PDB Chemical Component MOT

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MOT

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N1 C2 1.353 1.323
N1 C8A 1.367 1.330
C2 NA2 1.446 1.385
C2 N3 1.243 1.326
NA2 HN21 1.020 0.970
NA2 HN22 1.020 0.970
N3 C4 1.346 1.330
C4 NA4 1.267 1.383
C4 C4A 1.339 1.402
NA4 HN41 1.020 0.970
NA4 HN42 1.021 0.969
C4A C6 1.444 1.465
C4A C8A 1.383 1.404
C6 C7 1.318 1.340
C6 C9 1.560 1.507
C7 O8 1.319 1.346
C7 H7 1.102 1.080
O8 C8A 1.245 1.342
C9 N10 1.568 1.466
C9 H91 1.115 1.090
C9 H92 1.115 1.089
N10 CM 1.512 1.465
N10 C14 1.353 1.390
CM HM1 1.115 1.089
CM HM2 1.115 1.090
CM HM3 1.115 1.090
C11 C12 1.384 1.398
C11 C16 1.388 1.398
C11 C 1.327 1.475
C12 C13 1.400 1.375
C12 H12 1.103 1.080
C13 C14 1.330 1.392
C13 H13 1.103 1.080
C14 C15 1.412 1.393
C15 C16 1.372 1.376
C15 H15 1.103 1.078
C16 H16 1.102 1.080
C O 1.209 1.216
C N 1.374 1.347
N CA 1.491 1.465
N HN 1.020 0.969
CA CT 1.524 1.507
CA CB 1.575 1.529
CA HA 1.115 1.090
CT O1 1.254 1.208
CT O2 1.258 1.342
O2 HO2 0.950 0.967
CB CG 1.476 1.529
CB HB1 1.115 1.090
CB HB2 1.115 1.090
CG CD 1.514 1.507
CG HG1 1.114 1.090
CG HG2 1.115 1.090
CD OE1 1.224 1.208
CD OE2 1.260 1.342
OE2 HOE2 0.950 0.967

Bond Angles for MOT

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C8A 109.6 120.7
N1 C2 NA2 108.9 118.8
N1 C2 N3 130.0 122.5
N1 C8A C4A 123.8 118.5
N1 C8A O8 118.1 134.3
NA2 C2 N3 121.0 118.7
C2 NA2 HN21 108.9 120.0
C2 NA2 HN22 112.4 120.0
C2 N3 C4 119.1 120.9
HN21 NA2 HN22 112.4 120.0
N3 C4 NA4 114.8 120.8
N3 C4 C4A 118.5 118.4
NA4 C4 C4A 125.9 120.8
C4 NA4 HN41 114.8 120.0
C4 NA4 HN42 110.3 120.0
C4 C4A C6 144.3 135.4
C4 C4A C8A 118.0 119.0
HN41 NA4 HN42 110.2 120.0
C6 C4A C8A 97.4 105.6
C4A C6 C7 107.9 106.1
C4A C6 C9 123.4 126.9
C4A C8A O8 118.1 107.2
C7 C6 C9 128.7 127.0
C6 C7 O8 111.7 110.0
C6 C7 H7 124.1 125.0
C6 C9 N10 104.2 109.4
C6 C9 H91 114.2 109.4
C6 C9 H92 114.2 109.5
O8 C7 H7 124.2 125.0
C7 O8 C8A 104.7 111.0
N10 C9 H91 114.2 109.4
N10 C9 H92 114.2 109.5
C9 N10 CM 104.7 119.9
C9 N10 C14 127.7 120.0
H91 C9 H92 96.2 109.5
CM N10 C14 124.9 120.0
N10 CM HM1 104.7 109.5
N10 CM HM2 114.0 109.5
N10 CM HM3 114.0 109.5
N10 C14 C13 130.3 120.0
N10 C14 C15 119.4 119.9
