PDB Chemical Component MN7
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MN7
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C |
1.402 |
1.477 |
C1 |
C2 |
1.399 |
1.396 |
C1 |
C6 |
1.400 |
1.395 |
C |
O |
1.214 |
1.215 |
C |
OXT |
1.310 |
1.347 |
OXT |
HXT |
0.950 |
0.966 |
C2 |
C3 |
1.401 |
1.379 |
C2 |
H20 |
1.080 |
1.079 |
C3 |
C4 |
1.400 |
1.383 |
C3 |
H3 |
1.080 |
1.081 |
C4 |
C5 |
1.399 |
1.383 |
C4 |
C7 |
1.511 |
1.507 |
C5 |
C6 |
1.399 |
1.379 |
C5 |
H5 |
1.080 |
1.080 |
C6 |
H6 |
1.080 |
1.079 |
C7 |
N |
1.489 |
1.469 |
C7 |
H71 |
1.080 |
1.090 |
C7 |
H72 |
1.080 |
1.090 |
N |
C9 |
1.499 |
1.469 |
N |
H |
1.020 |
1.008 |
C9 |
C10 |
1.537 |
1.529 |
C9 |
H91 |
1.079 |
1.090 |
C9 |
H92 |
1.080 |
1.091 |
C10 |
C11 |
1.530 |
1.530 |
C10 |
C12 |
1.534 |
1.530 |
C10 |
H10 |
1.080 |
1.090 |
C11 |
H111 |
1.080 |
1.090 |
C11 |
H112 |
1.081 |
1.090 |
C11 |
H113 |
1.080 |
1.088 |
C12 |
H121 |
1.080 |
1.090 |
C12 |
H122 |
1.080 |
1.090 |
C12 |
H123 |
1.079 |
1.090 |
Bond Angles for MN7
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C |
C1 |
C2 |
120.2 |
120.1 |
C |
C1 |
C6 |
119.8 |
120.2 |
C1 |
C |
O |
115.3 |
120.0 |
C1 |
C |
OXT |
120.4 |
120.0 |
C2 |
C1 |
C6 |
120.0 |
119.7 |
C1 |
C2 |
C3 |
120.0 |
119.8 |
C1 |
C2 |
H20 |
120.0 |
120.1 |
C1 |
C6 |
C5 |
120.1 |
119.9 |
C1 |
C6 |
H6 |
120.0 |
120.1 |
O |
C |
OXT |
124.4 |
119.9 |
C |
OXT |
HXT |
120.3 |
120.0 |
C3 |
C2 |
H20 |
120.0 |
120.1 |
C2 |
C3 |
C4 |
119.9 |
120.2 |
C2 |
C3 |
H3 |
120.0 |
119.9 |
C4 |
C3 |
H3 |
120.0 |
119.9 |
C3 |
C4 |
C5 |
120.1 |
120.3 |
C3 |
C4 |
C7 |
120.1 |
119.8 |
C5 |
C4 |
C7 |
119.8 |
119.9 |
C4 |
C5 |
C6 |
119.9 |
120.2 |
C4 |
C5 |
H5 |
120.0 |
119.9 |
C4 |
C7 |
N |
109.7 |
109.5 |
C4 |
C7 |
H71 |
109.4 |
109.5 |
C4 |
C7 |
H72 |
109.3 |
109.5 |
C6 |
C5 |
H5 |
120.0 |
120.0 |
C5 |
C6 |
H6 |
120.0 |
120.1 |
N |
C7 |
H71 |
109.5 |
109.5 |
N |
C7 |
H72 |
109.4 |
109.5 |
C7 |
N |
C9 |
119.5 |
106.7 |
C7 |
N |
H |
108.6 |
106.7 |
H71 |
C7 |
H72 |
109.5 |
109.5 |
C9 |
N |
H |
108.7 |
106.7 |
N |
C9 |
C10 |
110.4 |
109.5 |
