PDB Chemical Component MP4

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MP4

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C4 C5 1.388 1.386
C4 C3 1.381 1.387
C4 CH3 1.536 1.506
C5 C6 1.393 1.388
C5 O10 1.381 1.359
C6 C1 1.385 1.382
C6 H6 1.080 1.080
N CA 1.496 1.469
N H2 1.000 1.010
N H 1.000 1.009
C3 O3 1.355 1.359
C3 C2 1.392 1.388
O3 HO3 0.950 0.967
C2 C1 1.392 1.382
C2 H3 1.080 1.080
C1 CA 1.538 1.507
CA C 1.544 1.507
CA HA 1.100 1.090
C O 1.234 1.208
C OXT 1.430 1.342
CH3 HH3 1.100 1.090
CH3 HH3A 1.100 1.091
CH3 HH3B 1.100 1.091
O10 HO10 0.950 0.967
OXT HXT 0.950 0.966

Bond Angles for MP4

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C5 C4 C3 119.7 119.9
C5 C4 CH3 119.8 120.1
C4 C5 C6 120.6 120.0
C4 C5 O10 119.2 120.0
C3 C4 CH3 120.4 120.0
C4 C3 O3 119.5 120.0
C4 C3 C2 120.0 119.9
C4 CH3 HH3 109.5 109.5
C4 CH3 HH3A 109.5 109.5
C4 CH3 HH3B 109.4 109.5
C6 C5 O10 120.1 120.0
C5 C6 C1 119.5 120.1
C5 C6 H6 120.2 120.0
C5 O10 HO10 109.5 113.9
C1 C6 H6 120.2 119.9
C6 C1 C2 119.9 120.1
C6 C1 CA 121.3 120.0
CA N H2 109.5 110.9
CA N H 109.5 111.0
N CA C1 111.9 109.5
N CA C 117.3 109.5
N CA HA 105.4 109.4
H2 N H 109.5 111.0
O3 C3 C2 120.4 120.0
C3 O3 HO3 109.5 113.9
C3 C2 C1 120.2 120.1
C3 C2 H3 119.9 120.0
C1 C2 H3 119.9 119.9
C2 C1 CA 118.7 120.0
C1 CA C 111.2 109.5
C1 CA HA 104.9 109.5
C CA HA 104.8 109.5
CA C O 118.7 120.0
CA C OXT 120.7 120.0
O C OXT 120.7 120.0
C OXT HXT 109.5 117.0
HH3 CH3 HH3A 109.5 109.4
HH3 CH3 HH3B 109.5 109.5
HH3A CH3 HH3B 109.5 109.4