HM1 CM HM2 114.1 109.5
HM1 CM HM3 114.0 109.5
HM2 CM HM3 96.4 109.5
C12 C11 C16 114.7 119.8
C12 C11 C 117.4 120.1
C11 C12 C13 121.5 120.0
C11 C12 H12 118.7 120.0
C16 C11 C 127.9 120.0
C11 C16 C15 120.1 120.0
C11 C16 H16 120.5 120.1
C11 C O 122.0 119.9
C11 C N 116.6 120.1
C13 C12 H12 119.8 120.0
C12 C13 C14 126.5 120.1
C12 C13 H13 119.7 120.0
C14 C13 H13 113.9 119.9
C13 C14 C15 110.1 120.1
C14 C15 C16 126.9 120.0
C14 C15 H15 118.1 120.0
C16 C15 H15 115.0 120.0
C15 C16 H16 119.4 120.0
O C N 121.0 120.0
C N CA 123.5 120.0
C N HN 113.9 119.9
CA N HN 122.6 120.0
N CA CT 106.5 109.5
N CA CB 99.9 109.5
N CA HA 115.1 109.5
CT CA CB 102.9 109.5
CT CA HA 112.6 109.5
CA CT O1 117.7 120.0
CA CT O2 124.9 120.0
CB CA HA 118.2 109.5
CA CB CG 113.5 109.5
CA CB HB1 110.7 109.5
CA CB HB2 110.7 109.5
O1 CT O2 117.1 120.0
CT O2 HO2 124.9 120.0
CG CB HB1 110.8 109.4
CG CB HB2 110.8 109.4
CB CG CD 111.2 109.5
CB CG HG1 111.5 109.5
CB CG HG2 111.5 109.5
HB1 CB HB2 99.6 109.5
CD CG HG1 111.6 109.5
CD CG HG2 111.6 109.4
CG CD OE1 123.7 120.0
CG CD OE2 106.7 120.0
HG1 CG HG2 98.9 109.4
OE1 CD OE2 129.3 120.0
CD OE2 HOE2 106.7 120.0

Torsion Angles for MOT

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 N1 C8A C4A 353.3 0.2
C2 N1 C8A O8 174.0 180.0
NA2 C2 N1 N3 176.5 180.0
N1 C2 NA2 HN21 180.0 180.0
N1 C2 NA2 HN22 54.8 0.1
N1 C2 N3 C4 359.7 0.0
C8A N1 C2 NA2 184.1 180.0
C8A N1 C2 N3 7.6 0.0
C4 C4A C8A N1 359.3 359.4
C6 C4A C8A N1 184.3 180.2
C4A C8A N1 O8 179.4 180.2
C7 O8 C8A N1 173.8 180.0
NA2 C2 N1 C8A 184.1 180.0
N1 C2 NA2 N3 183.1 180.0
NA2 C2 N3 C4 183.6 180.0
HN21 NA2 C2 HN22 125.2 179.9
N3 C2 N1 C8A 7.6 0.0
N1 C2 N3 NA2 176.2 180.0
N3 C2 NA2 HN21 356.9 360.0
N3 C2 NA2 HN22 231.7 180.1
C2 N3 C4 NA4 181.1 179.9
C2 N3 C4 C4A 351.6 359.6
HN21 NA2 C2 N3 356.9 360.0
C2 NA2 HN21 HN22 234.8 180.1
HN22 NA2 C2 N3 231.7 180.1
C2 NA2 HN22 HN21 123.3 179.9
NA4 C4 N3 C4A 189.6 180.3
N3 C4 NA4 HN41 180.0 0.0
N3 C4 NA4 HN42 54.7 180.0
N3 C4 C4A C6 180.0 179.6
N3 C4 C4A C8A 8.6 0.6
N3 C4 NA4 C4A 169.6 179.7
NA4 C4 C4A C6 349.3 359.2
NA4 C4 C4A C8A 177.9 180.3
HN41 NA4 C4 HN42 125.3 180.1
N1 C8A C4A C4 359.3 359.4
N3 C4 C4A NA4 190.7 180.3
C4A C4 NA4 HN41 10.4 180.3
C4A C4 NA4 HN42 245.1 0.3