N |
C9 |
H91 |
109.9 |
109.5 |
N |
C9 |
H92 |
109.1 |
109.5 |
C10 |
C9 |
H91 |
109.3 |
109.5 |
C10 |
C9 |
H92 |
109.1 |
109.4 |
C9 |
C10 |
C11 |
109.3 |
109.5 |
C9 |
C10 |
C12 |
110.4 |
109.4 |
C9 |
C10 |
H10 |
109.2 |
109.5 |
H91 |
C9 |
H92 |
109.1 |
109.4 |
C11 |
C10 |
C12 |
109.1 |
109.4 |
C11 |
C10 |
H10 |
109.3 |
109.6 |
C10 |
C11 |
H111 |
109.5 |
109.5 |
C10 |
C11 |
H112 |
109.4 |
109.4 |
C10 |
C11 |
H113 |
109.5 |
109.5 |
C12 |
C10 |
H10 |
109.5 |
109.4 |
C10 |
C12 |
H121 |
109.5 |
109.5 |
C10 |
C12 |
H122 |
109.5 |
109.5 |
C10 |
C12 |
H123 |
109.5 |
109.5 |
H111 |
C11 |
H112 |
109.4 |
109.4 |
H111 |
C11 |
H113 |
109.5 |
109.6 |
H112 |
C11 |
H113 |
109.5 |
109.5 |
H121 |
C12 |
H122 |
109.4 |
109.4 |
H121 |
C12 |
H123 |
109.5 |
109.5 |
H122 |
C12 |
H123 |
109.4 |
109.5 |
Torsion Angles for MN7
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C |
C6 |
179.6 |
179.9 |
C |
C1 |
C2 |
C3 |
180.4 |
180.0 |
C |
C1 |
C2 |
H20 |
0.5 |
0.0 |
C |
C1 |
C6 |
C5 |
179.6 |
179.8 |
C |
C1 |
C6 |
H6 |
359.5 |
359.9 |
O |
C |
C1 |
OXT |
179.8 |
179.9 |
C1 |
C |
OXT |
HXT |
180.0 |
180.0 |
C |
C1 |
C2 |
C6 |
180.4 |
180.1 |
C2 |
C1 |
C |
O |
275.0 |
360.0 |
C2 |
C1 |
C |
OXT |
95.2 |
180.0 |
C2 |
C1 |
C6 |
C5 |
0.0 |
359.8 |
C2 |
C1 |
C6 |
H6 |
179.9 |
180.0 |
C3 |
C2 |
C1 |
H20 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
C4 |
0.0 |
0.0 |
C1 |
C2 |
C3 |
H3 |
180.1 |
180.0 |
C |
C1 |
C6 |
C2 |
179.6 |
179.9 |
C6 |
C1 |
C |
O |
95.4 |
180.0 |
C6 |
C1 |
C |
OXT |
275.6 |
0.1 |
C6 |
C1 |
C2 |
C3 |
0.0 |
360.0 |
C6 |
C1 |
C2 |
H20 |
180.1 |
180.0 |
C4 |
C5 |
C6 |
C1 |
359.9 |
0.4 |
C1 |
C6 |
C5 |
H5 |
179.9 |
180.0 |
C5 |
C6 |
C1 |
H6 |
180.1 |
179.8 |
O |
C |
C1 |
C2 |
275.0 |
360.0 |
O |
C |
C1 |
C6 |
95.4 |
180.0 |
C1 |
C |
O |
OXT |
180.2 |
180.1 |
O |
C |
OXT |
HXT |
0.2 |
0.1 |
OXT |
C |
C1 |
C2 |
95.2 |
180.0 |
OXT |
C |
C1 |
C6 |
275.6 |
0.1 |
C1 |
C |
OXT |
O |
179.8 |
179.9 |
C3 |
C2 |
C1 |
C6 |
0.0 |
360.0 |
C1 |
C2 |
C3 |
H20 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
H3 |
179.9 |
180.0 |
C2 |
