PDB Chemical Component MLZ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MLZ

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N CA 1.459 1.440
N H 1.019 1.006
N H2 1.020 1.007
CA CB 1.536 1.530
CA C 1.524 1.516
CA HA 1.114 1.094
CB CG 1.523 1.534
CB HB2 1.115 1.099
CB HB3 1.116 1.098
CG CD 1.525 1.533
CG HG2 1.116 1.097
CG HG3 1.115 1.096
CD CE 1.536 1.530
CD HD2 1.114 1.096
CD HD3 1.115 1.097
CE NZ 1.491 1.458
CE HE2 1.115 1.095
CE HE3 1.115 1.096
NZ CM   1.456
NZ HZ 1.019 1.020
CM HCM1   1.093
CM HCM2   1.094
CM HCM3   1.094
C O 1.233 1.224
C OXT 1.327 1.359
OXT HXT 0.951 0.981

Bond Angles for MLZ

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CA N H 109.8 119.1
CA N H2 112.1 119.1
N CA CB 109.8 112.5
N CA C 116.3 106.5
N CA HA 104.5 106.2
H N H2 112.2 120.4
CB CA C 109.7 110.2
CB CA HA 111.8 112.3
CA CB CG 115.2 114.7
CA CB HB2 110.2 109.4
CA CB HB3 110.1 109.5
C CA HA 104.6 109.0
CA C O 120.5 125.3
CA C OXT 116.5 111.9
CG CB HB2 110.1 108.0
CG CB HB3 110.1 109.0
CB CG CD 112.6 113.3
CB CG HG2 111.0 107.9
CB CG HG3 111.0 109.6
HB2 CB HB3 100.1 105.9
CD CG HG2 111.1 109.0
CD CG HG3 111.1 110.3
CG CD CE 111.3 112.9
CG CD HD2 111.5 110.2
CG CD HD3 111.5 109.2
HG2 CG HG3 99.3 106.6
CE CD HD2 111.5 109.2
CE CD HD3 111.5 108.3
CD CE NZ 112.4 111.9
CD CE HE2 111.1 110.0
CD CE HE3 111.1 109.2
HD2 CD HD3 98.9 106.8
NZ CE HE2 111.1 109.2
NZ CE HE3 111.2 109.0
CE NZ CM   110.9
CE NZ HZ 162.2 109.1
HE2 CE HE3 99.2 107.4
CM NZ HZ   109.2
NZ CM HCM1   110.1
NZ CM HCM2   110.2
NZ CM HCM3   110.2
HCM1 CM HCM2   108.8
HCM1 CM HCM3   108.8
HCM2 CM HCM3   108.7
O C OXT 123.0 122.8
C OXT HXT 116.5 115.3