C6 C4A C4 C8A 171.4 178.9
C4 C4A C6 C7 187.5 180.6
C4 C4A C6 C9 7.4 0.8
C4 C4A C8A O8 178.7 179.6
HN41 NA4 C4 C4A 10.4 180.3
C4 NA4 HN41 HN42 234.7 179.9
HN42 NA4 C4 C4A 245.1 0.3
C4 NA4 HN42 HN41 127.8 180.1
N1 C8A C4A C6 184.3 180.2
C4 C4A C6 C8A 187.7 181.0
C6 C4A C8A O8 3.7 0.4
C7 C6 C4A C9 180.1 179.8
C4A C6 C7 O8 357.0 0.3
C4A C6 C7 H7 177.0 180.2
C4A C6 C9 N10 198.9 179.7
C4A C6 C9 H91 324.2 59.8
C4A C6 C9 H92 73.6 299.7
N1 C8A C4A O8 180.6 179.8
C4 C4A C8A C6 174.9 179.2
C8A C4A C6 C7 359.8 359.6
C8A C4A C6 C9 179.7 179.8
C7 O8 C8A C4A 354.4 359.8
C7 C6 C4A C8A 359.8 359.6
C4A C6 C7 C9 179.9 180.2
C7 C6 C9 N10 18.8 359.9
C7 C6 C9 H91 144.1 240.1
C7 C6 C9 H92 253.5 120.0
O8 C7 C6 H7 180.0 180.1
C6 C7 O8 C8A 5.1 360.0
C9 C6 C4A C8A 179.7 179.8
C4A C6 C9 C7 180.1 179.8
C9 C6 C7 O8 177.1 180.1
C9 C6 C7 H7 357.1 0.0
N10 C9 C6 H91 234.7 119.9
N10 C9 C6 H92 125.3 240.0
C6 C9 N10 CM 260.3 90.0
C6 C9 N10 C14 62.2 270.0
H91 C9 C6 H92 250.6 120.1
N1 C8A O8 C7 173.8 180.0
C4A C8A O8 C7 354.4 359.8
O8 C7 C6 C9 177.1 180.1
C6 C7 O8 H7 180.0 179.9
H7 C7 C6 C9 357.1 0.0
C6 C7 H7 O8 180.0 180.1
H7 C7 O8 C8A 185.1 180.0
N1 C8A O8 C4A 179.4 180.2
C8A O8 C7 H7 185.1 180.0
C6 C9 N10 H91 125.3 240.1
C6 C9 N10 H92 234.7 120.0
H91 C9 N10 H92 109.5 240.0
CM N10 C9 C14 198.1 180.0
C9 N10 CM HM1 180.0 360.0
C9 N10 CM HM2 305.3 120.0
C9 N10 CM HM3 54.7 240.0
C9 N10 C14 C13 20.5 180.0
C9 N10 C14 C15 194.0 359.7
C6 C9 H91 N10 240.2 119.9
C6 C9 H91 H92 120.1 239.9
N10 C9 H91 H92 239.9 120.0
H91 C9 N10 CM 135.0 209.9
H91 C9 N10 C14 296.9 29.9
C6 C9 H92 N10 119.8 240.0
C6 C9 H92 H91 239.9 120.0
N10 C9 H92 H91 120.1 240.0
H92 C9 N10 CM 25.5 330.0
H92 C9 N10 C14 187.4 150.0
CM N10 C9 H91 135.0 209.9
CM N10 C9 H92 25.5 330.0
C9 N10 CM C14 162.6 180.0
CM N10 C14 C13 179.0 360.0
CM N10 C14 C15 352.5 179.7
HM1 CM N10 HM2 234.7 240.0
HM1 CM N10 HM3 125.3 120.0
HM2 CM N10 HM3 250.6 240.0
C14 N10 C9 H91 296.9 29.9
C14 N10 C9 H92 187.4 150.0
C9 N10 C14 CM 201.5 180.0
C14 N10 CM HM1 17.4 180.0
C14 N10 CM HM2 142.7 300.0
C14 N10 CM HM3 252.1 60.0
C12 C13 C14 N10 179.0 180.0
N10 C14 C13 H13 359.0 360.0
C13 C14 N10 C15 186.4 180.3
N10 C14 C15 C16 184.0 179.7
N10 C14 C15 H15 4.1 0.3
HM1 CM N10 C14 17.4 180.0
