PDB Chemical Component MLU
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for MLU
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CN |
1.514 |
1.469 |
| N |
CA |
1.480 |
1.469 |
| CA |
C |
1.520 |
1.507 |
| CA |
CB |
1.541 |
1.530 |
| C |
O |
1.223 |
1.208 |
| C |
OXT |
1.330 |
1.342 |
| CB |
CG |
1.491 |
1.529 |
| CG |
CD1 |
1.488 |
1.531 |
| CG |
CD2 |
1.415 |
1.530 |
| N |
H |
1.000 |
1.008 |
| CN |
HCN1 |
1.100 |
1.090 |
| CN |
HCN2 |
1.099 |
1.090 |
| CN |
HCN3 |
1.100 |
1.090 |
| CA |
HA |
1.100 |
1.091 |
| CB |
HB2 |
1.101 |
1.090 |
| CB |
HB3 |
1.100 |
1.090 |
| OXT |
HXT |
0.950 |
0.966 |
| CG |
HG |
1.100 |
1.090 |
| CD1 |
HD11 |
1.099 |
1.090 |
| CD1 |
HD12 |
1.100 |
1.091 |
| CD1 |
HD13 |
1.100 |
1.090 |
| CD2 |
HD21 |
1.100 |
1.090 |
| CD2 |
HD22 |
1.100 |
1.090 |
| CD2 |
HD23 |
1.100 |
1.090 |
Bond Angles for MLU
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CN |
N |
CA |
111.9 |
111.0 |
| CN |
N |
H |
108.9 |
111.0 |
| N |
CN |
HCN1 |
109.5 |
109.5 |
| N |
CN |
HCN2 |
109.5 |
109.5 |
| N |
CN |
HCN3 |
109.4 |
109.5 |
| N |
CA |
C |
106.3 |
109.5 |
| N |
CA |
CB |
104.1 |
109.5 |
| CA |
N |
H |
108.8 |
111.0 |
| N |
CA |
HA |
113.2 |
109.4 |
| C |
CA |
CB |
107.7 |
109.5 |
| CA |
C |
O |
118.3 |
120.0 |
| CA |
C |
OXT |
116.6 |
120.0 |
| C |
CA |
HA |
112.6 |
109.4 |
| CA |
CB |
CG |
117.7 |
109.5 |
| CB |
CA |
HA |
112.3 |
109.5 |
| CA |
CB |
HB2 |
107.4 |
109.5 |
| CA |
CB |
HB3 |
107.4 |
109.4 |
| O |
C |
OXT |
125.1 |
119.9 |
| C |
OXT |
HXT |
109.5 |
117.0 |
| CB |
CG |
CD1 |
112.6 |
109.4 |
| CB |
CG |
CD2 |
111.0 |
109.5 |
| CG |
CB |
HB2 |
107.4 |
109.5 |
| CG |
CB |
HB3 |
107.4 |
109.5 |
| CB |
CG |
HG |
108.4 |
109.5 |
| CD1 |
CG |
CD2 |
107.1 |
109.5 |
| CD1 |
CG |
HG |
108.4 |
109.4 |
| CG |
CD1 |
HD11 |
109.5 |
109.4 |
| CG |
CD1 |
HD12 |
109.4 |
109.4 |
| CG |
CD1 |
HD13 |
109.4 |
109.5 |
| CD2 |
CG |
HG |
109.4 |
109.5 |
| CG |
CD2 |
HD21 |
109.5 |
109.5 |
| CG |
CD2 |
HD22 |
109.5 |
109.4 |
| CG |
CD2 |
HD23 |
109.4 |
109.5 |
| HCN1 |
CN |
HCN2 |
109.5 |
109.4 |
| HCN1 |
CN |
HCN3 |
109.5 |
109.5 |
| HCN2 |
CN |
HCN3 |
109.5 |
109.5 |
| HB2 |
CB |
HB3 |
109.5 |
109.5 |
| HD11 |
CD1 |
HD12 |
109.5 |
109.5 |
| HD11 |
CD1 |
HD13 |
109.5 |
109.5 |
| HD12 |