Torsion Angles for MLZ

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H N CA H2 125.4 166.6
CB CA N C 234.8 239.2
CB CA N HA 120.0 123.2
N CA CB CG 269.4 297.1
N CA CB HB2 34.7 58.6
N CA CB HB3 144.1 174.3
C CA N HA 245.3 243.9
N CA C O 149.2 324.3
N CA C OXT 329.5 146.6
CA N H H2 234.7 193.6
H N CA CB 180.0 167.1
H N CA C 305.3 287.9
H N CA HA 60.0 43.9
CA N H2 H 124.0 166.4
H2 N CA CB 54.7 0.5
H2 N CA C 179.9 121.2
H2 N CA HA 294.7 237.3
CB CA N H 180.0 167.1
CB CA N H2 54.7 0.5
N CA CB C 128.9 118.6
N CA CB HA 244.5 240.3
C CA CB HA 115.5 121.7
CB CA C O 274.5 86.5
CB CA C OXT 94.8 268.8
CG CB CA HB2 234.7 238.5
CG CB CA HB3 125.3 122.8
CA CB CG CD 49.3 182.3
CA CB CG HG2 174.5 61.6
CA CB CG HG3 283.9 305.9
HB2 CB CA HB3 250.6 244.4
C CA N H 305.3 287.9
C CA N H2 179.9 121.2
N CA C CB 234.7 237.8
N CA C HA 114.7 114.2
CB CA C HA 240.0 236.4
C CA CB CG 140.5 178.5
C CA CB HB2 265.7 300.0
C CA CB HB3 15.2 55.7
O C CA OXT 179.7 177.7
CA C OXT HXT 180.1 177.7
HA CA N H 60.0 43.9
HA CA N H2 294.7 237.3
N CA HA CB 118.7 123.3
N CA HA C 237.3 245.6
CB CA HA C 118.6 122.4
HA CA CB CG 24.9 56.8
HA CA CB HB2 150.2 178.3
HA CA CB HB3 259.6 294.0
HA CA C O 34.5 210.1
HA CA C OXT 214.8 32.4
CG CB CA C 140.5 178.5
CG CB CA HA 24.9 56.8
CA CB CG HB2 125.3 122.3
CA CB CG HB3 234.7 236.9
HB2 CB CG HB3 109.4 114.6
CD CG CB HG2 234.7 120.7
CD CG CB HG3 125.3 236.4
CB CG CD CE 176.3 182.4
CB CG CD HD2 301.5 60.0
CB CG CD HD3 51.0 303.0
HG2 CG CB HG3 250.6 115.7
HB2 CB CA C 265.7 300.0
HB2 CB CA HA 150.2 178.3
CA CB HB2 CG 231.9 234.5
CA CB HB2 HB3 115.9 117.9
CG CB HB2 HB3 244.1 243.4
HB2 CB CG CD 284.0 60.0
HB2 CB CG HG2 49.2 299.3
HB2 CB CG HG3 158.6 183.6
HB3 CB CA C 15.2 55.7
HB3 CB CA HA 259.6 294.0
CA CB HB3 CG 128.2 126.2
CA CB HB3 HB2 244.0 242.2
CG CB HB3 HB2 115.9 116.0
HB3 CB CG CD 174.5 305.4
HB3 CB CG HG2 299.8 184.7
HB3 CB CG HG3 49.2 69.0
CD CG CB HB2 284.0 60.0
CD CG CB HB3 174.5 305.4
CB CG CD HG2 125.2 239.9
CB CG CD HG3 234.7 123.3
HG2 CG CD HG3 109.5 243.4
CE CD CG HD2 234.7 122.5
CE CD CG HD3 125.3 239.4
CG CD CE NZ 161.9 178.3
CG CD CE HE2 287.2 299.9
CG CD CE HE3 36.6 57.6
HD2 CD CG HD3 250.5 117.0
HG2 CG CB HB2 49.2 299.3
HG2 CG CB HB3 299.8 184.7
CB CG HG2 CD 233.9 123.4
CB CG HG2 HG3 116.9 242.3
CD CG HG2 HG3 243.0 119.0
HG2 CG CD CE 51.0 302.5
HG2 CG CD HD2 176.3 180.1
HG2 CG CD HD3 285.8 63.1
HG3 CG CB HB2 158.6 183.6
HG3 CG CB HB3 49.2 69.0
CB CG HG3 CD 126.2 234.6
CB CG HG3 HG2 243.1 116.5
CD CG HG3 HG2 117.0 241.9
HG3 CG CD CE 301.6 59.2
HG3 CG CD HD2 66.8 296.7
HG3 CG CD HD3 176.3 179.7
CE CD CG HG2 51.0 302.5
CE CD CG HG3 301.6 59.2
CG CD CE HD2 125.2 237.0
CG CD CE HD3 234.8 121.1
HD2 CD CE HD3 109.5 244.0
NZ CE CD HE2 234.7 238.4
NZ CE CD HE3 125.3 120.7
CD CE NZ CM   182.1
CD CE NZ HZ 225.7 61.7
HE2 CE CD HE3 250.6 242.3
HD2 CD CG HG2 176.3 180.1
HD2 CD CG HG3 66.8 296.7
CG CD HD2 CE 234.9 124.6
CG CD HD2 HD3 117.4 241.6
CE CD HD2 HD3 242.5 117.0
HD2 CD CE NZ 36.7 301.3
HD2 CD CE HE2 162.0 62.9
HD2 CD CE HE3 271.4 180.6
HD3 CD CG HG2 285.8 63.1
HD3 CD CG HG3 176.3 179.7
CG CD HD3 CE 125.1 236.6
CG CD HD3 HD2 242.6 119.1
CE CD HD3 HD2 117.5 242.4
HD3 CD CE NZ 287.2 57.3
HD3 CD CE HE2 52.4 178.9
HD3 CD CE HE3 161.9 296.5
NZ CE CD HD2 36.7 301.3
NZ CE CD HD3 287.2 57.3
CD CE NZ HE2 125.3 122.1
CD CE NZ HE3 234.7 239.1
HE2 CE NZ HE3 109.5 117.1
CM NZ CE HZ   120.4
CE NZ CM HCM1   259.4
CE NZ CM HCM2   139.3
CE NZ CM HCM3   19.4
HE2 CE CD HD2 162.0 62.9
HE2 CE CD HD3 52.4 178.9
CD CE HE2 NZ 234.0 236.8
CD CE HE2 HE3 117.0 118.7
NZ CE HE2 HE3 243.0 242.0
HE2 CE NZ CM   60.0
HE2 CE NZ HZ 100.4 299.6
HE3 CE CD HD2 271.4 180.6
HE3 CE CD HD3 161.9 296.5
CD CE HE3 NZ 126.0 122.5
CD CE HE3 HE2 243.0 240.7
NZ CE HE3 HE2 117.0 118.2
HE3 CE NZ CM   302.9
HE3 CE NZ HZ 351.0 182.5
CM NZ CE HE2   60.0
CM NZ CE HE3   302.9
CE NZ CM HZ   239.7
HCM1 CM NZ HCM2   120.1
HCM1 CM NZ HCM3   240.0
HCM2 CM NZ HCM3   119.9
HZ NZ CE HE2 100.4 299.6
HZ NZ CE HE3 351.0 182.5
CE NZ HZ CM   121.4
HZ NZ CM HCM1   19.7
HZ NZ CM HCM2   259.7
HZ NZ CM HCM3   139.8
HCM1 CM NZ HZ   19.7
NZ CM HCM1 HCM2   239.1
NZ CM HCM1 HCM3   120.9
HCM2 CM HCM1 HCM3   241.8
HCM2 CM NZ HZ   259.7
NZ CM HCM2 HCM1   120.9
NZ CM HCM2 HCM3   239.2
HCM1 CM HCM2 HCM3   118.3
HCM3 CM NZ HZ   139.8
NZ CM HCM3 HCM1   239.1
NZ CM HCM3 HCM2   120.8
HCM1 CM HCM3 HCM2   241.7
O C CA HA 34.5 210.1
CA C O OXT 180.3 182.6
O C OXT HXT 0.4 359.9
OXT C CA HA 214.8 32.4
CA C OXT O 179.7 177.7