N10 CM HM1 HM2 125.3 120.0
N10 CM HM1 HM3 234.8 240.0
HM2 CM HM1 HM3 109.5 120.0
HM2 CM N10 C14 142.7 300.0
N10 CM HM2 HM1 239.8 240.0
N10 CM HM2 HM3 119.9 120.0
HM1 CM HM2 HM3 240.1 240.0
HM3 CM N10 C14 252.1 60.0
N10 CM HM3 HM1 120.1 120.0
N10 CM HM3 HM2 240.1 240.0
HM1 CM HM3 HM2 120.0 120.0
C16 C11 C12 C 182.4 180.0
C12 C11 C16 C15 3.5 359.7
C12 C11 C16 H16 183.4 179.9
C12 C11 C O 179.1 360.0
C12 C11 C N 351.7 180.0
C13 C12 C11 H12 180.0 180.1
C11 C12 C13 C14 355.3 360.0
C11 C12 C13 H13 175.3 180.0
C12 C11 C16 C 177.3 180.0
C16 C11 C12 C13 359.9 0.1
C16 C11 C12 H12 179.9 180.0
C16 C11 C O 356.3 180.0
C16 C11 C N 168.9 0.1
C14 C15 C16 C11 357.0 0.6
C11 C16 C15 H15 176.9 180.0
C15 C16 C11 H16 180.0 179.7
C12 C11 C C16 182.8 180.0
C C11 C12 C13 177.5 180.1
C C11 C12 H12 357.5 360.0
C C11 C16 C15 186.2 179.7
C C11 C16 H16 6.1 359.9
O C C11 N 187.4 179.9
C11 C N CA 184.4 179.9
C11 C N HN 4.4 360.0
N10 C14 C13 C12 179.0 180.0
C13 C12 C11 C16 359.9 0.1
C13 C12 C11 C 177.5 180.1
C11 C12 C13 H12 180.0 179.9
C14 C13 C12 H13 180.0 179.9
C12 C13 C14 C15 5.0 0.3
H12 C12 C11 C16 179.9 180.0
H12 C12 C11 C 357.5 360.0
C11 C12 H12 C13 180.0 180.1
H12 C12 C13 C14 175.3 180.0
H12 C12 C13 H13 355.3 0.1
N10 C14 C13 C15 174.0 179.7
C14 C13 C12 H12 175.3 180.0
C12 C13 C14 H13 180.0 180.1
C13 C14 C15 C16 358.8 359.4
C13 C14 C15 H15 178.8 180.0
H13 C13 C12 H12 355.3 0.1
C12 C13 H13 C14 180.0 179.9
H13 C13 C14 C15 185.0 180.2
N10 C14 C15 C13 185.2 180.3
C11 C16 C15 C14 357.0 0.6
C15 C14 C13 H13 185.0 180.2
C16 C15 C14 H15 180.0 179.4
C14 C15 C16 H16 177.0 180.3
C15 C16 C11 C 186.2 179.7
C11 C16 C15 H16 180.0 180.3
C14 C15 C16 H15 180.0 180.6
C14 C15 H15 C16 180.0 179.4
H15 C15 C16 H16 357.0 359.7
H16 C16 C11 C 6.1 359.9
C11 C16 H16 C15 180.0 179.7
H16 C16 C15 H15 357.0 359.7
C11 C O N 172.3 180.1
O C N CA 357.1 0.0
O C N HN 177.1 180.0
C11 C N O 187.3 179.9
CA N C HN 180.0 180.0
C N CA CT 203.9 270.0
C N CA CB 97.2 150.0
C N CA HA 329.5 30.0
C N CA HN 180.0 180.0
CT CA N CB 106.7 120.0
CT CA N HA 234.4 240.0
N CA CT O1 330.6 150.0
N CA CT O2 156.6 330.0
CB CA N HA 127.7 120.0
N CA CB CG 181.9 300.0
N CA CB HB1 307.2 60.0
N CA CB HB2 56.7 180.0
C N HN CA 180.0 180.0
HN N CA CT 23.9 90.0
