PDB Chemical Component MNB
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MNB
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C6 |
C1 |
1.421 |
1.383 |
C6 |
C5 |
1.402 |
1.397 |
C6 |
HC6 |
1.103 |
1.080 |
C1 |
C2 |
1.411 |
1.418 |
C1 |
C10 |
1.388 |
1.480 |
C2 |
C3 |
1.397 |
1.405 |
C2 |
N7 |
1.465 |
1.340 |
C3 |
C4 |
1.427 |
1.364 |
C3 |
HC3 |
1.104 |
1.079 |
C4 |
C5 |
1.405 |
1.396 |
C4 |
HC4 |
1.103 |
1.080 |
C5 |
S5 |
1.835 |
1.763 |
S5 |
HS5 |
0.950 |
1.409 |
C10 |
O12 |
1.252 |
1.346 |
C10 |
O11 |
1.266 |
1.214 |
O12 |
H12 |
0.950 |
0.967 |
N7 |
O9 |
1.377 |
1.415 |
N7 |
O8 |
1.376 |
1.218 |
Bond Angles for MNB
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C6 |
C5 |
120.1 |
119.9 |
C1 |
C6 |
HC6 |
120.6 |
120.1 |
C6 |
C1 |
C2 |
119.7 |
119.5 |
C6 |
C1 |
C10 |
119.9 |
120.2 |
C5 |
C6 |
HC6 |
119.3 |
120.1 |
C6 |
C5 |
C4 |
119.7 |
120.4 |
C6 |
C5 |
S5 |
120.5 |
119.9 |
C2 |
C1 |
C10 |
120.4 |
120.3 |
C1 |
C2 |
C3 |
120.8 |
119.7 |
C1 |
C2 |
N7 |
120.3 |
120.2 |
C1 |
C10 |
O12 |
118.5 |
120.0 |
C1 |
C10 |
O11 |
120.3 |
119.9 |
C3 |
C2 |
N7 |
118.9 |
120.2 |
C2 |
C3 |
C4 |
118.9 |
120.1 |
C2 |
C3 |
HC3 |
119.5 |
120.0 |
C2 |
N7 |
O9 |
122.5 |
120.0 |
C2 |
N7 |
O8 |
122.3 |
120.0 |
C4 |
C3 |
HC3 |
121.6 |
119.8 |
C3 |
C4 |
C5 |
120.8 |
120.5 |
C3 |
C4 |
HC4 |
120.4 |
119.7 |
C5 |
C4 |
HC4 |
118.8 |
119.8 |
C4 |
C5 |
S5 |
119.8 |
119.7 |
C5 |
S5 |
HS5 |
120.5 |
100.0 |
O12 |
C10 |
O11 |
121.2 |
120.0 |
C10 |
O12 |
H12 |
118.4 |
120.0 |
O9 |
N7 |
O8 |
115.2 |
120.0 |
Torsion Angles for MNB
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C5 |
C6 |
C1 |
HC6 |
180.0 |
180.0 |
C1 |
C6 |
C5 |
C4 |
0.2 |
0.1 |
C1 |
C6 |
C5 |
S5 |
180.9 |
180.0 |
C2 |
C1 |
C6 |
C10 |
181.2 |
180.2 |
C6 |
C1 |
C2 |
C3 |
0.1 |
359.5 |
C6 |
C1 |
C2 |
N7 |
179.7 |
180.0 |
C6 |
C1 |
C10 |
O12 |
104.3 |
323.8 |
C6 |
C1 |
C10 |
O11 |
283.6 |
143.8 |
C1 |
C6 |
C5 |
HC6 |
180.0 |
180.0 |
C5 |
C6 |
C1 |
C2 |
359.7 |
0.2 |
C5 |
C6 |
C1 |
C10 |
178.5 |
180.0 |
C3 |
C4 |
C5 |
C6 |
0.0 |
359.9 |
C6 |
C5 |
C4 |
HC4 |
180.0 |
180.0 |
C4 |
C5 |
C6 |
S5 |
179.3 |
180.0 |
C6 |
C5 |
S5 |
HS5 |
180.0 |
90.0 |
C1 |
C6 |
HC6 |
C5 |
180.0 |