CD1 |
HD13 |
109.5 |
109.5 |
| HD21 |
CD2 |
HD22 |
109.4 |
109.5 |
| HD21 |
CD2 |
HD23 |
109.5 |
109.5 |
| HD22 |
CD2 |
HD23 |
109.5 |
109.5 |
Torsion Angles for MLU
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CN |
N |
CA |
C |
60.3 |
84.2 |
| CN |
N |
CA |
CB |
173.9 |
204.3 |
| CA |
N |
CN |
H |
239.7 |
236.0 |
| CN |
N |
CA |
HA |
296.1 |
324.3 |
| HCN1 |
CN |
N |
HCN2 |
240.0 |
240.0 |
| HCN1 |
CN |
N |
HCN3 |
120.0 |
120.0 |
| HCN2 |
CN |
N |
HCN3 |
240.0 |
240.0 |
| CN |
N |
CA |
H |
120.4 |
124.0 |
| CA |
N |
CN |
HCN1 |
180.0 |
175.6 |
| CA |
N |
CN |
HCN2 |
300.0 |
295.6 |
| CA |
N |
CN |
HCN3 |
60.0 |
55.6 |
| C |
CA |
N |
CB |
246.4 |
239.9 |
| N |
CA |
C |
O |
57.1 |
26.3 |
| N |
CA |
C |
OXT |
237.5 |
206.2 |
| C |
CA |
N |
HA |
124.2 |
119.9 |
| N |
CA |
CB |
CG |
198.1 |
65.0 |
| CB |
CA |
N |
HA |
237.8 |
240.0 |
| N |
CA |
CB |
HB2 |
319.3 |
185.0 |
| N |
CA |
CB |
HB3 |
76.9 |
305.0 |
| N |
CA |
C |
CB |
111.1 |
120.1 |
| C |
CA |
N |
H |
299.9 |
320.2 |
| N |
CA |
C |
HA |
235.4 |
240.1 |
| C |
CA |
CB |
CG |
310.7 |
185.0 |
| CB |
CA |
C |
HA |
124.3 |
120.0 |
| C |
CA |
CB |
HB2 |
71.9 |
305.0 |
| C |
CA |
CB |
HB3 |
189.6 |
65.0 |
| O |
C |
CA |
OXT |
179.6 |
180.1 |
| CA |
C |
OXT |
HXT |
179.6 |
180.1 |
| N |
CA |
CB |
C |
247.4 |
240.0 |
| CB |
CA |
N |
H |
53.5 |
80.3 |
| N |
CA |
CB |
HA |
122.8 |
120.0 |
| CB |
CA |
C |
O |
306.0 |
266.3 |
| CB |
CA |
C |
OXT |
126.4 |
86.2 |
| C |
CA |
CB |
HA |
235.5 |
240.0 |
| CA |
CB |
CG |
CD1 |
171.9 |
65.0 |
| CA |
CB |
CG |
CD2 |
291.9 |
185.0 |
| CG |
CB |
CA |
HB2 |
238.8 |
240.0 |
| CG |
CB |
CA |
HB3 |
121.2 |
120.0 |
| CA |
CB |
CG |
HG |
52.0 |
305.0 |
| HB2 |
CB |
CA |
HB3 |
242.3 |
240.0 |
| O |
C |
CA |
CB |
306.0 |
266.3 |
| CA |
C |
O |
OXT |
180.4 |
179.9 |
| O |
C |
CA |
HA |
181.7 |
146.2 |
| O |
C |
OXT |
HXT |
360.0 |
360.0 |
| OXT |
C |
CA |
CB |
126.4 |
86.2 |
| CA |
C |
OXT |
O |
179.6 |
180.1 |
| OXT |
C |
CA |
HA |
2.0 |
326.2 |
| CG |
CB |
CA |
HA |
75.3 |
305.0 |
| CA |
CB |
CG |
HB2 |
121.2 |
120.0 |
| CA |
CB |
CG |
HB3 |
238.8 |
240.0 |
| CD1 |
CG |
CB |
CD2 |
240.0 |
240.0 |
| CD1 |
CG |
CB |
HG |
119.9 |
120.0 |
| CB |
CG |
CD1 |
HD11 |
180.0 |
60.0 |
| CB |
CG |
CD1 |
HD12 |
300.0 |
