA |
180.0 |
180.3 |
| OXT |
C |
CA |
N |
194.7 |
161.7 |
| OXT |
C |
CA |
CB |
310.0 |
276.9 |
| OXT |
C |
CA |
HA |
73.3 |
39.4 |
| N |
CA |
C |
OXT |
194.7 |
161.7 |
| C |
CA |
N |
CB |
118.4 |
118.8 |
| C |
CA |
N |
HA |
241.5 |
237.7 |
| CD |
N |
CA |
H |
240.0 |
240.5 |
| CA |
N |
CD |
CG |
1.3 |
320.5 |
| CA |
N |
CD |
HD |
121.3 |
79.3 |
| CA |
N |
CD |
HDA |
241.4 |
201.7 |
| CB |
CA |
N |
HA |
123.1 |
119.0 |
| N |
CA |
CB |
CG |
18.6 |
336.1 |
| N |
CA |
CB |
HB |
138.6 |
95.1 |
| N |
CA |
CB |
HBA |
258.6 |
217.3 |
| CA |
N |
CD |
H |
120.0 |
119.6 |
| CD |
N |
CA |
CB |
347.6 |
39.5 |
| CD |
N |
CA |
HA |
224.5 |
280.6 |
| CB |
CG |
CD |
N |
10.8 |
23.9 |
| CG |
CD |
N |
HD |
240.0 |
241.2 |
| CG |
CD |
N |
HDA |
120.0 |
118.8 |
| N |
CD |
CG |
CE |
139.5 |
142.7 |
| N |
CD |
CG |
HG |
250.8 |
264.9 |
| HD |
CD |
N |
HDA |
240.0 |
237.5 |
| CA |
N |
H |
CD |
237.9 |
244.6 |
| H |
N |
CA |
CB |
107.6 |
159.1 |
| H |
N |
CA |
HA |
344.4 |
40.1 |
| H |
N |
CD |
CG |
241.4 |
200.9 |
| H |
N |
CD |
HD |
1.4 |
319.7 |
| H |
N |
CD |
HDA |
121.4 |
82.2 |
| CB |
CA |
C |
OXT |
310.0 |
276.9 |
| C |
CA |
CB |
N |
239.6 |
241.2 |
| C |
CA |
CB |
HA |
118.4 |
122.3 |
| CB |
CA |
N |
CD |
347.6 |
39.5 |
| CB |
CA |
N |
H |
107.6 |
159.1 |
| N |
CA |
CB |
HA |
238.9 |
241.1 |
| CG |
CB |
CA |
HB |
240.0 |
241.1 |
| CG |
CB |
CA |
HBA |
120.0 |
118.9 |
| CA |
CB |
CG |
CD |
341.5 |
0.0 |
| CA |
CB |
CG |
CE |
209.4 |
241.1 |
| CA |
CB |
CG |
HG |
96.9 |
119.0 |
| HB |
CB |
CA |
HBA |
240.0 |
237.8 |
| HA |
CA |
C |
OXT |
73.3 |
39.4 |
| C |
CA |
HA |
N |
122.3 |
122.4 |
| C |
CA |
HA |
CB |
239.7 |
237.6 |
| HA |
CA |
N |
CD |
224.5 |
280.6 |
| HA |
CA |
N |
H |
344.4 |
40.1 |
| N |
CA |
HA |
CB |
117.3 |
115.3 |
| HA |
CA |
CB |
CG |
139.7 |
95.0 |
| HA |
CA |
CB |
HB |
259.7 |
213.9 |
| HA |
CA |
CB |
HBA |
19.7 |
336.1 |
| N |
CD |
CG |
CB |
10.8 |
23.9 |
| CG |
CB |
CA |
HA |
139.7 |
95.0 |
| CA |
CB |
CG |
HB |
120.0 |
119.0 |
| CA |
CB |
CG |
HBA |
240.0 |
241.1 |
| HB |
CB |
CG |
HBA |
120.0 |
122.1 |
| CB |
CG |
CD |
HD |
250.8 |
265.0 |
| CB |
CG |
CD |
HDA |
130.8 |
142.7 |
| CD |
CG |
CB |
CE |
132.1 |
118.9 |
| CD |
CG |
CB |
HG |
244.6 |
241.1 |
| CB |
CG |
CE |
HE |
180.0 |
60.0 |
| CB |
CG |
CE |
HEA |
300.0 |
180.0 |
| CB |
CG |
CE |
HEB |
60.0 |
300.0 |
| CE |
CG |
CB |
HG |
112.5 |
122.2 |
| HB |
CB |
CA |
HA |
259.7 |
213.9 |
| CA |
CB |
HB |
CG |
242.4 |
244.3 |
| CA |
CB |
HB |
HBA |
121.2 |
122.2 |
| CG |
CB |
HB |
HBA |
238.8 |
237.9 |
| HB |