C3 |
C4 |
C5 |
359.9 |
0.2 |
C2 |
C3 |
C4 |
C7 |
179.7 |
180.0 |
H20 |
C2 |
C1 |
C6 |
180.1 |
180.0 |
C1 |
C2 |
H20 |
C3 |
180.0 |
180.0 |
H20 |
C2 |
C3 |
C4 |
180.0 |
180.0 |
H20 |
C2 |
C3 |
H3 |
0.0 |
360.0 |
C4 |
C3 |
C2 |
H20 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
H3 |
180.1 |
180.0 |
C5 |
C4 |
C3 |
C7 |
180.2 |
180.3 |
C3 |
C4 |
C5 |
C6 |
0.1 |
359.5 |
C3 |
C4 |
C5 |
H5 |
180.1 |
179.9 |
C3 |
C4 |
C7 |
N |
47.7 |
90.0 |
C3 |
C4 |
C7 |
H71 |
287.6 |
330.0 |
C3 |
C4 |
C7 |
H72 |
167.7 |
210.0 |
H3 |
C3 |
C2 |
H20 |
0.0 |
360.0 |
C2 |
C3 |
H3 |
C4 |
179.9 |
180.0 |
H3 |
C3 |
C4 |
C5 |
179.9 |
180.2 |
H3 |
C3 |
C4 |
C7 |
359.6 |
360.0 |
C1 |
C6 |
C5 |
C4 |
359.9 |
0.4 |
C5 |
C4 |
C3 |
H3 |
179.9 |
180.2 |
C3 |
C4 |
C5 |
C7 |
179.8 |
179.7 |
C5 |
C4 |
C7 |
N |
227.5 |
269.7 |
C5 |
C4 |
C7 |
H71 |
107.4 |
149.8 |
C5 |
C4 |
C7 |
H72 |
347.5 |
29.7 |
C6 |
C5 |
C4 |
H5 |
180.0 |
179.6 |
C4 |
C5 |
C6 |
H6 |
180.1 |
180.3 |
C7 |
C4 |
C3 |
H3 |
359.6 |
360.0 |
C3 |
C4 |
C7 |
C5 |
180.2 |
180.3 |
C7 |
C4 |
C5 |
C6 |
180.3 |
179.8 |
C7 |
C4 |
C5 |
H5 |
0.3 |
0.2 |
N |
C7 |
C4 |
H71 |
120.1 |
120.0 |
N |
C7 |
C4 |
H72 |
240.0 |
240.0 |
C4 |
C7 |
N |
C9 |
90.4 |
180.0 |
C4 |
C7 |
N |
H |
325.1 |
66.2 |
H71 |
C7 |
C4 |
H72 |
119.9 |
120.0 |
C1 |
C6 |
C5 |
H6 |
179.9 |
180.2 |
C6 |
C5 |
C4 |
C7 |
180.3 |
179.8 |
C4 |
C5 |
C6 |
H5 |
180.0 |
180.4 |
H5 |
C5 |
C4 |
C7 |
0.3 |
0.2 |
C4 |
C5 |
H5 |
C6 |
180.0 |
179.6 |
H5 |
C5 |
C6 |
H6 |
0.0 |
359.9 |
C1 |
C6 |
H6 |
C5 |
180.1 |
179.8 |
H6 |
C6 |
C5 |
H5 |
0.0 |
359.9 |
C4 |
C7 |
N |
H71 |
239.9 |
240.0 |
C4 |
C7 |
N |
H72 |
119.9 |
120.0 |
H71 |
C7 |
N |
H72 |
240.0 |
239.9 |
C9 |
N |
C7 |
H |
125.3 |
113.7 |
C7 |
N |
C9 |
C10 |
73.2 |
180.0 |
C7 |
N |
C9 |
H91 |
193.8 |
60.0 |
C7 |
N |
C9 |
H92 |
313.4 |
300.0 |
C4 |
C7 |
H71 |
N |
120.3 |
120.0 |
C4 |
C7 |
H71 |
H72 |
240.2 |
240.0 |
N |
C7 |
H71 |
H72 |
119.9 |
120.0 |
H71 |
C7 |
N |
C9 |
210.5 |
300.0 |
H71 |
C7 |
N |
H |
85.2 |
186.2 |
C4 |
C7 |
H72 |
N |
239.8 |
240.0 |
C4 |
C7 |
H72 |
H71 |
119.9 |
120.0 |
N |