180.0 |
| CB |
CG |
CD1 |
HD13 |
60.0 |
300.0 |
| CD2 |
CG |
CB |
HG |
239.9 |
240.0 |
| CB |
CG |
CD2 |
HD21 |
180.0 |
60.0 |
| CB |
CG |
CD2 |
HD22 |
300.0 |
180.0 |
| CB |
CG |
CD2 |
HD23 |
60.0 |
300.0 |
| HB2 |
CB |
CG |
HB3 |
117.6 |
120.0 |
| CB |
CG |
CD1 |
CD2 |
122.2 |
120.0 |
| CD1 |
CG |
CB |
HB2 |
50.7 |
305.0 |
| CD1 |
CG |
CB |
HB3 |
293.1 |
185.0 |
| CB |
CG |
CD1 |
HG |
240.1 |
240.0 |
| CD2 |
CG |
CD1 |
HG |
117.9 |
120.0 |
| CD1 |
CG |
CD2 |
HD21 |
303.3 |
180.0 |
| CD1 |
CG |
CD2 |
HD22 |
63.3 |
300.0 |
| CD1 |
CG |
CD2 |
HD23 |
183.2 |
60.0 |
| HD11 |
CD1 |
CG |
HD12 |
240.0 |
240.0 |
| HD11 |
CD1 |
CG |
HD13 |
120.0 |
120.0 |
| HD12 |
CD1 |
CG |
HD13 |
240.0 |
239.9 |
| CB |
CG |
CD2 |
CD1 |
236.7 |
240.0 |
| CD2 |
CG |
CB |
HB2 |
170.7 |
65.0 |
| CD2 |
CG |
CB |
HB3 |
53.1 |
305.0 |
| CB |
CG |
CD2 |
HG |
119.5 |
120.0 |
| CD1 |
CG |
CD2 |
HG |
242.8 |
240.0 |
| CD2 |
CG |
CD1 |
HD11 |
57.7 |
300.0 |
| CD2 |
CG |
CD1 |
HD12 |
177.8 |
60.0 |
| CD2 |
CG |
CD1 |
HD13 |
297.7 |
180.0 |
| HD21 |
CD2 |
CG |
HD22 |
240.0 |
240.0 |
| HD21 |
CD2 |
CG |
HD23 |
120.0 |
120.0 |
| HD22 |
CD2 |
CG |
HD23 |
240.0 |
240.0 |
| CN |
N |
H |
CA |
237.8 |
236.0 |
| H |
N |
CN |
HCN1 |
300.3 |
299.6 |
| H |
N |
CN |
HCN2 |
60.3 |
59.5 |
| H |
N |
CN |
HCN3 |
180.4 |
179.6 |
| H |
N |
CA |
C |
299.9 |
320.2 |
| H |
N |
CA |
CB |
53.5 |
80.3 |
| H |
N |
CA |
HA |
175.7 |
200.3 |
| HCN1 |
CN |
N |
CA |
180.0 |
175.6 |
| HCN1 |
CN |
N |
H |
300.3 |
299.6 |
| N |
CN |
HCN1 |
HCN2 |
120.0 |
120.0 |
| N |
CN |
HCN1 |
HCN3 |
240.0 |
240.0 |
| HCN2 |
CN |
HCN1 |
HCN3 |
120.0 |
120.0 |
| HCN2 |
CN |
N |
CA |
300.0 |
295.6 |
| HCN2 |
CN |
N |
H |
60.3 |
59.5 |
| N |
CN |
HCN2 |
HCN1 |
240.0 |
240.0 |
| N |
CN |
HCN2 |
HCN3 |
120.0 |
120.0 |
| HCN1 |
CN |
HCN2 |
HCN3 |
240.0 |
240.0 |
| HCN3 |
CN |
N |
CA |
60.0 |
55.6 |
| HCN3 |
CN |
N |
H |
180.4 |
179.6 |
| N |
CN |
HCN3 |
HCN1 |
120.0 |
120.0 |
| N |
CN |
HCN3 |
HCN2 |
240.0 |
240.0 |
| HCN1 |
CN |
HCN3 |
HCN2 |
120.0 |
120.0 |
| N |
CA |
HA |
C |
120.7 |
119.9 |
| N |
CA |
HA |
CB |
242.5 |
240.0 |
| HA |
CA |
N |
H |
175.7 |
200.3 |
| C |
CA |
HA |
CB |
121.8 |
120.1 |
| HA |
CA |
C |
O |
181.7 |
146.2 |
| HA |
CA |
C |
OXT |
2.0 |
326.2 |
| HA |
CA |
CB |