180.0 |
HC6 |
C6 |
C1 |
C2 |
179.7 |
180.2 |
HC6 |
C6 |
C1 |
C10 |
358.5 |
360.0 |
HC6 |
C6 |
C5 |
C4 |
180.2 |
180.1 |
HC6 |
C6 |
C5 |
S5 |
0.9 |
0.0 |
C2 |
C1 |
C6 |
C5 |
359.7 |
0.2 |
C2 |
C1 |
C6 |
HC6 |
179.7 |
180.2 |
C6 |
C1 |
C2 |
C10 |
178.8 |
179.8 |
C2 |
C1 |
C10 |
O12 |
283.1 |
143.6 |
C2 |
C1 |
C10 |
O11 |
102.4 |
323.6 |
C3 |
C2 |
C1 |
N7 |
180.4 |
179.6 |
C1 |
C2 |
C3 |
C4 |
0.2 |
0.5 |
C1 |
C2 |
C3 |
HC3 |
180.1 |
180.2 |
C1 |
C2 |
N7 |
O9 |
72.8 |
139.4 |
C1 |
C2 |
N7 |
O8 |
253.5 |
319.3 |
C10 |
C1 |
C6 |
C5 |
178.5 |
180.0 |
C10 |
C1 |
C6 |
HC6 |
358.5 |
360.0 |
C6 |
C1 |
C10 |
C2 |
181.2 |
180.2 |
C10 |
C1 |
C2 |
C3 |
181.4 |
179.7 |
C10 |
C1 |
C2 |
N7 |
1.0 |
0.2 |
O12 |
C10 |
C1 |
O11 |
180.7 |
179.9 |
C1 |
C10 |
O12 |
H12 |
180.0 |
180.0 |
C3 |
C2 |
C1 |
C10 |
181.4 |
179.7 |
C1 |
C2 |
C3 |
N7 |
179.6 |
180.4 |
C3 |
C2 |
N7 |
O9 |
252.4 |
319.9 |
C3 |
C2 |
N7 |
O8 |
73.1 |
139.8 |
C4 |
C3 |
C2 |
HC3 |
180.0 |
180.3 |
C2 |
C3 |
C4 |
C5 |
359.8 |
359.8 |
C2 |
C3 |
C4 |
HC4 |
179.8 |
179.7 |
N7 |
C2 |
C1 |
C10 |
1.0 |
0.2 |
C1 |
C2 |
N7 |
C3 |
180.4 |
179.6 |
N7 |
C2 |
C3 |
C4 |
180.5 |
180.0 |
N7 |
C2 |
C3 |
HC3 |
0.5 |
359.7 |
O9 |
N7 |
C2 |
O8 |
179.3 |
180.1 |
C6 |
C5 |
C4 |
C3 |
0.0 |
359.9 |
C4 |
C3 |
C2 |
N7 |
180.5 |
180.0 |
C2 |
C3 |
C4 |
HC3 |
180.0 |
179.7 |
C5 |
C4 |
C3 |
HC4 |
180.0 |
180.1 |
C3 |
C4 |
C5 |
S5 |
179.3 |
180.0 |
HC3 |
C3 |
C2 |
N7 |
0.5 |
359.7 |
C2 |
C3 |
HC3 |
C4 |
180.0 |
180.3 |
HC3 |
C3 |
C4 |
C5 |
179.8 |
180.1 |
HC3 |
C3 |
C4 |
HC4 |
359.8 |
360.0 |
C4 |
C5 |
C6 |
HC6 |
180.2 |
180.1 |
C6 |
C5 |
C4 |
S5 |
180.7 |
180.0 |
C5 |
C4 |
C3 |
HC3 |
179.8 |
180.1 |
C3 |
C4 |
C5 |
HC4 |
180.0 |
179.9 |
C4 |
C5 |
S5 |
HS5 |
0.7 |
270.0 |
HC4 |
C4 |
C3 |
HC3 |
359.8 |
360.0 |
C3 |
C4 |
HC4 |
C5 |
180.0 |
180.1 |
HC4 |
C4 |
C5 |
S5 |
359.3 |
0.1 |
S5 |
C5 |
C6 |
HC6 |
0.9 |
0.0 |
C6 |
C5 |
S5 |
C4 |
179.3 |
180.0 |
S5 |
C5 |
C4 |
HC4 |
359.3 |
0.1 |
C1 |
C10 |
O12 |
O11 |
179.3 |
180.1 |
C1 |
C10 |
O11 |
O12 |
180.8 |
179.9 |
O11 |
C10 |
O12 |
H12 |
0.7 |
360.0 |
H12 |
O12 |
C10 |
O11 |
0.7 |
360.0 |
C2 |
N7 |
O9 |
O8 |
180.6 |
179.9 |
C2 |
N7 |
O8 |
O9 |
179.4 |
180.1 |