C7 |
H72 |
H71 |
240.0 |
240.0 |
H72 |
C7 |
N |
C9 |
330.4 |
60.0 |
H72 |
C7 |
N |
H |
205.1 |
306.3 |
C9 |
N |
C7 |
H71 |
210.5 |
300.0 |
C9 |
N |
C7 |
H72 |
330.4 |
60.0 |
C7 |
N |
C9 |
H |
234.8 |
246.2 |
C10 |
C9 |
N |
H91 |
239.4 |
120.1 |
C10 |
C9 |
N |
H92 |
119.8 |
240.0 |
N |
C9 |
C10 |
C11 |
247.6 |
180.1 |
N |
C9 |
C10 |
C12 |
7.6 |
300.0 |
N |
C9 |
C10 |
H10 |
128.1 |
59.9 |
H91 |
C9 |
N |
H92 |
240.5 |
119.9 |
H |
N |
C7 |
H71 |
85.2 |
186.2 |
H |
N |
C7 |
H72 |
205.1 |
306.3 |
C7 |
N |
H |
C9 |
131.4 |
113.8 |
H |
N |
C9 |
C10 |
198.4 |
293.8 |
H |
N |
C9 |
H91 |
319.1 |
173.7 |
H |
N |
C9 |
H92 |
78.6 |
53.8 |
C10 |
C9 |
N |
H |
198.4 |
293.8 |
N |
C9 |
C10 |
H91 |
121.0 |
240.0 |
N |
C9 |
C10 |
H92 |
240.2 |
120.0 |
H91 |
C9 |
C10 |
H92 |
119.2 |
240.0 |
C11 |
C10 |
C9 |
C12 |
240.0 |
240.1 |
C11 |
C10 |
C9 |
H10 |
119.5 |
120.1 |
C9 |
C10 |
C11 |
H111 |
288.4 |
180.1 |
C9 |
C10 |
C11 |
H112 |
168.4 |
299.9 |
C9 |
C10 |
C11 |
H113 |
48.4 |
59.9 |
C12 |
C10 |
C9 |
H10 |
239.5 |
240.1 |
C9 |
C10 |
C12 |
H121 |
276.4 |
300.0 |
C9 |
C10 |
C12 |
H122 |
156.4 |
59.9 |
C9 |
C10 |
C12 |
H123 |
36.4 |
180.0 |
H91 |
C9 |
N |
H |
319.1 |
173.7 |
N |
C9 |
H91 |
C10 |
238.7 |
120.1 |
N |
C9 |
H91 |
H92 |
119.6 |
240.0 |
C10 |
C9 |
H91 |
H92 |
240.8 |
120.0 |
H91 |
C9 |
C10 |
C11 |
126.7 |
300.1 |
H91 |
C9 |
C10 |
C12 |
246.7 |
60.0 |
H91 |
C9 |
C10 |
H10 |
7.2 |
180.0 |
H92 |
C9 |
N |
H |
78.6 |
53.8 |
N |
C9 |
H92 |
C10 |
120.6 |
240.0 |
N |
C9 |
H92 |
H91 |
240.0 |
120.0 |
C10 |
C9 |
H92 |
H91 |
119.3 |
240.0 |
H92 |
C9 |
C10 |
C11 |
7.5 |
60.1 |
H92 |
C9 |
C10 |
C12 |
127.5 |
180.0 |
H92 |
C9 |
C10 |
H10 |
248.0 |
299.9 |
C11 |
C10 |
C9 |
H91 |
126.7 |
300.1 |
C11 |
C10 |
C9 |
H92 |
7.5 |
60.1 |
C9 |
C10 |
C11 |
C12 |
120.8 |
119.9 |
C9 |
C10 |
C11 |
H10 |
240.5 |
239.9 |
C12 |
C10 |
C11 |
H10 |
119.7 |
120.0 |
C11 |
C10 |
C12 |
H121 |
36.5 |
60.0 |
C11 |
C10 |
C12 |
H122 |
276.5 |
179.9 |
C11 |
C10 |
C12 |
H123 |
156.5 |
300.0 |
H111 |
C11 |
C10 |
H112 |
119.9 |
240.2 |
H111 |
C11 |
C10 |
H113 |
239.9 |
