PDB Chemical Component MLE

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for MLE

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N CN 1.506 1.469
N CA 1.462 1.469
N H 1.000 1.008
CN HN1 1.100 1.090
CN HN2 1.100 1.090
CN HN3 1.100 1.090
CA CB 1.536 1.530
CA C 1.523 1.507
CA HA 1.100 1.091
CB CG 1.540 1.529
CB HB2 1.100 1.091
CB HB3 1.100 1.090
CG CD1 1.504 1.530
CG CD2 1.517 1.529
CG HG 1.100 1.090
CD1 HD11 1.100 1.090
CD1 HD12 1.100 1.090
CD1 HD13 1.100 1.091
CD2 HD21 1.100 1.090
CD2 HD22 1.100 1.090
CD2 HD23 1.100 1.090
C O 1.231 1.208
C OXT 1.329 1.342
OXT HXT 0.950 0.967

Bond Angles for MLE

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CN N CA 119.5 111.0
CN N H 106.3 111.0
N CN HN1 109.5 109.4
N CN HN2 109.5 109.5
N CN HN3 109.4 109.4
CA N H 106.2 111.0
N CA CB 106.5 109.5
N CA C 112.8 109.5
N CA HA 110.7 109.5
HN1 CN HN2 109.5 109.5
HN1 CN HN3 109.4 109.5
HN2 CN HN3 109.5 109.5
CB CA C 113.2 109.5
CB CA HA 110.2 109.4
CA CB CG 117.7 109.5
CA CB HB2 106.8 109.5
CA CB HB3 106.8 109.5
C CA HA 103.5 109.4
CA C O 122.6 120.0
CA C OXT 117.5 120.0
CG CB HB2 106.8 109.5
CG CB HB3 106.8 109.5
CB CG CD1 109.9 109.5
CB CG CD2 109.6 109.5
CB CG HG 110.1 109.5
HB2 CB HB3 112.0 109.5
CD1 CG CD2 112.4 109.5
CD1 CG HG 107.2 109.4
CG CD1 HD11 109.5 109.5
CG CD1 HD12 109.5 109.5
CG CD1 HD13 109.4 109.4
CD2 CG HG 107.5 109.5
CG CD2 HD21 109.5 109.5
CG CD2 HD22 109.5 109.5
CG CD2 HD23 109.4 109.5
HD11 CD1 HD12 109.5 109.5
HD11 CD1 HD13 109.5 109.5
HD12 CD1 HD13 109.5 109.5
HD21 CD2 HD22 109.4 109.5
HD21 CD2 HD23 109.5 109.4
HD22 CD2 HD23 109.5 109.4
O C OXT 119.9 120.0
C OXT HXT 109.5 117.0