HN N CA CB 277.2 330.0
HN N CA HA 149.5 210.0
CT CA N HN 23.9 90.0
N CA CT CB 255.4 240.0
N CA CT HA 127.1 120.0
CB CA CT HA 231.6 240.0
CT CA CB CG 72.4 180.0
CT CA CB HB1 197.6 300.0
CT CA CB HB2 307.1 60.1
O1 CT CA O2 174.0 180.0
CA CT O2 HO2 180.0 180.0
CB CA N HN 277.2 330.0
N CA CB CT 109.6 120.0
N CA CB HA 234.4 240.0
CT CA CB HA 124.8 120.0
CB CA CT O1 75.1 270.0
CB CA CT O2 261.2 90.0
CG CB CA HB1 234.7 240.0
CG CB CA HB2 125.3 120.0
CA CB CG CD 153.3 180.0
CA CB CG HG1 278.6 300.0
CA CB CG HG2 28.0 60.0
HB1 CB CA HB2 250.6 239.9
HA CA N HN 149.5 210.0
N CA HA CT 237.7 240.0
N CA HA CB 117.8 120.0
CT CA HA CB 240.1 240.0
HA CA CT O1 203.5 30.0
HA CA CT O2 29.6 210.0
HA CA CB CG 307.5 60.0
HA CA CB HB1 72.8 180.0
HA CA CB HB2 182.3 300.0
O1 CT CA CB 75.1 270.0
O1 CT CA HA 203.5 30.0
CA CT O1 O2 185.5 180.0
O1 CT O2 HO2 6.0 360.0
O2 CT CA CB 261.2 90.0
O2 CT CA HA 29.6 210.0
CA CT O2 O1 174.0 180.0
CG CB CA HA 307.5 60.0
CA CB CG HB1 125.3 120.0
CA CB CG HB2 234.8 240.0
HB1 CB CG HB2 109.5 120.0
CD CG CB HG1 234.7 240.0
CD CG CB HG2 125.3 120.0
CB CG CD OE1 12.0 0.0
CB CG CD OE2 197.9 180.0
HG1 CG CB HG2 250.5 240.0
HB1 CB CA HA 72.8 180.0
CA CB HB1 CG 233.2 240.0
CA CB HB1 HB2 116.6 120.0
CG CB HB1 HB2 243.4 240.1
HB1 CB CG CD 28.0 60.0
HB1 CB CG HG1 153.3 180.0
HB1 CB CG HG2 262.7 300.0
HB2 CB CA HA 182.3 300.0
CA CB HB2 CG 126.8 120.0
CA CB HB2 HB1 243.4 240.0
CG CB HB2 HB1 116.6 119.9
HB2 CB CG CD 278.5 300.0
HB2 CB CG HG1 43.8 60.0
HB2 CB CG HG2 153.3 180.0
CD CG CB HB1 28.0 60.0
CD CG CB HB2 278.5 300.0
CB CG CD HG1 125.2 120.0
CB CG CD HG2 234.8 240.0
HG1 CG CD HG2 109.6 120.0
OE1 CD CG OE2 174.1 180.0
CG CD OE2 HOE2 180.0 180.0
HG1 CG CB HB1 153.3 180.0
HG1 CG CB HB2 43.8 60.0
CB CG HG1 CD 234.9 239.9
CB CG HG1 HG2 117.4 120.0
CD CG HG1 HG2 242.5 240.0
HG1 CG CD OE1 246.7 240.0
HG1 CG CD OE2 72.6 60.0
HG2 CG CB HB1 262.7 300.0
HG2 CG CB HB2 153.3 180.0
CB CG HG2 CD 125.1 120.0
CB CG HG2 HG1 242.6 240.0
CD CG HG2 HG1 117.5 120.0
HG2 CG CD OE1 137.2 120.0
HG2 CG CD OE2 323.1 300.0
OE1 CD CG HG1 246.7 240.0
OE1 CD CG HG2 137.2 120.0
CG CD OE1 OE2 187.3 180.0
OE1 CD OE2 HOE2 6.4 0.0
OE2 CD CG HG1 72.6 60.0
OE2 CD CG HG2 323.1 300.0
CG CD OE2 OE1 173.6 180.0