120.2 |
H112 |
C11 |
C10 |
H113 |
120.0 |
240.0 |
C12 |
C10 |
C9 |
H91 |
246.7 |
60.0 |
C12 |
C10 |
C9 |
H92 |
127.5 |
180.0 |
C9 |
C10 |
C12 |
C11 |
239.9 |
240.0 |
C9 |
C10 |
C12 |
H10 |
120.3 |
120.0 |
C11 |
C10 |
C12 |
H10 |
240.4 |
239.9 |
C12 |
C10 |
C11 |
H111 |
167.6 |
60.1 |
C12 |
C10 |
C11 |
H112 |
47.6 |
179.9 |
C12 |
C10 |
C11 |
H113 |
287.6 |
300.0 |
H121 |
C12 |
C10 |
H122 |
120.0 |
240.1 |
H121 |
C12 |
C10 |
H123 |
240.0 |
120.0 |
H122 |
C12 |
C10 |
H123 |
120.0 |
240.0 |
H10 |
C10 |
C9 |
H91 |
7.2 |
180.0 |
H10 |
C10 |
C9 |
H92 |
248.0 |
299.9 |
C9 |
C10 |
H10 |
C11 |
119.5 |
120.1 |
C9 |
C10 |
H10 |
C12 |
239.0 |
240.1 |
C11 |
C10 |
H10 |
C12 |
119.4 |
120.0 |
H10 |
C10 |
C11 |
H111 |
47.9 |
300.1 |
H10 |
C10 |
C11 |
H112 |
287.9 |
60.0 |
H10 |
C10 |
C11 |
H113 |
167.9 |
180.0 |
H10 |
C10 |
C12 |
H121 |
156.1 |
180.0 |
H10 |
C10 |
C12 |
H122 |
36.1 |
300.0 |
H10 |
C10 |
C12 |
H123 |
276.1 |
60.0 |
H111 |
C11 |
C10 |
C12 |
167.6 |
60.1 |
H111 |
C11 |
C10 |
H10 |
47.9 |
300.1 |
C10 |
C11 |
H111 |
H112 |
240.1 |
119.8 |
C10 |
C11 |
H111 |
H113 |
120.1 |
239.8 |
H112 |
C11 |
H111 |
H113 |
240.0 |
120.0 |
H112 |
C11 |
C10 |
C12 |
47.6 |
179.9 |
H112 |
C11 |
C10 |
H10 |
287.9 |
60.0 |
C10 |
C11 |
H112 |
H111 |
120.0 |
240.1 |
C10 |
C11 |
H112 |
H113 |
240.0 |
120.1 |
H111 |
C11 |
H112 |
H113 |
120.0 |
239.9 |
H113 |
C11 |
C10 |
C12 |
287.6 |
300.0 |
H113 |
C11 |
C10 |
H10 |
167.9 |
180.0 |
C10 |
C11 |
H113 |
H111 |
239.9 |
120.1 |
C10 |
C11 |
H113 |
H112 |
120.0 |
240.0 |
H111 |
C11 |
H113 |
H112 |
240.0 |
119.9 |
H121 |
C12 |
C10 |
H10 |
156.1 |
180.0 |
C10 |
C12 |
H121 |
H122 |
240.0 |
120.0 |
C10 |
C12 |
H121 |
H123 |
120.0 |
240.0 |
H122 |
C12 |
H121 |
H123 |
240.0 |
120.0 |
H122 |
C12 |
C10 |
H10 |
36.1 |
300.0 |
C10 |
C12 |
H122 |
H121 |
120.0 |
240.0 |
C10 |
C12 |
H122 |
H123 |
240.0 |
120.0 |
H121 |
C12 |
H122 |
H123 |
120.0 |
240.0 |
H123 |
C12 |
C10 |
H10 |
276.1 |
60.0 |
C10 |
C12 |
H123 |
H121 |
240.0 |
120.0 |
C10 |
C12 |
H123 |
H122 |
120.0 |
240.0 |
H121 |
C12 |
H123 |
H122 |
240.0 |
120.0 |