CB |
CG |
CD |
221.5 |
241.0 |
| HB |
CB |
CG |
CE |
89.4 |
122.2 |
| HB |
CB |
CG |
HG |
336.9 |
360.0 |
| HBA |
CB |
CA |
HA |
19.7 |
336.1 |
| CA |
CB |
HBA |
CG |
117.6 |
115.6 |
| CA |
CB |
HBA |
HB |
238.8 |
237.8 |
| CG |
CB |
HBA |
HB |
121.2 |
122.1 |
| HBA |
CB |
CG |
CD |
101.5 |
118.9 |
| HBA |
CB |
CG |
CE |
329.4 |
0.0 |
| HBA |
CB |
CG |
HG |
216.9 |
237.9 |
| CG |
CD |
N |
H |
241.4 |
200.9 |
| N |
CD |
CG |
HD |
120.0 |
118.8 |
| N |
CD |
CG |
HDA |
240.0 |
241.2 |
| CD |
CG |
CB |
HB |
221.5 |
241.0 |
| CD |
CG |
CB |
HBA |
101.5 |
118.9 |
| CB |
CG |
CD |
CE |
231.3 |
241.1 |
| CB |
CG |
CD |
HG |
120.0 |
118.9 |
| HD |
CD |
CG |
HDA |
120.0 |
122.4 |
| CD |
CG |
CE |
HE |
53.0 |
304.4 |
| CD |
CG |
CE |
HEA |
173.0 |
64.4 |
| CD |
CG |
CE |
HEB |
293.0 |
184.4 |
| CE |
CG |
CD |
HG |
248.7 |
237.8 |
| HD |
CD |
N |
H |
1.4 |
319.7 |
| N |
CD |
HD |
CG |
243.6 |
244.8 |
| N |
CD |
HD |
HDA |
121.8 |
122.5 |
| CG |
CD |
HD |
HDA |
238.2 |
237.7 |
| HD |
CD |
CG |
CE |
19.4 |
23.9 |
| HD |
CD |
CG |
HG |
130.7 |
146.1 |
| HDA |
CD |
N |
H |
121.4 |
82.2 |
| N |
CD |
HDA |
CG |
116.4 |
115.2 |
| N |
CD |
HDA |
HD |
238.2 |
237.5 |
| CG |
CD |
HDA |
HD |
121.8 |
122.4 |
| HDA |
CD |
CG |
CE |
259.4 |
261.5 |
| HDA |
CD |
CG |
HG |
10.7 |
23.8 |
| CE |
CG |
CB |
HB |
89.4 |
122.2 |
| CE |
CG |
CB |
HBA |
329.4 |
0.0 |
| CB |
CG |
CE |
CD |
127.0 |
115.6 |
| CB |
CG |
CE |
HG |
240.6 |
237.8 |
| CE |
CG |
CD |
HD |
19.4 |
23.9 |
| CE |
CG |
CD |
HDA |
259.4 |
261.5 |
| CD |
CG |
CE |
HG |
113.6 |
122.2 |
| HE |
CE |
CG |
HEA |
240.0 |
240.0 |
| HE |
CE |
CG |
HEB |
120.0 |
120.0 |
| HEA |
CE |
CG |
HEB |
240.0 |
240.0 |
| CG |
CE |
HE |
HEA |
120.0 |
120.0 |
| CG |
CE |
HE |
HEB |
240.0 |
240.0 |
| HE |
CE |
CG |
HG |
299.4 |
182.2 |
| HEA |
CE |
HE |
HEB |
120.0 |
120.0 |
| CG |
CE |
HEA |
HE |
240.0 |
240.0 |
| CG |
CE |
HEA |
HEB |
120.0 |
120.0 |
| HEA |
CE |
CG |
HG |
59.4 |
302.2 |
| HE |
CE |
HEA |
HEB |
240.0 |
240.0 |
| CG |
CE |
HEB |
HE |
120.0 |
120.0 |
| CG |
CE |
HEB |
HEA |
240.0 |
240.0 |
| HEB |
CE |
CG |
HG |
179.4 |
62.2 |
| HE |
CE |
HEB |
HEA |
120.0 |
120.0 |
| HG |
CG |
CB |
HB |
336.9 |
360.0 |
| HG |
CG |
CB |
HBA |
216.9 |
237.9 |
| CB |
CG |
HG |
CD |
242.5 |
244.4 |
| CB |
CG |
HG |
CE |
119.2 |
122.2 |
| HG |
CG |
CD |
HD |
130.7 |
146.1 |
| HG |
CG |
CD |
HDA |
10.7 |
23.8 |
| CD |
CG |
HG |
CE |
236.7 |
237.8 |
| HG |
CG |
CE |
HE |
299.4 |
182.2 |
| HG |
CG |
CE |
HEA |
59.4 |
302.2 |
| HG |
CG |
CE |
HEB |
179.4 |
62.2 |