CG |
75.3 |
305.0 |
| HA |
CA |
CB |
HB2 |
196.4 |
65.0 |
| HA |
CA |
CB |
HB3 |
314.1 |
185.0 |
| CA |
CB |
HB2 |
CG |
232.5 |
240.0 |
| HB2 |
CB |
CA |
HA |
196.4 |
65.0 |
| CA |
CB |
HB2 |
HB3 |
116.3 |
119.9 |
| HB2 |
CB |
CG |
CD1 |
50.7 |
305.0 |
| HB2 |
CB |
CG |
CD2 |
170.7 |
65.0 |
| CG |
CB |
HB2 |
HB3 |
243.8 |
240.0 |
| HB2 |
CB |
CG |
HG |
290.8 |
185.0 |
| CA |
CB |
HB3 |
CG |
127.5 |
120.0 |
| HB3 |
CB |
CA |
HA |
314.1 |
185.0 |
| CA |
CB |
HB3 |
HB2 |
243.7 |
240.0 |
| HB3 |
CB |
CG |
CD1 |
293.1 |
185.0 |
| HB3 |
CB |
CG |
CD2 |
53.1 |
305.0 |
| CG |
CB |
HB3 |
HB2 |
116.2 |
120.0 |
| HB3 |
CB |
CG |
HG |
173.2 |
65.0 |
| CB |
CG |
HG |
CD1 |
122.5 |
120.0 |
| CB |
CG |
HG |
CD2 |
238.9 |
240.0 |
| HG |
CG |
CB |
HB2 |
290.8 |
185.0 |
| HG |
CG |
CB |
HB3 |
173.2 |
65.0 |
| CD1 |
CG |
HG |
CD2 |
116.4 |
120.0 |
| HG |
CG |
CD1 |
HD11 |
299.8 |
180.0 |
| HG |
CG |
CD1 |
HD12 |
59.9 |
300.0 |
| HG |
CG |
CD1 |
HD13 |
179.8 |
60.0 |
| HG |
CG |
CD2 |
HD21 |
60.5 |
300.0 |
| HG |
CG |
CD2 |
HD22 |
180.5 |
60.0 |
| HG |
CG |
CD2 |
HD23 |
300.5 |
180.0 |
| HD11 |
CD1 |
CG |
CD2 |
57.7 |
300.0 |
| HD11 |
CD1 |
CG |
HG |
299.8 |
180.0 |
| CG |
CD1 |
HD11 |
HD12 |
120.0 |
119.9 |
| CG |
CD1 |
HD11 |
HD13 |
240.0 |
240.0 |
| HD12 |
CD1 |
HD11 |
HD13 |
120.0 |
120.0 |
| HD12 |
CD1 |
CG |
CD2 |
177.8 |
60.0 |
| HD12 |
CD1 |
CG |
HG |
59.9 |
300.0 |
| CG |
CD1 |
HD12 |
HD11 |
240.0 |
240.1 |
| CG |
CD1 |
HD12 |
HD13 |
120.0 |
120.1 |
| HD11 |
CD1 |
HD12 |
HD13 |
240.0 |
240.0 |
| HD13 |
CD1 |
CG |
CD2 |
297.7 |
180.0 |
| HD13 |
CD1 |
CG |
HG |
179.8 |
60.0 |
| CG |
CD1 |
HD13 |
HD11 |
120.0 |
120.0 |
| CG |
CD1 |
HD13 |
HD12 |
240.0 |
240.0 |
| HD11 |
CD1 |
HD13 |
HD12 |
120.0 |
120.0 |
| HD21 |
CD2 |
CG |
HG |
60.5 |
300.0 |
| CG |
CD2 |
HD21 |
HD22 |
120.0 |
120.0 |
| CG |
CD2 |
HD21 |
HD23 |
240.0 |
240.0 |
| HD22 |
CD2 |
HD21 |
HD23 |
120.0 |
120.0 |
| HD22 |
CD2 |
CG |
HG |
180.5 |
60.0 |
| CG |
CD2 |
HD22 |
HD21 |
240.0 |
240.0 |
| CG |
CD2 |
HD22 |
HD23 |
120.0 |
120.0 |
| HD21 |
CD2 |
HD22 |
HD23 |
240.0 |
240.0 |
| HD23 |
CD2 |
CG |
HG |
300.5 |
180.0 |
| CG |
CD2 |
HD23 |
HD21 |
120.0 |
120.0 |
| CG |
CD2 |
HD23 |
HD22 |
240.0 |
240.0 |
| HD21 |
CD2 |
HD23 |
HD22 |
120.0 |
120.0 |