Torsion Angles for MP4

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C3 C4 C5 CH3 180.6 180.2
C5 C4 C3 O3 175.4 180.0
C5 C4 C3 C2 359.3 0.1
C5 C4 CH3 HH3 90.3 90.0
C5 C4 CH3 HH3A 210.3 210.0
C5 C4 CH3 HH3B 330.3 330.0
C6 C5 C4 O10 176.5 180.1
C4 C5 C6 C1 359.0 360.0
C4 C5 C6 H6 179.0 180.0
C4 C5 O10 HO10 180.0 90.0
C5 C4 C3 CH3 179.3 179.8
C3 C4 C5 C6 1.0 360.0
C3 C4 C5 O10 184.5 179.9
C3 C4 CH3 HH3 269.7 269.8
C3 C4 CH3 HH3A 29.7 29.8
C3 C4 CH3 HH3B 149.7 149.7
O3 C3 C4 C2 176.2 179.9
C4 C3 O3 HO3 180.0 90.1
C4 C3 C2 C1 0.4 359.9
C4 C3 C2 H3 180.5 179.9
C5 C4 CH3 C3 180.7 180.2
CH3 C4 C5 C6 180.4 179.8
CH3 C4 C5 O10 3.9 359.7
CH3 C4 C3 O3 356.1 0.2
CH3 C4 C3 C2 179.9 180.3
HH3 CH3 C4 HH3A 240.0 240.0
HH3 CH3 C4 HH3B 120.0 120.0
HH3A CH3 C4 HH3B 240.0 240.0
C6 C5 C4 C3 1.0 360.0
C6 C5 C4 CH3 180.4 179.8
C4 C5 C6 O10 183.6 179.9
C6 C5 O10 HO10 3.5 269.9
C1 C6 C5 H6 180.0 180.0
C5 C6 C1 C2 0.7 360.0
C5 C6 C1 CA 181.3 180.0
O10 C5 C4 C3 184.5 179.9
O10 C5 C4 CH3 3.9 359.7
C4 C5 O10 C6 176.5 180.1
O10 C5 C6 C1 175.4 180.1
O10 C5 C6 H6 355.5 0.1
C1 C6 C5 O10 175.4 180.1
C5 C6 C1 H6 180.0 180.0
N CA C1 C6 35.9 220.0
C3 C2 C1 C6 359.6 0.1
C6 C1 C2 H3 179.6 180.0
C2 C1 C6 CA 179.3 179.9
C6 C1 CA C 262.5 100.0
C6 C1 CA HA 149.6 339.9
H6 C6 C5 O10 355.5 0.1
C5 C6 H6 C1 180.0 180.0
H6 C6 C1 C2 180.7 180.0
H6 C6 C1 CA 1.3 0.0
C6 C1 CA N 35.9 220.0
H2 N CA H 240.0 236.1
C2 C1 CA N 216.5 40.1
C1 CA N C 229.7 240.0
C1 CA N HA 113.5 119.9
C CA N HA 243.8 240.0
N CA C O 117.5 340.0
N CA C OXT 297.5 160.0
CA N H2 H 120.0 123.9
H2 N CA C1 180.0 300.0
H2 N CA C 310.3 60.0
H2 N CA HA 66.5 180.0
CA N H H2 240.0 236.1
H N CA C1 300.0 63.9
H N CA C 70.4 183.9
H N CA HA 186.5 304.0
O3 C3 C4 CH3 356.1 0.2
C4 C3 O3 C2 183.8 180.1
O3 C3 C2 C1 184.3 180.0
O3 C3 C2 H3 4.3 0.0
C2 C3 C4 CH3 179.9 180.3
C4 C3 C2 O3 176.1 179.9
C6 C1 C2 C3 359.6 0.1
C2 C3 O3 HO3 356.2 270.0
C1 C2 C3 H3 180.0 180.0
C3 C2 C1 CA 179.0 180.0
HO3 O3 C3 C2 356.2 270.0
C2 C1 C6 H6 180.7 180.0
C6 C1 C2 CA 180.6 180.1
N CA C1 C2 216.5 40.1
C3 C2 C1 H3 180.0 180.0
C2 C1 CA C 83.1 280.0
C2 C1 CA HA 330.3 160.0
C3 C2 H3 C1 180.0 180.0
H3 C2 C1 CA 358.9 360.0
CA C1 C6 H6 1.3 0.0
C6 C1 CA C2 179.4 179.9
C1 CA N H2 180.0 300.0
C1 CA N H 300.0 63.9
N CA C1 C 133.4 120.1
N CA C1 HA 246.2 240.1
CA C1 C2 H3 358.9 360.0
C CA C1 HA 112.8 120.0
C1 CA C O 248.1 100.0
C1 CA C OXT 68.2 280.0
C CA N H2 310.3 60.0
C CA N H 70.4 183.9
N CA C C1 229.3 240.0
N CA C HA 116.4 120.0
C1 CA C HA 247.1 240.0
O C CA OXT 180.0 180.0
CA C OXT HXT 180.0 180.0
HA CA N H2 66.5 180.0
HA CA N H 186.5 304.0
N CA HA C1 118.3 119.9
N CA HA C 235.6 240.0
C1 CA HA C 117.3 120.0
HA CA C O 1.0 220.0
HA CA C OXT 181.1 40.0
O C CA HA 1.0 220.0
CA C O OXT 180.0 180.0
O C OXT HXT 0.0 359.9
OXT C CA HA 181.1 40.0
CA C OXT O 179.9 180.0
C4 CH3 HH3 HH3A 120.0 120.0
C4 CH3 HH3 HH3B 240.0 240.0
HH3A CH3 HH3 HH3B 120.0 119.9
C4 CH3 HH3A HH3 240.0 239.9
C4 CH3 HH3A HH3B 120.0 120.0
HH3 CH3 HH3A HH3B 240.0 240.0
C4 CH3 HH3B HH3 120.0 120.1
C4 CH3 HH3B HH3A 240.0 240.0
HH3 CH3 HH3B HH3A 120.0 119.9