Torsion Angles for MLE

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
CA N CN H 240.0 236.0
CN N CA CB 300.9 153.9
CN N CA C 65.6 274.0
CN N CA HA 181.1 34.0
HN1 CN N HN2 240.0 240.0
HN1 CN N HN3 120.0 120.0
HN2 CN N HN3 240.0 240.0
CN N CA H 120.0 124.0
CA N CN HN1 180.0 295.3
CA N CN HN2 300.0 55.3
CA N CN HN3 60.0 175.3
CB CA N C 235.3 239.9
CB CA N HA 119.8 119.9
N CA CB CG 304.2 294.4
N CA CB HB2 64.2 54.4
N CA CB HB3 184.2 174.3
C CA N HA 244.5 240.0
N CA C O 359.3 332.9
N CA C OXT 176.9 152.9
CN N H CA 231.7 236.0
H N CN HN1 300.0 59.3
H N CN HN2 60.0 179.3
H N CN HN3 180.0 299.3
H N CA CB 180.9 29.9
H N CA C 305.6 150.0
H N CA HA 61.1 270.0
HN1 CN N CA 180.0 295.3
HN1 CN N H 300.0 59.3
N CN HN1 HN2 120.0 120.0
N CN HN1 HN3 240.0 240.0
HN2 CN HN1 HN3 120.0 120.0
HN2 CN N CA 300.0 55.3
HN2 CN N H 60.0 179.3
N CN HN2 HN1 239.9 240.0
N CN HN2 HN3 120.0 120.0
HN1 CN HN2 HN3 240.0 240.0
HN3 CN N CA 60.0 175.3
HN3 CN N H 180.0 299.3
N CN HN3 HN1 120.0 120.0
N CN HN3 HN2 240.0 240.0
HN1 CN HN3 HN2 120.0 120.0
CB CA N H 180.9 29.9
N CA CB C 124.5 120.1
N CA CB HA 239.9 240.0
C CA CB HA 115.4 120.0
CB CA C O 120.3 92.9
CB CA C OXT 297.9 273.0
CG CB CA HB2 240.0 240.0
CG CB CA HB3 120.0 120.1
CA CB CG CD1 174.1 174.3
CA CB CG CD2 298.1 294.3
CA CB CG HG 56.2 54.4
HB2 CB CA HB3 240.0 240.0
C CA N H 305.6 150.0
N CA C CB 239.0 239.9
N CA C HA 119.7 120.0
CB CA C HA 240.7 240.1
C CA CB CG 179.7 174.3
C CA CB HB2 299.7 294.3
C CA CB HB3 59.7 54.3
O C CA OXT 182.4 179.9
CA C OXT HXT 182.3 180.0
HA CA N H 61.1 270.0
N CA HA CB 117.5 120.0
N CA HA C 238.9 240.0
CB CA HA C 121.4 120.0
HA CA CB CG 64.3 54.3
HA CA CB HB2 184.3 174.3
HA CA CB HB3 304.3 294.3
HA CA C O 239.6 212.9
HA CA C OXT 57.2 32.9
CG CB CA C 179.7 174.3
CG CB CA HA 64.3 54.3
CA CB CG HB2 120.0 120.0
CA CB CG HB3 240.0 240.0
HB2 CB CG HB3 120.0 120.0
CD1 CG CB CD2 236.0 240.0
CD1 CG CB HG 117.9 119.9
CB CG CD1 HD11 180.0 184.6
CB CG CD1 HD12 300.0 304.7
CB CG CD1 HD13 60.0 64.6
CD2 CG CB HG 241.9 240.0
CB CG CD2 HD21 180.0 60.0
CB CG CD2 HD22 300.0 180.0
CB CG CD2 HD23 60.0 300.0
HB2 CB CA C 299.7 294.3
HB2 CB CA HA 184.3 174.3
CA CB HB2 CG 233.2 240.0
CA CB HB2 HB3 116.6 120.0
CG CB HB2 HB3 243.4 240.0
HB2 CB CG CD1 54.1 54.3
HB2 CB CG CD2 178.1 174.4
HB2 CB CG HG 296.2 294.4
HB3 CB CA C 59.7 54.3
HB3 CB CA HA 304.3 294.3
CA CB HB3 CG 126.8 120.0
CA CB HB3 HB2 243.4 240.0
CG CB HB3 HB2 116.6 120.0
HB3 CB CG CD1 294.1 294.3
HB3 CB CG CD2 58.2 54.4
HB3 CB CG HG 176.2 174.4
CD1 CG CB HB2 54.1 54.3
CD1 CG CB HB3 294.1 294.3
CB CG CD1 CD2 122.4 120.1
CB CG CD1 HG 240.3 240.0
CD2 CG CD1 HG 117.9 119.9
CD1 CG CD2 HD21 302.6 180.0
CD1 CG CD2 HD22 62.5 300.1
CD1 CG CD2 HD23 182.6 60.1
HD11 CD1 CG HD12 240.0 239.9
HD11 CD1 CG HD13 120.0 120.0
HD12 CD1 CG HD13 240.0 240.0
CD2 CG CB HB2 178.1 174.4
CD2 CG CB HB3 58.2 54.4
CB CG CD2 CD1 237.4 239.9
CB CG CD2 HG 119.7 120.1
CD1 CG CD2 HG 242.2 240.1
CD2 CG CD1 HD11 57.6 64.5
CD2 CG CD1 HD12 177.6 184.6
CD2 CG CD1 HD13 297.6 304.5
HD21 CD2 CG HD22 240.0 239.9
HD21 CD2 CG HD23 120.0 120.0
HD22 CD2 CG HD23 240.0 240.0
HG CG CB HB2 296.2 294.4
HG CG CB HB3 176.2 174.4
CB CG HG CD1 119.6 120.0
CB CG HG CD2 240.6 239.9
CD1 CG HG CD2 121.1 119.9
HG CG CD1 HD11 299.7 304.6
HG CG CD1 HD12 59.7 64.6
HG CG CD1 HD13 179.7 184.6
HG CG CD2 HD21 60.3 299.9
HG CG CD2 HD22 180.3 60.0
HG CG CD2 HD23 300.3 179.9
HD11 CD1 CG CD2 57.6 64.5
HD11 CD1 CG HG 299.7 304.6
CG CD1 HD11 HD12 120.0 120.1
CG CD1 HD11 HD13 240.0 240.1
HD12 CD1 HD11 HD13 120.0 120.0
HD12 CD1 CG CD2 177.6 184.6
HD12 CD1 CG HG 59.7 64.6
CG CD1 HD12 HD11 240.0 239.9
CG CD1 HD12 HD13 120.0 119.9
HD11 CD1 HD12 HD13 240.0 240.0
HD13 CD1 CG CD2 297.6 304.5
HD13 CD1 CG HG 179.7 184.6
CG CD1 HD13 HD11 120.0 120.0
CG CD1 HD13 HD12 240.0 240.0
HD11 CD1 HD13 HD12 120.0 120.0
HD21 CD2 CG HG 60.3 299.9
CG CD2 HD21 HD22 120.0 120.1
CG CD2 HD21 HD23 240.0 240.0
HD22 CD2 HD21 HD23 120.0 119.9
HD22 CD2 CG HG 180.3 60.0
CG CD2 HD22 HD21 240.0 239.9
CG CD2 HD22 HD23 120.0 120.0
HD21 CD2 HD22 HD23 240.0 240.1
HD23 CD2 CG HG 300.3 179.9
CG CD2 HD23 HD21 120.0 120.0
CG CD2 HD23 HD22 240.0 239.9
HD21 CD2 HD23 HD22 120.0 119.9
O C CA HA 239.6 212.9
CA C O OXT 177.5 180.1
O C OXT HXT 360.0 0.0
OXT C CA HA 57.2 32.9
CA C OXT O 182.4 179.9